RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 KIF7Q2M1P5 1343 aa19.58■□□□□ 0.73
CTSB-221ENST00000531502 PER1O15534 1290 aaPredicted RBP19.58■□□□□ 0.72
CTSB-221ENST00000531502 ZPR1O75312 459 aa19.58■□□□□ 0.72
CTSB-221ENST00000531502 MTHFSDQ2M296 383 aaKnown RBP19.58■□□□□ 0.72
CTSB-221ENST00000531502 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
CTSB-221ENST00000531502 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
CTSB-221ENST00000531502 ZBTB1Q9Y2K1 713 aa19.57■□□□□ 0.72
CTSB-221ENST00000531502 UBR2Q8IWV8 1755 aa19.57■□□□□ 0.72
CTSB-221ENST00000531502 COL15A1P39059 1388 aa19.57■□□□□ 0.72
CTSB-221ENST00000531502 NFIXQ14938 502 aa19.56■□□□□ 0.72
CTSB-221ENST00000531502 RBM46Q8TBY0 533 aaKnown RBP19.56■□□□□ 0.72
CTSB-221ENST00000531502 VSIG10Q8N0Z9 540 aa19.55■□□□□ 0.72
CTSB-221ENST00000531502 RNF181Q9P0P0 153 aa19.55■□□□□ 0.72
CTSB-221ENST00000531502 WDR90Q96KV7 1748 aa19.54■□□□□ 0.72
CTSB-221ENST00000531502 DLEC1Q9Y238 1755 aa19.53■□□□□ 0.72
CTSB-221ENST00000531502 DIAPH1O60610 1272 aaKnown RBP19.53■□□□□ 0.72
CTSB-221ENST00000531502 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
CTSB-221ENST00000531502 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.72
CTSB-221ENST00000531502 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
CTSB-221ENST00000531502 SERPINB2P05120 415 aa19.51■□□□□ 0.71
CTSB-221ENST00000531502 PRELPP51888 382 aa19.51■□□□□ 0.71
CTSB-221ENST00000531502 TNRC6CQ9HCJ0 1690 aaKnown RBP19.51■□□□□ 0.71
CTSB-221ENST00000531502 EIF5P55010 431 aaKnown RBP19.5■□□□□ 0.71
CTSB-221ENST00000531502 RASSF7Q02833 373 aa19.5■□□□□ 0.71
CTSB-221ENST00000531502 FSTL1Q12841 308 aa19.5■□□□□ 0.71
CTSB-221ENST00000531502 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
CTSB-221ENST00000531502 RRAGCQ9HB90 399 aa19.5■□□□□ 0.71
CTSB-221ENST00000531502 CARMIL3Q8ND23 1372 aa19.49■□□□□ 0.71
CTSB-221ENST00000531502 C16orf71Q8IYS4 520 aaPredicted RBP19.49■□□□□ 0.71
CTSB-221ENST00000531502 SIPA1L3O60292 1781 aaPredicted RBP19.48■□□□□ 0.71
CTSB-221ENST00000531502 CANXP27824 592 aaKnown RBP19.48■□□□□ 0.71
CTSB-221ENST00000531502 HTRA3P83110 453 aa19.48■□□□□ 0.71
CTSB-221ENST00000531502 IL17REQ8NFR9 667 aa19.48■□□□□ 0.71
CTSB-221ENST00000531502 ZC3H4Q9UPT8 1303 aaKnown RBP19.48■□□□□ 0.71
CTSB-221ENST00000531502 ZNF496Q96IT1 587 aaPredicted RBP19.47■□□□□ 0.71
CTSB-221ENST00000531502 NPC1L1Q9UHC9 1359 aa19.46■□□□□ 0.71
CTSB-221ENST00000531502 ANKRD31Q8N7Z5 1873 aa19.46■□□□□ 0.71
CTSB-221ENST00000531502 TTLL6Q8N841 843 aa19.46■□□□□ 0.71
CTSB-221ENST00000531502 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 HEG1Q9ULI3 1381 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 STARD3NLO95772 234 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 LMNB1P20700 586 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 ZNF790Q6PG37 636 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 C2CD5Q86YS7 1000 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 TTC5Q8N0Z6 440 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 KLRG1Q96E93 195 aa19.45■□□□□ 0.7
CTSB-221ENST00000531502 SCN7AQ01118 1682 aa19.44■□□□□ 0.7
CTSB-221ENST00000531502 NFKBIEO00221 500 aa19.44■□□□□ 0.7
CTSB-221ENST00000531502 TBC1D9BQ66K14 1250 aa19.44■□□□□ 0.7
CTSB-221ENST00000531502 JMYQ8N9B5 988 aa19.44■□□□□ 0.7
CTSB-221ENST00000531502 A0A087WZG4 1122 aa19.43■□□□□ 0.7
CTSB-221ENST00000531502 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
CTSB-221ENST00000531502 GNAT3A8MTJ3 354 aa19.43■□□□□ 0.7
CTSB-221ENST00000531502 H0YIN7 160 aa19.43■□□□□ 0.7
CTSB-221ENST00000531502 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
CTSB-221ENST00000531502 TEFQ10587 303 aa19.42■□□□□ 0.7
CTSB-221ENST00000531502 GAS2L2Q8NHY3 880 aa19.42■□□□□ 0.7
CTSB-221ENST00000531502 TEX13AQ9BXU3 409 aaPredicted RBP19.42■□□□□ 0.7
CTSB-221ENST00000531502 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
CTSB-221ENST00000531502 TIAM2Q8IVF5 1701 aa19.42■□□□□ 0.7
CTSB-221ENST00000531502 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
CTSB-221ENST00000531502 SMC1BQ8NDV3 1235 aa19.41■□□□□ 0.7
CTSB-221ENST00000531502 COL11A2P13942 1736 aaPredicted RBP19.41■□□□□ 0.7
CTSB-221ENST00000531502 IL6STP40189 918 aaPredicted RBP19.4■□□□□ 0.7
CTSB-221ENST00000531502 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
CTSB-221ENST00000531502 BRIP1Q9BX63 1249 aa19.4■□□□□ 0.7
CTSB-221ENST00000531502 TBC1D2BQ9UPU7 963 aa19.4■□□□□ 0.7
CTSB-221ENST00000531502 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.7
CTSB-221ENST00000531502 POTECB2RU33 542 aa19.39■□□□□ 0.69
CTSB-221ENST00000531502 A1BGP04217 495 aa19.39■□□□□ 0.69
CTSB-221ENST00000531502 VEGFAP15692 232 aaPredicted RBP19.39■□□□□ 0.69
CTSB-221ENST00000531502 PHACTR3Q96KR7 559 aa19.39■□□□□ 0.69
CTSB-221ENST00000531502 KCNQ3O43525 872 aa19.38■□□□□ 0.69
CTSB-221ENST00000531502 CAMTA2O94983 1202 aa19.38■□□□□ 0.69
CTSB-221ENST00000531502 CCDC24Q8N4L8 307 aa19.38■□□□□ 0.69
CTSB-221ENST00000531502 FMNL2Q96PY5 1086 aa19.38■□□□□ 0.69
CTSB-221ENST00000531502 PDZRN3Q9UPQ7 1066 aa19.38■□□□□ 0.69
CTSB-221ENST00000531502 DICER1Q9UPY3 1922 aaKnown RBP19.37■□□□□ 0.69
CTSB-221ENST00000531502 PDE6BP35913 854 aa19.37■□□□□ 0.69
CTSB-221ENST00000531502 RSPH6AQ9H0K4 717 aa19.37■□□□□ 0.69
CTSB-221ENST00000531502 BCORQ6W2J9 1755 aa19.37■□□□□ 0.69
CTSB-221ENST00000531502 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
CTSB-221ENST00000531502 ZNF622Q969S3 477 aaKnown RBP eCLIP19.36■□□□□ 0.69
CTSB-221ENST00000531502 ZNF330Q9Y3S2 320 aaPredicted RBP19.36■□□□□ 0.69
CTSB-221ENST00000531502 C21orf2O43822 256 aa19.35■□□□□ 0.69
CTSB-221ENST00000531502 SLX4Q8IY92 1834 aa19.35■□□□□ 0.69
CTSB-221ENST00000531502 BTBD11A6QL63 1104 aa19.34■□□□□ 0.69
CTSB-221ENST00000531502 PRKAR2BP31323 418 aa19.34■□□□□ 0.69
CTSB-221ENST00000531502 SETDB2Q96T68 719 aa19.34■□□□□ 0.69
CTSB-221ENST00000531502 USP16Q9Y5T5 823 aa19.34■□□□□ 0.69
CTSB-221ENST00000531502 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
CTSB-221ENST00000531502 COL13A1Q5TAT6 717 aaPredicted RBP19.33■□□□□ 0.68
CTSB-221ENST00000531502 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
CTSB-221ENST00000531502 ARFGEF2Q9Y6D5 1785 aa19.32■□□□□ 0.68
CTSB-221ENST00000531502 PRAMEF22A3QJZ6 481 aa19.32■□□□□ 0.68
CTSB-221ENST00000531502 CNBD1Q8NA66 436 aa19.32■□□□□ 0.68
CTSB-221ENST00000531502 PCNTO95613 3336 aa19.32■□□□□ 0.68
CTSB-221ENST00000531502 SRGNP10124 158 aa19.31■□□□□ 0.68
CTSB-221ENST00000531502 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
CTSB-221ENST00000531502 ERFEQ4G0M1 354 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms