RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 CUL5Q93034 780 aa7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 RNF41Q9H4P4 317 aaPredicted RBP7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 WWC3Q9ULE0 1092 aa7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 TRIM21P19474 475 aaKnown RBP7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 LRRFIP2Q9Y608 721 aaKnown RBP7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 DHX29Q7Z478 1369 aaKnown RBP7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 NPHP3Q7Z494 1330 aa7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 CBFA2T2O43439 604 aa7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 FLIIQ13045 1269 aa7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 CWC25Q9NXE8 425 aaPredicted RBP7.48□□□□□ -1.21
UBQLN1-206ENST00000533705 MYO1BO43795 1136 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 ATP6V1AP38606 617 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 MAP3K2Q9Y2U5 619 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 ERLIN2O94905 339 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 CCDC184Q52MB2 194 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 CABP5Q9NP86 173 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 NCOA1Q15788 1441 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 ZNF213O14771 459 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 RARSP54136 660 aaKnown RBP7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 DDB1Q16531 1140 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 SPC24Q8NBT2 197 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 SPDYE4A6NLX3 237 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 PPP1R12BO60237 982 aaPredicted RBP7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 SNRPA1P09661 255 aaKnown RBP7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 NEFHP12036 1026 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 UBE3BQ7Z3V4 1068 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 SETDB2Q96T68 719 aa7.47□□□□□ -1.21
UBQLN1-206ENST00000533705 BAG3O95817 575 aa7.46□□□□□ -1.21
UBQLN1-206ENST00000533705 JARID2Q92833 1246 aaPredicted RBP7.46□□□□□ -1.21
UBQLN1-206ENST00000533705 NUP62CLQ9H1M0 184 aa7.46□□□□□ -1.21
UBQLN1-206ENST00000533705 SNRKQ9NRH2 765 aa7.46□□□□□ -1.21
UBQLN1-206ENST00000533705 NSD2O96028 1365 aa7.46□□□□□ -1.21
UBQLN1-206ENST00000533705 SLC4A8Q2Y0W8 1093 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC181Q5TID7 509 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 TRMT1LQ7Z2T5 733 aaKnown RBP7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 SLC12A7Q9Y666 1083 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 PTPRCP08575 1304 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 HMGB1P09429 215 aaKnown RBP7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 SSR1P43307 286 aaKnown RBP7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 HLA-DOAP06340 250 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 EIF5P55010 431 aaKnown RBP7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 NBPF14Q5TI25 921 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 CABLES1Q8TDN4 633 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 RAB34Q9BZG1 259 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 DNAI2Q9GZS0 605 aa7.46□□□□□ -1.22
UBQLN1-206ENST00000533705 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 BACH2Q9BYV9 841 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 UPF3BQ9BZI7 483 aaKnown RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 UBA5Q9GZZ9 404 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 CUL7Q14999 1698 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 IFIT3O14879 490 aaKnown RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 POLD1P28340 1107 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 SPTY2D1Q68D10 685 aaPredicted RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC83Q8IWF9 413 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 EHMT1Q9H9B1 1298 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 TFCP2L1Q9NZI6 479 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 SCAF11Q99590 1463 aaKnown RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 PCF11O94913 1555 aaKnown RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 POTEJP0CG39 1038 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 FERMT3Q86UX7 667 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 VAT1LQ9HCJ6 419 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 ANXA1P04083 346 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 LIG1P18858 919 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC152Q4G0S7 254 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 SMARCC1Q92922 1105 aaPredicted RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 CIZ1Q9ULV3 898 aaPredicted RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC194A0A1B0GVG4 234 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 CATIPQ7Z7H3 387 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 C8orf76Q96K31 380 aa7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 PHAXQ9H814 394 aaKnown RBP7.45□□□□□ -1.22
UBQLN1-206ENST00000533705 PI4KAP2A4QPH2 592 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 SMTNL1A8MU46 457 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 GOLIM4O00461 696 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 TMEM266Q2M3C6 531 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 OGFOD1Q8N543 542 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 PI4KAP1Q8N8J0 262 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 F8W031 263 aaPredicted RBP7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 FBLN1P23142 703 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 NLRP3Q96P20 1036 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 ECHDC1Q9NTX5 307 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 TTC21AQ8NDW8 1320 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 PTPN23Q9H3S7 1636 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 FAM83GA6ND36 823 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 GOLGA8AA7E2F4 631 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 GOLGA8BA8MQT2 603 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 NLRP5P59047 1200 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 ANKRD13DQ6ZTN6 518 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 C16orf71Q8IYS4 520 aaPredicted RBP7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 HDAC9Q9UKV0 1011 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 PIK3R4Q99570 1358 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 TSPY2A6NKD2 308 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 ANKRD18AQ8IVF6 992 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 SH2B1Q9NRF2 756 aaPredicted RBP7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 TEX14Q8IWB6 1497 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 ANKRD62A6NC57 917 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 PDE4BQ07343 736 aa7.44□□□□□ -1.22
UBQLN1-206ENST00000533705 UHRF1BP1LA0JNW5 1464 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 PPM1FP49593 454 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms