RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 COL15A1P39059 1388 aa20.26■□□□□ 0.83
GSDMD-213ENST00000533348 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
GSDMD-213ENST00000533348 KCNA3P22001 575 aa20.26■□□□□ 0.83
GSDMD-213ENST00000533348 USPL1Q5W0Q7 1092 aa20.26■□□□□ 0.83
GSDMD-213ENST00000533348 NRXN2Q9P2S2 1712 aa20.25■□□□□ 0.83
GSDMD-213ENST00000533348 POLRMTO00411 1230 aaKnown RBP20.25■□□□□ 0.83
GSDMD-213ENST00000533348 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
GSDMD-213ENST00000533348 ZBTB1Q9Y2K1 713 aa20.25■□□□□ 0.83
GSDMD-213ENST00000533348 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
GSDMD-213ENST00000533348 FCHSD2O94868 740 aa20.24■□□□□ 0.83
GSDMD-213ENST00000533348 STARD3NLO95772 234 aa20.24■□□□□ 0.83
GSDMD-213ENST00000533348 PPP2R1AP30153 589 aa20.24■□□□□ 0.83
GSDMD-213ENST00000533348 ZNF790Q6PG37 636 aa20.24■□□□□ 0.83
GSDMD-213ENST00000533348 TEX13AQ9BXU3 409 aaPredicted RBP20.24■□□□□ 0.83
GSDMD-213ENST00000533348 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
GSDMD-213ENST00000533348 PIM2Q9P1W9 311 aa20.24■□□□□ 0.83
GSDMD-213ENST00000533348 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
GSDMD-213ENST00000533348 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
GSDMD-213ENST00000533348 HEG1Q9ULI3 1381 aa20.22■□□□□ 0.83
GSDMD-213ENST00000533348 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
GSDMD-213ENST00000533348 ARHGAP27Q6ZUM4 889 aa20.21■□□□□ 0.83
GSDMD-213ENST00000533348 DLEC1Q9Y238 1755 aa20.21■□□□□ 0.83
GSDMD-213ENST00000533348 SBF1O95248 1867 aa20.2■□□□□ 0.82
GSDMD-213ENST00000533348 A0A087WZG4 1122 aa20.2■□□□□ 0.82
GSDMD-213ENST00000533348 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
GSDMD-213ENST00000533348 EIF5P55010 431 aaKnown RBP20.2■□□□□ 0.82
GSDMD-213ENST00000533348 NFIXQ14938 502 aa20.2■□□□□ 0.82
GSDMD-213ENST00000533348 ZNF526Q8TF50 670 aaPredicted RBP20.2■□□□□ 0.82
GSDMD-213ENST00000533348 BCL2L12Q9HB09 334 aa20.2■□□□□ 0.82
GSDMD-213ENST00000533348 DALRD3Q5D0E6 543 aaKnown RBP20.19■□□□□ 0.82
GSDMD-213ENST00000533348 FMNL2Q96PY5 1086 aa20.19■□□□□ 0.82
GSDMD-213ENST00000533348 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
GSDMD-213ENST00000533348 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
GSDMD-213ENST00000533348 SCN7AQ01118 1682 aa20.17■□□□□ 0.82
GSDMD-213ENST00000533348 BTBD11A6QL63 1104 aa20.17■□□□□ 0.82
GSDMD-213ENST00000533348 CHRNA5P30532 468 aa20.17■□□□□ 0.82
GSDMD-213ENST00000533348 SERPINB2P05120 415 aa20.16■□□□□ 0.82
GSDMD-213ENST00000533348 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
GSDMD-213ENST00000533348 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
GSDMD-213ENST00000533348 RTF1Q92541 710 aaKnown RBP20.15■□□□□ 0.82
GSDMD-213ENST00000533348 KIF3CO14782 793 aa20.14■□□□□ 0.81
GSDMD-213ENST00000533348 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
GSDMD-213ENST00000533348 ANKRD31Q8N7Z5 1873 aa20.13■□□□□ 0.81
GSDMD-213ENST00000533348 KCNQ3O43525 872 aa20.13■□□□□ 0.81
GSDMD-213ENST00000533348 BCORQ6W2J9 1755 aa20.13■□□□□ 0.81
GSDMD-213ENST00000533348 CCDC88AQ3V6T2 1871 aa20.12■□□□□ 0.81
GSDMD-213ENST00000533348 C9orf131Q5VYM1 1079 aa20.12■□□□□ 0.81
GSDMD-213ENST00000533348 A1BGP04217 495 aa20.11■□□□□ 0.81
GSDMD-213ENST00000533348 MCM10Q7L590 875 aa20.11■□□□□ 0.81
GSDMD-213ENST00000533348 NPM2Q86SE8 214 aaKnown RBP20.11■□□□□ 0.81
GSDMD-213ENST00000533348 TBC1D2BQ9UPU7 963 aa20.11■□□□□ 0.81
GSDMD-213ENST00000533348 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
GSDMD-213ENST00000533348 BICDL1Q6ZP65 573 aa20.1■□□□□ 0.81
GSDMD-213ENST00000533348 H0YIN7 160 aa20.09■□□□□ 0.81
GSDMD-213ENST00000533348 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
GSDMD-213ENST00000533348 HSPA6P17066 643 aa20.09■□□□□ 0.81
GSDMD-213ENST00000533348 PDZRN3Q9UPQ7 1066 aa20.09■□□□□ 0.81
GSDMD-213ENST00000533348 ZNF330Q9Y3S2 320 aaPredicted RBP20.09■□□□□ 0.81
GSDMD-213ENST00000533348 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
GSDMD-213ENST00000533348 C2CD5Q86YS7 1000 aa20.08■□□□□ 0.81
GSDMD-213ENST00000533348 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
GSDMD-213ENST00000533348 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.8
GSDMD-213ENST00000533348 CAMTA2O94983 1202 aa20.07■□□□□ 0.8
GSDMD-213ENST00000533348 NEFMP07197 916 aa20.07■□□□□ 0.8
GSDMD-213ENST00000533348 DCTN1Q14203 1278 aa20.07■□□□□ 0.8
GSDMD-213ENST00000533348 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
GSDMD-213ENST00000533348 RNF181Q9P0P0 153 aa20.07■□□□□ 0.8
GSDMD-213ENST00000533348 TOMM70O94826 608 aa20.06■□□□□ 0.8
GSDMD-213ENST00000533348 DZIP3Q86Y13 1208 aaKnown RBP20.06■□□□□ 0.8
GSDMD-213ENST00000533348 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
GSDMD-213ENST00000533348 BRIP1Q9BX63 1249 aa20.06■□□□□ 0.8
GSDMD-213ENST00000533348 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
GSDMD-213ENST00000533348 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
GSDMD-213ENST00000533348 COL11A2P13942 1736 aaPredicted RBP20.05■□□□□ 0.8
GSDMD-213ENST00000533348 PDE6BP35913 854 aa20.05■□□□□ 0.8
GSDMD-213ENST00000533348 PRR5LQ6MZQ0 368 aa20.05■□□□□ 0.8
GSDMD-213ENST00000533348 NMRK2Q9NPI5 230 aa20.05■□□□□ 0.8
GSDMD-213ENST00000533348 TNRC6CQ9HCJ0 1690 aaKnown RBP20.05■□□□□ 0.8
GSDMD-213ENST00000533348 DICER1Q9UPY3 1922 aaKnown RBP20.04■□□□□ 0.8
GSDMD-213ENST00000533348 PRAMEF22A3QJZ6 481 aa20.04■□□□□ 0.8
GSDMD-213ENST00000533348 CLEC4GQ6UXB4 293 aa20.04■□□□□ 0.8
GSDMD-213ENST00000533348 PLEKHF1Q96S99 279 aa20.04■□□□□ 0.8
GSDMD-213ENST00000533348 KDM2BQ8NHM5 1336 aa20.03■□□□□ 0.8
GSDMD-213ENST00000533348 ZC3H4Q9UPT8 1303 aaKnown RBP20.03■□□□□ 0.8
GSDMD-213ENST00000533348 CACNA1SQ13698 1873 aa20.03■□□□□ 0.8
GSDMD-213ENST00000533348 FER1L6Q2WGJ9 1857 aa20.03■□□□□ 0.8
GSDMD-213ENST00000533348 RGL2O15211 777 aa20.03■□□□□ 0.8
GSDMD-213ENST00000533348 PNNQ9H307 717 aaKnown RBP20.03■□□□□ 0.8
GSDMD-213ENST00000533348 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
GSDMD-213ENST00000533348 CEP350Q5VT06 3117 aa20.02■□□□□ 0.8
GSDMD-213ENST00000533348 LMNB1P20700 586 aa20.02■□□□□ 0.8
GSDMD-213ENST00000533348 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
GSDMD-213ENST00000533348 RASSF7Q02833 373 aa20.01■□□□□ 0.79
GSDMD-213ENST00000533348 CNBD1Q8NA66 436 aa20.01■□□□□ 0.79
GSDMD-213ENST00000533348 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
GSDMD-213ENST00000533348 ZNF652Q9Y2D9 606 aa20.01■□□□□ 0.79
GSDMD-213ENST00000533348 TIAM2Q8IVF5 1701 aa20■□□□□ 0.79
GSDMD-213ENST00000533348 NBPF26B4DH59 902 aa20■□□□□ 0.79
GSDMD-213ENST00000533348 NFE2L2Q16236 605 aa20■□□□□ 0.79
GSDMD-213ENST00000533348 NBPF10Q6P3W6 841 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms