RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 ZPR1O75312 459 aa28.5■■■□□ 2.15
FDFT1-220ENST00000531733 BCL2L12Q9HB09 334 aa28.5■■■□□ 2.15
FDFT1-220ENST00000531733 AFDNP55196 1824 aaKnown RBP28.5■■■□□ 2.15
FDFT1-220ENST00000531733 COL15A1P39059 1388 aa28.49■■■□□ 2.15
FDFT1-220ENST00000531733 COL3A1P02461 1466 aaPredicted RBP28.48■■■□□ 2.15
FDFT1-220ENST00000531733 UBR2Q8IWV8 1755 aa28.48■■■□□ 2.15
FDFT1-220ENST00000531733 NFIXQ14938 502 aa28.48■■■□□ 2.15
FDFT1-220ENST00000531733 TOMM70O94826 608 aa28.47■■■□□ 2.15
FDFT1-220ENST00000531733 CNGB1Q14028 1251 aaPredicted RBP28.47■■■□□ 2.15
FDFT1-220ENST00000531733 IFFO2Q5TF58 517 aa28.47■■■□□ 2.15
FDFT1-220ENST00000531733 NARFQ9UHQ1 456 aa28.47■■■□□ 2.15
FDFT1-220ENST00000531733 NRXN2Q9P2S2 1712 aa28.46■■■□□ 2.15
FDFT1-220ENST00000531733 SBF1O95248 1867 aa28.44■■■□□ 2.14
FDFT1-220ENST00000531733 RNF181Q9P0P0 153 aa28.44■■■□□ 2.14
FDFT1-220ENST00000531733 CANXP27824 592 aaKnown RBP28.42■■■□□ 2.14
FDFT1-220ENST00000531733 VSIG10Q8N0Z9 540 aa28.42■■■□□ 2.14
FDFT1-220ENST00000531733 CARMIL3Q8ND23 1372 aa28.41■■■□□ 2.14
FDFT1-220ENST00000531733 RASSF7Q02833 373 aa28.41■■■□□ 2.14
FDFT1-220ENST00000531733 IL17REQ8NFR9 667 aa28.41■■■□□ 2.14
FDFT1-220ENST00000531733 SERPINB2P05120 415 aa28.4■■■□□ 2.14
FDFT1-220ENST00000531733 APLP1P51693 650 aa28.4■■■□□ 2.14
FDFT1-220ENST00000531733 PRELPP51888 382 aa28.39■■■□□ 2.14
FDFT1-220ENST00000531733 DNAJC5GQ8N7S2 189 aa28.39■■■□□ 2.14
FDFT1-220ENST00000531733 DLEC1Q9Y238 1755 aa28.38■■■□□ 2.13
FDFT1-220ENST00000531733 U2SURPO15042 1029 aaKnown RBP28.38■■■□□ 2.13
FDFT1-220ENST00000531733 ZNF496Q96IT1 587 aaPredicted RBP28.38■■■□□ 2.13
FDFT1-220ENST00000531733 SIPA1L3O60292 1781 aaPredicted RBP28.37■■■□□ 2.13
FDFT1-220ENST00000531733 EIF5P55010 431 aaKnown RBP28.37■■■□□ 2.13
FDFT1-220ENST00000531733 HTRA3P83110 453 aa28.36■■■□□ 2.13
FDFT1-220ENST00000531733 BICDL1Q6ZP65 573 aa28.36■■■□□ 2.13
FDFT1-220ENST00000531733 RBM46Q8TBY0 533 aaKnown RBP28.36■■■□□ 2.13
FDFT1-220ENST00000531733 RRAGCQ9HB90 399 aa28.36■■■□□ 2.13
FDFT1-220ENST00000531733 NPC1L1Q9UHC9 1359 aa28.36■■■□□ 2.13
FDFT1-220ENST00000531733 TTC5Q8N0Z6 440 aa28.35■■■□□ 2.13
FDFT1-220ENST00000531733 WDR90Q96KV7 1748 aa28.33■■■□□ 2.13
FDFT1-220ENST00000531733 GNAT3A8MTJ3 354 aa28.33■■■□□ 2.13
FDFT1-220ENST00000531733 TBC1D9BQ66K14 1250 aa28.33■■■□□ 2.13
FDFT1-220ENST00000531733 ZNF790Q6PG37 636 aa28.33■■■□□ 2.13
FDFT1-220ENST00000531733 C2CD5Q86YS7 1000 aa28.33■■■□□ 2.13
FDFT1-220ENST00000531733 HEG1Q9ULI3 1381 aa28.33■■■□□ 2.13
FDFT1-220ENST00000531733 ANKRD31Q8N7Z5 1873 aa28.32■■■□□ 2.12
FDFT1-220ENST00000531733 STARD3NLO95772 234 aa28.32■■■□□ 2.12
FDFT1-220ENST00000531733 PHACTR3Q96KR7 559 aa28.32■■■□□ 2.12
FDFT1-220ENST00000531733 KDM2BQ8NHM5 1336 aa28.32■■■□□ 2.12
FDFT1-220ENST00000531733 KCNQ3O43525 872 aa28.31■■■□□ 2.12
FDFT1-220ENST00000531733 TEFQ10587 303 aa28.31■■■□□ 2.12
FDFT1-220ENST00000531733 C16orf71Q8IYS4 520 aaPredicted RBP28.31■■■□□ 2.12
FDFT1-220ENST00000531733 CCDC24Q8N4L8 307 aa28.31■■■□□ 2.12
FDFT1-220ENST00000531733 GAS2L2Q8NHY3 880 aa28.31■■■□□ 2.12
FDFT1-220ENST00000531733 SCN7AQ01118 1682 aa28.31■■■□□ 2.12
FDFT1-220ENST00000531733 TNRC6CQ9HCJ0 1690 aaKnown RBP28.31■■■□□ 2.12
FDFT1-220ENST00000531733 TTLL6Q8N841 843 aa28.3■■■□□ 2.12
FDFT1-220ENST00000531733 TBC1D2BQ9UPU7 963 aa28.3■■■□□ 2.12
FDFT1-220ENST00000531733 ZNF330Q9Y3S2 320 aaPredicted RBP28.29■■■□□ 2.12
FDFT1-220ENST00000531733 CEMIPQ8WUJ3 1361 aa28.28■■■□□ 2.12
FDFT1-220ENST00000531733 A1BGP04217 495 aa28.28■■■□□ 2.12
FDFT1-220ENST00000531733 COL11A2P13942 1736 aaPredicted RBP28.27■■■□□ 2.12
FDFT1-220ENST00000531733 A0A087WZG4 1122 aa28.27■■■□□ 2.12
FDFT1-220ENST00000531733 NFKBIEO00221 500 aa28.27■■■□□ 2.12
FDFT1-220ENST00000531733 CCDC88AQ3V6T2 1871 aa28.27■■■□□ 2.12
FDFT1-220ENST00000531733 H0YIN7 160 aa28.26■■■□□ 2.11
FDFT1-220ENST00000531733 LMNB1P20700 586 aa28.26■■■□□ 2.11
FDFT1-220ENST00000531733 PRKAR2BP31323 418 aa28.26■■■□□ 2.11
FDFT1-220ENST00000531733 RSPH6AQ9H0K4 717 aa28.26■■■□□ 2.11
FDFT1-220ENST00000531733 FSTL1Q12841 308 aa28.25■■■□□ 2.11
FDFT1-220ENST00000531733 PRR5LQ6MZQ0 368 aa28.25■■■□□ 2.11
FDFT1-220ENST00000531733 TIAM2Q8IVF5 1701 aa28.25■■■□□ 2.11
FDFT1-220ENST00000531733 FMNL2Q96PY5 1086 aa28.24■■■□□ 2.11
FDFT1-220ENST00000531733 PRAMEF22A3QJZ6 481 aa28.23■■■□□ 2.11
FDFT1-220ENST00000531733 IL6STP40189 918 aaPredicted RBP28.23■■■□□ 2.11
FDFT1-220ENST00000531733 PIP4K2AP48426 406 aaPredicted RBP28.23■■■□□ 2.11
FDFT1-220ENST00000531733 TEX13AQ9BXU3 409 aaPredicted RBP28.23■■■□□ 2.11
FDFT1-220ENST00000531733 ZC3H4Q9UPT8 1303 aaKnown RBP28.22■■■□□ 2.11
FDFT1-220ENST00000531733 CAMTA2O94983 1202 aa28.22■■■□□ 2.11
FDFT1-220ENST00000531733 ZNF219Q9P2Y4 722 aaPredicted RBP28.22■■■□□ 2.11
FDFT1-220ENST00000531733 GLTPD2A6NH11 291 aa28.21■■■□□ 2.11
FDFT1-220ENST00000531733 BTBD11A6QL63 1104 aa28.21■■■□□ 2.11
FDFT1-220ENST00000531733 ZNF622Q969S3 477 aaKnown RBP eCLIP28.21■■■□□ 2.113e-19■□□□□ 8.7
FDFT1-220ENST00000531733 BRIP1Q9BX63 1249 aa28.21■■■□□ 2.11
FDFT1-220ENST00000531733 USP16Q9Y5T5 823 aa28.2■■■□□ 2.1
FDFT1-220ENST00000531733 BCORQ6W2J9 1755 aa28.19■■■□□ 2.1
FDFT1-220ENST00000531733 C21orf2O43822 256 aa28.19■■■□□ 2.1
FDFT1-220ENST00000531733 KLRG1Q96E93 195 aa28.19■■■□□ 2.1
FDFT1-220ENST00000531733 PCNTO95613 3336 aa28.18■■■□□ 2.1
FDFT1-220ENST00000531733 POTECB2RU33 542 aa28.17■■■□□ 2.1
FDFT1-220ENST00000531733 PDE6BP35913 854 aa28.17■■■□□ 2.1
FDFT1-220ENST00000531733 MCM10Q7L590 875 aa28.17■■■□□ 2.1
FDFT1-220ENST00000531733 SMC1BQ8NDV3 1235 aa28.17■■■□□ 2.1
FDFT1-220ENST00000531733 FER1L6Q2WGJ9 1857 aa28.17■■■□□ 2.1
FDFT1-220ENST00000531733 VEGFAP15692 232 aaPredicted RBP28.15■■■□□ 2.1
FDFT1-220ENST00000531733 PPP2R1AP30153 589 aa28.15■■■□□ 2.1
FDFT1-220ENST00000531733 DZIP3Q86Y13 1208 aaKnown RBP28.15■■■□□ 2.1
FDFT1-220ENST00000531733 CFAP53Q96M91 514 aa28.15■■■□□ 2.1
FDFT1-220ENST00000531733 SETDB2Q96T68 719 aa28.15■■■□□ 2.1
FDFT1-220ENST00000531733 SLX4Q8IY92 1834 aa28.15■■■□□ 2.1
FDFT1-220ENST00000531733 DCTN1Q14203 1278 aa28.14■■■□□ 2.1
FDFT1-220ENST00000531733 JMYQ8N9B5 988 aa28.14■■■□□ 2.1
FDFT1-220ENST00000531733 CNBD1Q8NA66 436 aa28.14■■■□□ 2.1
FDFT1-220ENST00000531733 CACNA1SQ13698 1873 aa28.14■■■□□ 2.1
FDFT1-220ENST00000531733 U2AF1L5P0DN76 240 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms