RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 NFIXQ14938 502 aa28.75■■■□□ 2.19
CHKA-206ENST00000531341 PRELPP51888 382 aa28.74■■■□□ 2.19
CHKA-206ENST00000531341 FSTL1Q12841 308 aa28.74■■■□□ 2.19
CHKA-206ENST00000531341 BCL2L12Q9HB09 334 aa28.74■■■□□ 2.19
CHKA-206ENST00000531341 RNMTO43148 476 aaKnown RBP28.73■■■□□ 2.19
CHKA-206ENST00000531341 HMOX1P09601 288 aa28.73■■■□□ 2.19
CHKA-206ENST00000531341 KLRG1Q96E93 195 aa28.73■■■□□ 2.19
CHKA-206ENST00000531341 ZBTB1Q9Y2K1 713 aa28.73■■■□□ 2.19
CHKA-206ENST00000531341 CLSPNQ9HAW4 1339 aa28.72■■■□□ 2.19
CHKA-206ENST00000531341 NARFQ9UHQ1 456 aa28.72■■■□□ 2.19
CHKA-206ENST00000531341 KNSTRNQ9Y448 316 aa28.72■■■□□ 2.19
CHKA-206ENST00000531341 SBF1O95248 1867 aa28.71■■■□□ 2.19
CHKA-206ENST00000531341 AMER1Q5JTC6 1135 aaPredicted RBP28.7■■■□□ 2.18
CHKA-206ENST00000531341 MTHFSDQ2M296 383 aaKnown RBP28.69■■■□□ 2.18
CHKA-206ENST00000531341 COL15A1P39059 1388 aa28.69■■■□□ 2.18
CHKA-206ENST00000531341 MRC1P22897 1456 aa28.68■■■□□ 2.18
CHKA-206ENST00000531341 SERPINB2P05120 415 aa28.68■■■□□ 2.18
CHKA-206ENST00000531341 JMYQ8N9B5 988 aa28.68■■■□□ 2.18
CHKA-206ENST00000531341 AFDNP55196 1824 aaKnown RBP28.67■■■□□ 2.18
CHKA-206ENST00000531341 COL13A1Q5TAT6 717 aaPredicted RBP28.67■■■□□ 2.18
CHKA-206ENST00000531341 CARMIL3Q8ND23 1372 aa28.65■■■□□ 2.18
CHKA-206ENST00000531341 NRXN2Q9P2S2 1712 aa28.65■■■□□ 2.18
CHKA-206ENST00000531341 CANXP27824 592 aaKnown RBP28.64■■■□□ 2.18
CHKA-206ENST00000531341 C2CD5Q86YS7 1000 aa28.63■■■□□ 2.17
CHKA-206ENST00000531341 TNRC6CQ9HCJ0 1690 aaKnown RBP28.63■■■□□ 2.17
CHKA-206ENST00000531341 LMNB1P20700 586 aa28.62■■■□□ 2.17
CHKA-206ENST00000531341 SMC1BQ8NDV3 1235 aa28.62■■■□□ 2.17
CHKA-206ENST00000531341 GLTPD2A6NH11 291 aa28.61■■■□□ 2.17
CHKA-206ENST00000531341 BICDL1Q6ZP65 573 aa28.61■■■□□ 2.17
CHKA-206ENST00000531341 VSIG10Q8N0Z9 540 aa28.61■■■□□ 2.17
CHKA-206ENST00000531341 TTLL6Q8N841 843 aa28.61■■■□□ 2.17
CHKA-206ENST00000531341 NFKBIEO00221 500 aa28.6■■■□□ 2.17
CHKA-206ENST00000531341 EIF5P55010 431 aaKnown RBP28.59■■■□□ 2.17
CHKA-206ENST00000531341 ZC3H4Q9UPT8 1303 aaKnown RBP28.59■■■□□ 2.17
CHKA-206ENST00000531341 VIRMAQ69YN4 1812 aaKnown RBP28.58■■■□□ 2.17
CHKA-206ENST00000531341 POTECB2RU33 542 aa28.57■■■□□ 2.16
CHKA-206ENST00000531341 H0YIN7 160 aa28.57■■■□□ 2.16
CHKA-206ENST00000531341 VEGFAP15692 232 aaPredicted RBP28.57■■■□□ 2.16
CHKA-206ENST00000531341 TBC1D9BQ66K14 1250 aa28.57■■■□□ 2.16
CHKA-206ENST00000531341 CCDC24Q8N4L8 307 aa28.57■■■□□ 2.16
CHKA-206ENST00000531341 DLEC1Q9Y238 1755 aa28.57■■■□□ 2.16
CHKA-206ENST00000531341 DIAPH1O60610 1272 aaKnown RBP28.56■■■□□ 2.16
CHKA-206ENST00000531341 KIF7Q2M1P5 1343 aa28.55■■■□□ 2.16
CHKA-206ENST00000531341 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
CHKA-206ENST00000531341 CC2D1BQ5T0F9 858 aaKnown RBP28.54■■■□□ 2.16
CHKA-206ENST00000531341 ZNF496Q96IT1 587 aaPredicted RBP28.54■■■□□ 2.16
CHKA-206ENST00000531341 ZNF219Q9P2Y4 722 aaPredicted RBP28.54■■■□□ 2.16
CHKA-206ENST00000531341 UBR2Q8IWV8 1755 aa28.54■■■□□ 2.16
CHKA-206ENST00000531341 IL17REQ8NFR9 667 aa28.53■■■□□ 2.16
CHKA-206ENST00000531341 STARD3NLO95772 234 aa28.52■■■□□ 2.16
CHKA-206ENST00000531341 TBC1D2BQ9UPU7 963 aa28.52■■■□□ 2.16
CHKA-206ENST00000531341 C21orf2O43822 256 aa28.51■■■□□ 2.15
CHKA-206ENST00000531341 TTC5Q8N0Z6 440 aa28.51■■■□□ 2.15
CHKA-206ENST00000531341 ZNF622Q969S3 477 aaKnown RBP eCLIP28.51■■■□□ 2.15
CHKA-206ENST00000531341 PRR5LQ6MZQ0 368 aa28.5■■■□□ 2.15
CHKA-206ENST00000531341 TIAM2Q8IVF5 1701 aa28.49■■■□□ 2.15
CHKA-206ENST00000531341 CAPN15O75808 1086 aa28.49■■■□□ 2.15
CHKA-206ENST00000531341 ZNF790Q6PG37 636 aa28.49■■■□□ 2.15
CHKA-206ENST00000531341 BRIP1Q9BX63 1249 aa28.49■■■□□ 2.15
CHKA-206ENST00000531341 ZNF330Q9Y3S2 320 aaPredicted RBP28.49■■■□□ 2.15
CHKA-206ENST00000531341 HEG1Q9ULI3 1381 aa28.49■■■□□ 2.15
CHKA-206ENST00000531341 CCDC88AQ3V6T2 1871 aa28.49■■■□□ 2.15
CHKA-206ENST00000531341 ANKRD31Q8N7Z5 1873 aa28.49■■■□□ 2.15
CHKA-206ENST00000531341 A0A087WZG4 1122 aa28.48■■■□□ 2.15
CHKA-206ENST00000531341 A1BGP04217 495 aa28.46■■■□□ 2.15
CHKA-206ENST00000531341 CNGB1Q14028 1251 aaPredicted RBP28.46■■■□□ 2.15
CHKA-206ENST00000531341 U2SURPO15042 1029 aaKnown RBP28.45■■■□□ 2.14
CHKA-206ENST00000531341 KCNQ3O43525 872 aa28.45■■■□□ 2.14
CHKA-206ENST00000531341 TEFQ10587 303 aa28.45■■■□□ 2.14
CHKA-206ENST00000531341 COL3A1P02461 1466 aaPredicted RBP28.45■■■□□ 2.14
CHKA-206ENST00000531341 GNAT3A8MTJ3 354 aa28.44■■■□□ 2.14
CHKA-206ENST00000531341 HSPA1AP0DMV8 641 aaKnown RBP28.44■■■□□ 2.14
CHKA-206ENST00000531341 HSPA1BP0DMV9 641 aaKnown RBP28.44■■■□□ 2.14
CHKA-206ENST00000531341 PDE6BP35913 854 aa28.44■■■□□ 2.14
CHKA-206ENST00000531341 ERFEQ4G0M1 354 aa28.44■■■□□ 2.14
CHKA-206ENST00000531341 TNS4Q8IZW8 715 aa28.44■■■□□ 2.14
CHKA-206ENST00000531341 COL11A2P13942 1736 aaPredicted RBP28.43■■■□□ 2.14
CHKA-206ENST00000531341 IL6STP40189 918 aaPredicted RBP28.43■■■□□ 2.14
CHKA-206ENST00000531341 DPY19L2Q6NUT2 758 aa28.43■■■□□ 2.14
CHKA-206ENST00000531341 CAMTA2O94983 1202 aa28.42■■■□□ 2.14
CHKA-206ENST00000531341 CCER1Q8TC90 406 aaPredicted RBP28.42■■■□□ 2.14
CHKA-206ENST00000531341 TEX13AQ9BXU3 409 aaPredicted RBP28.42■■■□□ 2.14
CHKA-206ENST00000531341 SCN7AQ01118 1682 aa28.42■■■□□ 2.14
CHKA-206ENST00000531341 POTEIP0CG38 1075 aa28.41■■■□□ 2.14
CHKA-206ENST00000531341 POTEJP0CG39 1038 aa28.41■■■□□ 2.14
CHKA-206ENST00000531341 GAS2L2Q8NHY3 880 aa28.4■■■□□ 2.14
CHKA-206ENST00000531341 PDZRN3Q9UPQ7 1066 aa28.4■■■□□ 2.14
CHKA-206ENST00000531341 DDNO94850 711 aaPredicted RBP28.39■■■□□ 2.14
CHKA-206ENST00000531341 PIP4K2AP48426 406 aaPredicted RBP28.39■■■□□ 2.14
CHKA-206ENST00000531341 FER1L6Q2WGJ9 1857 aa28.39■■■□□ 2.14
CHKA-206ENST00000531341 PHACTR3Q96KR7 559 aa28.39■■■□□ 2.14
CHKA-206ENST00000531341 FMNL2Q96PY5 1086 aa28.39■■■□□ 2.14
CHKA-206ENST00000531341 SETDB2Q96T68 719 aa28.39■■■□□ 2.14
CHKA-206ENST00000531341 SIPA1L3O60292 1781 aaPredicted RBP28.39■■■□□ 2.13
CHKA-206ENST00000531341 CNBD1Q8NA66 436 aa28.38■■■□□ 2.13
CHKA-206ENST00000531341 PRAMEF22A3QJZ6 481 aa28.37■■■□□ 2.13
CHKA-206ENST00000531341 SRGNP10124 158 aa28.37■■■□□ 2.13
CHKA-206ENST00000531341 TAOK3Q9H2K8 898 aa28.37■■■□□ 2.13
CHKA-206ENST00000531341 USP16Q9Y5T5 823 aa28.37■■■□□ 2.13
CHKA-206ENST00000531341 CEMIPQ8WUJ3 1361 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms