RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 DNAJC5GQ8N7S2 189 aa15.16■□□□□ 0.02
CLCF1-202ENST00000533438 WWC3Q9ULE0 1092 aa15.16■□□□□ 0.02
CLCF1-202ENST00000533438 ZBTB1Q9Y2K1 713 aa15.16■□□□□ 0.02
CLCF1-202ENST00000533438 NRXN2Q9P2S2 1712 aa15.16■□□□□ 0.02
CLCF1-202ENST00000533438 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
CLCF1-202ENST00000533438 COL15A1P39059 1388 aa15.15■□□□□ 0.02
CLCF1-202ENST00000533438 TEFQ10587 303 aa15.15■□□□□ 0.02
CLCF1-202ENST00000533438 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
CLCF1-202ENST00000533438 TM4SF1P30408 202 aa15.14■□□□□ 0.01
CLCF1-202ENST00000533438 DDR1Q08345 913 aa15.14■□□□□ 0.01
CLCF1-202ENST00000533438 USPL1Q5W0Q7 1092 aa15.14■□□□□ 0.01
CLCF1-202ENST00000533438 ZNF790Q6PG37 636 aa15.14■□□□□ 0.01
CLCF1-202ENST00000533438 TTC5Q8N0Z6 440 aa15.14■□□□□ 0.01
CLCF1-202ENST00000533438 HEG1Q9ULI3 1381 aa15.13■□□□□ 0.01
CLCF1-202ENST00000533438 A0A0G2JLW4 131 aa15.13■□□□□ 0.01
CLCF1-202ENST00000533438 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
CLCF1-202ENST00000533438 TOMM70O94826 608 aa15.13■□□□□ 0.01
CLCF1-202ENST00000533438 FCHSD2O94868 740 aa15.13■□□□□ 0.01
CLCF1-202ENST00000533438 ZNF496Q96IT1 587 aaPredicted RBP15.13■□□□□ 0.01
CLCF1-202ENST00000533438 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
CLCF1-202ENST00000533438 DLG5Q8TDM6 1919 aa15.13■□□□□ 0.01
CLCF1-202ENST00000533438 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
CLCF1-202ENST00000533438 ZPR1O75312 459 aa15.12■□□□□ 0.01
CLCF1-202ENST00000533438 U2AF1L5P0DN76 240 aaPredicted RBP15.12■□□□□ 0.01
CLCF1-202ENST00000533438 DPEP1P16444 411 aa15.12■□□□□ 0.01
CLCF1-202ENST00000533438 KCNA3P22001 575 aa15.12■□□□□ 0.01
CLCF1-202ENST00000533438 APLP1P51693 650 aa15.12■□□□□ 0.01
CLCF1-202ENST00000533438 U2AF1Q01081 240 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLCF1-202ENST00000533438 BCL2L12Q9HB09 334 aa15.11■□□□□ 0.01
CLCF1-202ENST00000533438 STARD3NLO95772 234 aa15.1■□□□□ 0.01
CLCF1-202ENST00000533438 EIF5P55010 431 aaKnown RBP15.1■□□□□ 0.01
CLCF1-202ENST00000533438 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
CLCF1-202ENST00000533438 TEX13AQ9BXU3 409 aaPredicted RBP15.1■□□□□ 0.01
CLCF1-202ENST00000533438 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
CLCF1-202ENST00000533438 DLEC1Q9Y238 1755 aa15.1■□□□□ 0.01
CLCF1-202ENST00000533438 BCORQ6W2J9 1755 aa15.09■□□□□ 0.01
CLCF1-202ENST00000533438 BTBD11A6QL63 1104 aa15.09■□□□□ 0.01
CLCF1-202ENST00000533438 CANXP27824 592 aaKnown RBP15.09■□□□□ 0.01
CLCF1-202ENST00000533438 NFIXQ14938 502 aa15.09■□□□□ 0.01
CLCF1-202ENST00000533438 FMNL2Q96PY5 1086 aa15.09■□□□□ 0.01
CLCF1-202ENST00000533438 KCNQ3O43525 872 aa15.08■□□□□ 0
CLCF1-202ENST00000533438 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
CLCF1-202ENST00000533438 MCM10Q7L590 875 aa15.07■□□□□ 0
CLCF1-202ENST00000533438 RTF1Q92541 710 aaKnown RBP15.07■□□□□ 0
CLCF1-202ENST00000533438 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
CLCF1-202ENST00000533438 A0A087WZG4 1122 aa15.06■□□□□ 0
CLCF1-202ENST00000533438 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
CLCF1-202ENST00000533438 IL6STP40189 918 aaPredicted RBP15.06■□□□□ 0
CLCF1-202ENST00000533438 PIM2Q9P1W9 311 aa15.06■□□□□ 0
CLCF1-202ENST00000533438 KDM3BQ7LBC6 1761 aa15.06■□□□□ 0
CLCF1-202ENST00000533438 SBF1O95248 1867 aa15.06■□□□□ 0
CLCF1-202ENST00000533438 CHRNA5P30532 468 aa15.05■□□□□ -0
CLCF1-202ENST00000533438 DCTN1Q14203 1278 aa15.05■□□□□ -0
CLCF1-202ENST00000533438 RBM46Q8TBY0 533 aaKnown RBP15.05■□□□□ -0
CLCF1-202ENST00000533438 PLEKHF1Q96S99 279 aa15.05■□□□□ -0
CLCF1-202ENST00000533438 USP16Q9Y5T5 823 aa15.05■□□□□ -0
CLCF1-202ENST00000533438 LAMB4A4D0S4 1761 aa15.05■□□□□ -0
CLCF1-202ENST00000533438 A1BGP04217 495 aa15.04■□□□□ -0
CLCF1-202ENST00000533438 SERPINB2P05120 415 aa15.04■□□□□ -0
CLCF1-202ENST00000533438 CARMIL3Q8ND23 1372 aa15.03■□□□□ -0
CLCF1-202ENST00000533438 PRAMEF22A3QJZ6 481 aa15.03■□□□□ -0
CLCF1-202ENST00000533438 DALRD3Q5D0E6 543 aaKnown RBP15.03■□□□□ -0
CLCF1-202ENST00000533438 TBC1D9BQ66K14 1250 aa15.03■□□□□ -0
CLCF1-202ENST00000533438 ARHGAP27Q6ZUM4 889 aa15.03■□□□□ -0
CLCF1-202ENST00000533438 JMYQ8N9B5 988 aa15.03■□□□□ -0
CLCF1-202ENST00000533438 FSTL1Q12841 308 aa15.02■□□□□ -0
CLCF1-202ENST00000533438 NMRK2Q9NPI5 230 aa15.02■□□□□ -0
CLCF1-202ENST00000533438 TBC1D2BQ9UPU7 963 aa15.02■□□□□ -0
CLCF1-202ENST00000533438 ZNF330Q9Y3S2 320 aaPredicted RBP15.02■□□□□ -0
CLCF1-202ENST00000533438 COL11A2P13942 1736 aaPredicted RBP15.01□□□□□ -0.01
CLCF1-202ENST00000533438 CAMTA2O94983 1202 aa15.01□□□□□ -0.01
CLCF1-202ENST00000533438 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
CLCF1-202ENST00000533438 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
CLCF1-202ENST00000533438 BICDL1Q6ZP65 573 aa15.01□□□□□ -0.01
CLCF1-202ENST00000533438 NEFMP07197 916 aa15□□□□□ -0.01
CLCF1-202ENST00000533438 RALBP1Q15311 655 aa15□□□□□ -0.01
CLCF1-202ENST00000533438 PIP4K2AP48426 406 aaPredicted RBP14.99□□□□□ -0.01
CLCF1-202ENST00000533438 NFE2L2Q16236 605 aa14.99□□□□□ -0.01
CLCF1-202ENST00000533438 C9orf131Q5VYM1 1079 aa14.99□□□□□ -0.01
CLCF1-202ENST00000533438 DZIP3Q86Y13 1208 aaKnown RBP14.99□□□□□ -0.01
CLCF1-202ENST00000533438 CCDC88AQ3V6T2 1871 aa14.98□□□□□ -0.01
CLCF1-202ENST00000533438 PRR5LQ6MZQ0 368 aa14.98□□□□□ -0.01
CLCF1-202ENST00000533438 NPM2Q86SE8 214 aaKnown RBP14.98□□□□□ -0.01
CLCF1-202ENST00000533438 KLRG1Q96E93 195 aa14.98□□□□□ -0.01
CLCF1-202ENST00000533438 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
CLCF1-202ENST00000533438 PCNTO95613 3336 aa14.98□□□□□ -0.01
CLCF1-202ENST00000533438 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
CLCF1-202ENST00000533438 NBPF26B4DH59 902 aa14.97□□□□□ -0.01
CLCF1-202ENST00000533438 NBPF10Q6P3W6 841 aaKnown RBP14.97□□□□□ -0.01
CLCF1-202ENST00000533438 C2CD5Q86YS7 1000 aa14.97□□□□□ -0.01
CLCF1-202ENST00000533438 NBPF15Q8N660 670 aa14.97□□□□□ -0.01
CLCF1-202ENST00000533438 MIS18AQ9NYP9 233 aa14.97□□□□□ -0.01
CLCF1-202ENST00000533438 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
CLCF1-202ENST00000533438 ZC3H4Q9UPT8 1303 aaKnown RBP14.96□□□□□ -0.01
CLCF1-202ENST00000533438 H0YIN7 160 aa14.96□□□□□ -0.01
CLCF1-202ENST00000533438 DDX10Q13206 875 aaKnown RBP14.96□□□□□ -0.01
CLCF1-202ENST00000533438 CLEC4GQ6UXB4 293 aa14.96□□□□□ -0.01
CLCF1-202ENST00000533438 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
CLCF1-202ENST00000533438 PNISRQ8TF01 805 aaKnown RBP14.96□□□□□ -0.01
CLCF1-202ENST00000533438 SETDB2Q96T68 719 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms