RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 C10orf71Q711Q0 1435 aa12.26□□□□□ -0.45
CHKA-207ENST00000533728 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
CHKA-207ENST00000533728 HTATSF1O43719 755 aaKnown RBP12.25□□□□□ -0.45
CHKA-207ENST00000533728 DDB1Q16531 1140 aa12.25□□□□□ -0.45
CHKA-207ENST00000533728 C8orf34Q49A92 452 aa12.25□□□□□ -0.45
CHKA-207ENST00000533728 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
CHKA-207ENST00000533728 PCDHB15Q9Y5E8 787 aa12.25□□□□□ -0.45
CHKA-207ENST00000533728 NFAT5O94916 1531 aa12.25□□□□□ -0.45
CHKA-207ENST00000533728 CPDO75976 1380 aa12.24□□□□□ -0.45
CHKA-207ENST00000533728 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
CHKA-207ENST00000533728 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
CHKA-207ENST00000533728 TNRC6CQ9HCJ0 1690 aaKnown RBP12.24□□□□□ -0.45
CHKA-207ENST00000533728 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
CHKA-207ENST00000533728 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
CHKA-207ENST00000533728 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
CHKA-207ENST00000533728 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
CHKA-207ENST00000533728 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
CHKA-207ENST00000533728 BCL2L13Q9BXK5 485 aa12.23□□□□□ -0.45
CHKA-207ENST00000533728 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
CHKA-207ENST00000533728 ZBTB40Q9NUA8 1239 aa12.23□□□□□ -0.45
CHKA-207ENST00000533728 ABCC4O15439 1325 aa12.22□□□□□ -0.45
CHKA-207ENST00000533728 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
CHKA-207ENST00000533728 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
CHKA-207ENST00000533728 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
CHKA-207ENST00000533728 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
CHKA-207ENST00000533728 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
CHKA-207ENST00000533728 API5Q9BZZ5 524 aaKnown RBP12.22□□□□□ -0.45
CHKA-207ENST00000533728 CRB1P82279 1406 aa12.21□□□□□ -0.45
CHKA-207ENST00000533728 CHL1O00533 1208 aa12.21□□□□□ -0.45
CHKA-207ENST00000533728 TWISTNBQ3B726 338 aaPredicted RBP12.21□□□□□ -0.45
CHKA-207ENST00000533728 GAS2L2Q8NHY3 880 aa12.21□□□□□ -0.45
CHKA-207ENST00000533728 BABAM1Q9NWV8 329 aa12.21□□□□□ -0.45
CHKA-207ENST00000533728 TNNQ9UQP3 1299 aa12.21□□□□□ -0.45
CHKA-207ENST00000533728 FAM208AQ9UK61 1670 aaKnown RBP12.21□□□□□ -0.45
CHKA-207ENST00000533728 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.46
CHKA-207ENST00000533728 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
CHKA-207ENST00000533728 HSPA8P11142 646 aaKnown RBP12.2□□□□□ -0.46
CHKA-207ENST00000533728 RGS3P49796 1198 aa12.2□□□□□ -0.46
CHKA-207ENST00000533728 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
CHKA-207ENST00000533728 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
CHKA-207ENST00000533728 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
CHKA-207ENST00000533728 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
CHKA-207ENST00000533728 MARCH10Q8NA82 808 aaPredicted RBP12.2□□□□□ -0.46
CHKA-207ENST00000533728 RRAGCQ9HB90 399 aa12.2□□□□□ -0.46
CHKA-207ENST00000533728 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
CHKA-207ENST00000533728 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
CHKA-207ENST00000533728 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
CHKA-207ENST00000533728 PKD1L3Q7Z443 1732 aa12.19□□□□□ -0.46
CHKA-207ENST00000533728 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
CHKA-207ENST00000533728 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 GCP02774 474 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 AMPHP49418 695 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 NLRP6P59044 892 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 AEBP1Q8IUX7 1158 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 KCNH5Q8NCM2 988 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 LRRC4BQ9NT99 713 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
CHKA-207ENST00000533728 PTPRCP08575 1304 aa12.17□□□□□ -0.46
CHKA-207ENST00000533728 BTAF1O14981 1849 aa12.17□□□□□ -0.46
CHKA-207ENST00000533728 HOXC9P31274 260 aa12.17□□□□□ -0.46
CHKA-207ENST00000533728 GCC1Q96CN9 775 aa12.17□□□□□ -0.46
CHKA-207ENST00000533728 THUMPD2Q9BTF0 503 aaKnown RBP12.17□□□□□ -0.46
CHKA-207ENST00000533728 WBP1LQ9NX94 342 aa12.17□□□□□ -0.46
CHKA-207ENST00000533728 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
CHKA-207ENST00000533728 NCAPD2Q15021 1401 aa12.17□□□□□ -0.46
CHKA-207ENST00000533728 PITPNM2Q9BZ72 1349 aa12.16□□□□□ -0.46
CHKA-207ENST00000533728 ZBTB7BO15156 539 aaPredicted RBP12.16□□□□□ -0.46
CHKA-207ENST00000533728 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
CHKA-207ENST00000533728 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
CHKA-207ENST00000533728 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
CHKA-207ENST00000533728 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
CHKA-207ENST00000533728 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
CHKA-207ENST00000533728 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
CHKA-207ENST00000533728 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
CHKA-207ENST00000533728 EYA1Q99502 592 aa12.15□□□□□ -0.46
CHKA-207ENST00000533728 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
CHKA-207ENST00000533728 IP6K1Q92551 441 aa12.14□□□□□ -0.47
CHKA-207ENST00000533728 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
CHKA-207ENST00000533728 SIPA1L3O60292 1781 aaPredicted RBP12.14□□□□□ -0.47
CHKA-207ENST00000533728 EIF5BO60841 1220 aaKnown RBP12.13□□□□□ -0.47
CHKA-207ENST00000533728 NUCB1Q02818 461 aa12.13□□□□□ -0.47
CHKA-207ENST00000533728 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
CHKA-207ENST00000533728 NUTM2GQ5VZR2 741 aa12.13□□□□□ -0.47
CHKA-207ENST00000533728 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
CHKA-207ENST00000533728 CHMP4AQ9BY43 222 aa12.13□□□□□ -0.47
CHKA-207ENST00000533728 CNTNAP1P78357 1384 aa12.13□□□□□ -0.47
CHKA-207ENST00000533728 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
CHKA-207ENST00000533728 COL5A2P05997 1499 aaPredicted RBP12.12□□□□□ -0.47
CHKA-207ENST00000533728 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
CHKA-207ENST00000533728 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
CHKA-207ENST00000533728 C9orf131Q5VYM1 1079 aa12.11□□□□□ -0.47
CHKA-207ENST00000533728 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
CHKA-207ENST00000533728 HABP4Q5JVS0 413 aaKnown RBP12.1□□□□□ -0.47
CHKA-207ENST00000533728 MCM10Q7L590 875 aa12.1□□□□□ -0.47
CHKA-207ENST00000533728 CEMIPQ8WUJ3 1361 aa12.09□□□□□ -0.47
CHKA-207ENST00000533728 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
CHKA-207ENST00000533728 CHD1LQ86WJ1 897 aa12.09□□□□□ -0.47
CHKA-207ENST00000533728 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
CHKA-207ENST00000533728 ACSBG1Q96GR2 724 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms