RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 CDK5RAP3Q96JB5 506 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 PRKRIP1Q9H875 184 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 MRFAP1Q9Y605 127 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 ADGRL2O95490 1459 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 SLC3A2P08195 630 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 ATP2B1P20020 1258 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 SART3Q15020 963 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 TOM1L2Q6ZVM7 507 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 RIMS2Q9UQ26 1411 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 PTPRKQ15262 1439 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 ADGRF5Q8IZF2 1346 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 GOLGA6L9A6NEM1 432 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 ATP2C2O75185 946 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 TTC39AQ5SRH9 613 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 LNPKQ9C0E8 428 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 ECM2O94769 699 aaPredicted RBP8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 NOLC1Q14978 699 aaKnown RBP eCLIP8.11□□□□□ -1.115e-7■■□□□ 13.4
TGFBR3-210ENST00000533089 TAX1BP1Q86VP1 789 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 GBP3Q9H0R5 595 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 NINLQ9Y2I6 1382 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 HSPA4P34932 840 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 PLEKHO1Q53GL0 409 aaPredicted RBP8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 GTF3C6Q969F1 213 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 NUDT16Q96DE0 195 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 KRT18P05783 430 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 TATP17735 454 aaPredicted RBP8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 CEP83Q9Y592 693 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 CLASP1Q7Z460 1538 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 CCDC192P0DO97 292 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 OLFM4Q6UX06 510 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 SPATA24Q86W54 205 aa8.11□□□□□ -1.11
TGFBR3-210ENST00000533089 CABP4P57796 275 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 JAKMIP3Q5VZ66 844 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 FAM114A1Q8IWE2 563 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 ZNF830Q96NB3 372 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 RPRD2Q5VT52 1461 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 MSH6P52701 1360 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 URI1O94763 535 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 CNTROBQ8N137 903 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 KCNH5Q8NCM2 988 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 GNL3LQ9NVN8 582 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 PHF8Q9UPP1 1060 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 DHX8Q14562 1220 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 ZKSCAN5Q9Y2L8 839 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 PAXBP1Q9Y5B6 917 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 TOM1O60784 492 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 CCDC172P0C7W6 258 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 CCDC30Q5VVM6 783 aa8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 ZNF513Q8N8E2 541 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 V9GYY5 206 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-210ENST00000533089 MAGI3Q5TCQ9 1506 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 CCDC181Q5TID7 509 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 PRDM11Q9NQV5 511 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 KIF5BP33176 963 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 HSPA2P54652 639 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 GIGYF2Q6Y7W6 1299 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 WAPLQ7Z5K2 1190 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 ZBTB22O15209 634 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 MSL1Q68DK7 614 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 MLH3Q9UHC1 1453 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 WASLO00401 505 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 ZSCAN29Q8IWY8 852 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 USP25Q9UHP3 1055 aa8.09□□□□□ -1.11
TGFBR3-210ENST00000533089 SURF6O75683 361 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 GRM1Q13255 1194 aa8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 SEPT7Q16181 437 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 BICDL1Q6ZP65 573 aa8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 ZMAT2Q96NC0 199 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 TRMT1Q9NXH9 659 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 RAI14Q9P0K7 980 aa8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 SCAF11Q99590 1463 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-210ENST00000533089 DNMT1P26358 1616 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 FRMD3A2A2Y4 597 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 WDR78Q5VTH9 848 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 OTUD6BQ8N6M0 293 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 GAS2L2Q8NHY3 880 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 PSMA5P28066 241 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 SYCP1Q15431 976 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 CCDC158Q5M9N0 1113 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 FMNL2Q96PY5 1086 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 SLC12A5Q9H2X9 1139 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 VPS18Q9P253 973 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 ERLIN2O94905 339 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 DAAM2Q86T65 1068 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 ARHGEF5Q12774 1597 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 EBAG9O00559 213 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 CA8P35219 290 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 CALR3Q96L12 384 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 MYL6BP14649 208 aa8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 HMGB2P26583 209 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-210ENST00000533089 TERF1P54274 439 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms