RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 FCHSD2O94868 740 aa12.58□□□□□ -0.4
VPS26B-207ENST00000532160 HMOX1P09601 288 aa12.58□□□□□ -0.4
VPS26B-207ENST00000532160 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
VPS26B-207ENST00000532160 INTS5Q6P9B9 1019 aaKnown RBP12.58□□□□□ -0.4
VPS26B-207ENST00000532160 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
VPS26B-207ENST00000532160 ANP32CO43423 234 aa12.57□□□□□ -0.4
VPS26B-207ENST00000532160 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
VPS26B-207ENST00000532160 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
VPS26B-207ENST00000532160 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
VPS26B-207ENST00000532160 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
VPS26B-207ENST00000532160 AFDNP55196 1824 aaKnown RBP12.56□□□□□ -0.4
VPS26B-207ENST00000532160 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
VPS26B-207ENST00000532160 RALBP1Q15311 655 aa12.56□□□□□ -0.4
VPS26B-207ENST00000532160 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
VPS26B-207ENST00000532160 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
VPS26B-207ENST00000532160 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
VPS26B-207ENST00000532160 CHRNA5P30532 468 aa12.55□□□□□ -0.4
VPS26B-207ENST00000532160 UBR2Q8IWV8 1755 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
VPS26B-207ENST00000532160 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
VPS26B-207ENST00000532160 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 NMRK2Q9NPI5 230 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 PIM2Q9P1W9 311 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 SBF1O95248 1867 aa12.54□□□□□ -0.4
VPS26B-207ENST00000532160 TM4SF1P30408 202 aa12.53□□□□□ -0.4
VPS26B-207ENST00000532160 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
VPS26B-207ENST00000532160 COL15A1P39059 1388 aa12.53□□□□□ -0.4
VPS26B-207ENST00000532160 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
VPS26B-207ENST00000532160 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
VPS26B-207ENST00000532160 DIAPH1O60610 1272 aaKnown RBP12.52□□□□□ -0.41
VPS26B-207ENST00000532160 ZPR1O75312 459 aa12.52□□□□□ -0.41
VPS26B-207ENST00000532160 NFIXQ14938 502 aa12.52□□□□□ -0.41
VPS26B-207ENST00000532160 CCDC184Q52MB2 194 aa12.52□□□□□ -0.41
VPS26B-207ENST00000532160 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
VPS26B-207ENST00000532160 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
VPS26B-207ENST00000532160 TOMM70O94826 608 aa12.51□□□□□ -0.41
VPS26B-207ENST00000532160 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
VPS26B-207ENST00000532160 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
VPS26B-207ENST00000532160 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
VPS26B-207ENST00000532160 IFFO2Q5TF58 517 aa12.5□□□□□ -0.41
VPS26B-207ENST00000532160 MIER1Q8N108 512 aa12.5□□□□□ -0.41
VPS26B-207ENST00000532160 RNF181Q9P0P0 153 aa12.5□□□□□ -0.41
VPS26B-207ENST00000532160 SIPA1L3O60292 1781 aaPredicted RBP12.5□□□□□ -0.41
VPS26B-207ENST00000532160 CARMIL3Q8ND23 1372 aa12.49□□□□□ -0.41
VPS26B-207ENST00000532160 APLP1P51693 650 aa12.49□□□□□ -0.41
VPS26B-207ENST00000532160 RASSF7Q02833 373 aa12.49□□□□□ -0.41
VPS26B-207ENST00000532160 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
VPS26B-207ENST00000532160 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
VPS26B-207ENST00000532160 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
VPS26B-207ENST00000532160 PCNTO95613 3336 aa12.48□□□□□ -0.41
VPS26B-207ENST00000532160 WDR90Q96KV7 1748 aa12.48□□□□□ -0.41
VPS26B-207ENST00000532160 CCDC88AQ3V6T2 1871 aa12.47□□□□□ -0.41
VPS26B-207ENST00000532160 ANKRD31Q8N7Z5 1873 aa12.47□□□□□ -0.41
VPS26B-207ENST00000532160 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
VPS26B-207ENST00000532160 SERPINB2P05120 415 aa12.47□□□□□ -0.41
VPS26B-207ENST00000532160 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
VPS26B-207ENST00000532160 ZNF496Q96IT1 587 aaPredicted RBP12.47□□□□□ -0.41
VPS26B-207ENST00000532160 SCN7AQ01118 1682 aa12.47□□□□□ -0.41
VPS26B-207ENST00000532160 TNRC6CQ9HCJ0 1690 aaKnown RBP12.47□□□□□ -0.41
VPS26B-207ENST00000532160 PRELPP51888 382 aa12.46□□□□□ -0.41
VPS26B-207ENST00000532160 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
VPS26B-207ENST00000532160 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
VPS26B-207ENST00000532160 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
VPS26B-207ENST00000532160 DNAJC5GQ8N7S2 189 aa12.46□□□□□ -0.41
VPS26B-207ENST00000532160 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
VPS26B-207ENST00000532160 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
VPS26B-207ENST00000532160 STARD3NLO95772 234 aa12.45□□□□□ -0.42
VPS26B-207ENST00000532160 HTRA3P83110 453 aa12.45□□□□□ -0.42
VPS26B-207ENST00000532160 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
VPS26B-207ENST00000532160 RRAGCQ9HB90 399 aa12.45□□□□□ -0.42
VPS26B-207ENST00000532160 MRS2Q9HD23 443 aa12.45□□□□□ -0.42
VPS26B-207ENST00000532160 COL11A2P13942 1736 aaPredicted RBP12.45□□□□□ -0.42
VPS26B-207ENST00000532160 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
VPS26B-207ENST00000532160 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
VPS26B-207ENST00000532160 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
VPS26B-207ENST00000532160 TEFQ10587 303 aa12.44□□□□□ -0.42
VPS26B-207ENST00000532160 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
VPS26B-207ENST00000532160 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
VPS26B-207ENST00000532160 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
VPS26B-207ENST00000532160 TTLL6Q8N841 843 aa12.44□□□□□ -0.42
VPS26B-207ENST00000532160 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
VPS26B-207ENST00000532160 KCNQ3O43525 872 aa12.43□□□□□ -0.42
VPS26B-207ENST00000532160 U2AF1L5P0DN76 240 aaPredicted RBP12.43□□□□□ -0.42
VPS26B-207ENST00000532160 U2AF1Q01081 240 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS26B-207ENST00000532160 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
VPS26B-207ENST00000532160 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
VPS26B-207ENST00000532160 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
VPS26B-207ENST00000532160 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
VPS26B-207ENST00000532160 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
VPS26B-207ENST00000532160 A0A087WZG4 1122 aa12.42□□□□□ -0.42
VPS26B-207ENST00000532160 NFKBIEO00221 500 aa12.42□□□□□ -0.42
VPS26B-207ENST00000532160 LMNB1P20700 586 aa12.42□□□□□ -0.42
VPS26B-207ENST00000532160 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
VPS26B-207ENST00000532160 NUDCQ9Y266 331 aa12.42□□□□□ -0.42
VPS26B-207ENST00000532160 BCORQ6W2J9 1755 aa12.42□□□□□ -0.42
VPS26B-207ENST00000532160 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
VPS26B-207ENST00000532160 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms