RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 PMM1Q92871 262 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 SGIP1Q9BQI5 828 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 FMN1Q68DA7 1419 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 USP17L3A6NCW0 530 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 USP17L4A6NCW7 530 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 EVI5O60447 810 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 DPYDQ12882 1025 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 MLECQ14165 292 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 USP17L2Q6R6M4 530 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 FAM43BQ6ZT52 329 aaPredicted RBP4.32□□□□□ -1.72
CDC27-207ENST00000531206 USP17L1Q7RTZ2 530 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 TMC2Q8TDI7 906 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 PNPLA6Q8IY17 1366 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 MYOM1P52179 1685 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 PRAG1Q86YV5 1406 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 KCNA6P17658 529 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 CLDN10P78369 228 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 CCDC184Q52MB2 194 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 MS4A3Q96HJ5 214 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 SMAD5Q99717 465 aaKnown RBP4.32□□□□□ -1.72
CDC27-207ENST00000531206 GOPCQ9HD26 462 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 PCDHGA10Q9Y5H3 936 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 TMEM94Q12767 1356 aa4.32□□□□□ -1.72
CDC27-207ENST00000531206 MYOM2P54296 1465 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 ARHGAP5Q13017 1502 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 TPD52L2O43399 206 aaKnown RBP4.31□□□□□ -1.72
CDC27-207ENST00000531206 ANKRD13AQ8IZ07 590 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 RDH13Q8NBN7 331 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 SOWAHDA6NJG2 315 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 ATP2B4P23634 1241 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 ZC3H6P61129 1189 aaKnown RBP4.31□□□□□ -1.72
CDC27-207ENST00000531206 KCNA1Q09470 495 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 AAMPQ13685 434 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 AMOTL2Q9Y2J4 779 aa4.31□□□□□ -1.72
CDC27-207ENST00000531206 SFI1A8K8P3 1242 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 C6orf229H3BNL8 230 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 P4HBP07237 508 aaKnown RBP4.3□□□□□ -1.72
CDC27-207ENST00000531206 PRKAR2AP13861 404 aaKnown RBP4.3□□□□□ -1.72
CDC27-207ENST00000531206 TICAM2Q86XR7 235 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 GLYCTKQ8IVS8 523 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 TSEN2Q8NCE0 465 aaKnown RBP4.3□□□□□ -1.72
CDC27-207ENST00000531206 PIK3R5Q8WYR1 880 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 SPOCK3Q9BQ16 436 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 ALG2Q9H553 416 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 CCDC87Q9NVE4 849 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 MAP10Q9P2G4 905 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 TRIM35Q9UPQ4 493 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 ABCC5O15440 1437 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 EFCAB6Q5THR3 1501 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 NALCNQ8IZF0 1738 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 FBXO24O75426 580 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 SLIT2O94813 1529 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 SSFA2P28290 1259 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 MEI1Q5TIA1 1274 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 JMYQ8N9B5 988 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 PIK3R4Q99570 1358 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 TMUB1Q9BVT8 246 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 CARD14Q9BXL6 1004 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 NEUROD4Q9HD90 331 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 DNMT3AQ9Y6K1 912 aaPredicted RBP4.3□□□□□ -1.72
CDC27-207ENST00000531206 FAM26DQ5JW98 314 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 PXYLP1Q8TE99 480 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 CHST12Q9NRB3 414 aa4.3□□□□□ -1.72
CDC27-207ENST00000531206 SEPT9Q9UHD8 586 aaPredicted RBP4.3□□□□□ -1.72
CDC27-207ENST00000531206 ABCA3Q99758 1704 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 PIK3C2BO00750 1634 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 RPRD2Q5VT52 1461 aaKnown RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 TROQ12816 1431 aaPredicted RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 USP17L5A8MUK1 530 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 CLCN6P51797 869 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 RACK1P63244 317 aaKnown RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 PSME1Q06323 249 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 OS9Q13438 667 aaPredicted RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 RSBN1LQ6PCB5 846 aaPredicted RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 LARGE2Q8N3Y3 721 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 QTRT2Q9H974 415 aaKnown RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 PLCH1Q4KWH8 1693 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 MSH6P52701 1360 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 hCG_2014768A0A024R1R8 64 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 KIF4AO95239 1232 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 FILIP1Q7Z7B0 1213 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 GTF3C2Q8WUA4 911 aaPredicted RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 JDP2Q8WYK2 163 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 OSBPL2Q9H1P3 480 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 CICQ96RK0 1608 aaPredicted RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 NRKQ7Z2Y5 1582 aa4.29□□□□□ -1.72
CDC27-207ENST00000531206 ARHGEF28Q8N1W1 1705 aaKnown RBP4.29□□□□□ -1.72
CDC27-207ENST00000531206 MYBP10242 640 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 PROX2Q3B8N5 592 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 DALRD3Q5D0E6 543 aaKnown RBP4.28□□□□□ -1.72
CDC27-207ENST00000531206 PODNQ7Z5L7 613 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 DUSP9Q99956 384 aaKnown RBP4.28□□□□□ -1.72
CDC27-207ENST00000531206 HINFPQ9BQA5 517 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 SAP130Q9H0E3 1048 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 TRPC5Q9UL62 973 aaPredicted RBP4.28□□□□□ -1.72
CDC27-207ENST00000531206 CEP152O94986 1710 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 FOXK1P85037 733 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 FUT2Q10981 343 aa4.28□□□□□ -1.72
CDC27-207ENST00000531206 COL9A2Q14055 689 aaPredicted RBP4.28□□□□□ -1.72
CDC27-207ENST00000531206 FMNL3Q8IVF7 1028 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms