RNA–Protein interactions for RNA: ENST00000530628.2

CDKN2A-210, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN2A, Length 748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-210ENST00000530628 NARFQ9UHQ1 456 aa29.67■■■□□ 2.34
CDKN2A-210ENST00000530628 AFDNP55196 1824 aaKnown RBP29.66■■■□□ 2.34
CDKN2A-210ENST00000530628 COL15A1P39059 1388 aa29.66■■■□□ 2.34
CDKN2A-210ENST00000530628 DALRD3Q5D0E6 543 aaKnown RBP29.66■■■□□ 2.34
CDKN2A-210ENST00000530628 TTC5Q8N0Z6 440 aa29.66■■■□□ 2.34
CDKN2A-210ENST00000530628 ZBTB1Q9Y2K1 713 aa29.66■■■□□ 2.34
CDKN2A-210ENST00000530628 COL3A1P02461 1466 aaPredicted RBP29.66■■■□□ 2.34
CDKN2A-210ENST00000530628 CHRNA5P30532 468 aa29.64■■■□□ 2.34
CDKN2A-210ENST00000530628 GAS2L2Q8NHY3 880 aa29.64■■■□□ 2.34
CDKN2A-210ENST00000530628 GNAT3A8MTJ3 354 aa29.62■■■□□ 2.33
CDKN2A-210ENST00000530628 TEFQ10587 303 aa29.62■■■□□ 2.33
CDKN2A-210ENST00000530628 CANXP27824 592 aaKnown RBP29.61■■■□□ 2.33
CDKN2A-210ENST00000530628 NFIXQ14938 502 aa29.61■■■□□ 2.33
CDKN2A-210ENST00000530628 C9orf131Q5VYM1 1079 aa29.61■■■□□ 2.33
CDKN2A-210ENST00000530628 STARD3NLO95772 234 aa29.6■■■□□ 2.33
CDKN2A-210ENST00000530628 NRXN2Q9P2S2 1712 aa29.59■■■□□ 2.33
CDKN2A-210ENST00000530628 IL17REQ8NFR9 667 aa29.59■■■□□ 2.33
CDKN2A-210ENST00000530628 SIPA1L3O60292 1781 aaPredicted RBP29.59■■■□□ 2.33
CDKN2A-210ENST00000530628 SBF1O95248 1867 aa29.59■■■□□ 2.33
CDKN2A-210ENST00000530628 TOMM70O94826 608 aa29.57■■■□□ 2.32
CDKN2A-210ENST00000530628 SERPINB2P05120 415 aa29.57■■■□□ 2.32
CDKN2A-210ENST00000530628 ZNF790Q6PG37 636 aa29.57■■■□□ 2.32
CDKN2A-210ENST00000530628 CFAP53Q96M91 514 aa29.57■■■□□ 2.32
CDKN2A-210ENST00000530628 BCL2L12Q9HB09 334 aa29.57■■■□□ 2.32
CDKN2A-210ENST00000530628 A0A087WZG4 1122 aa29.56■■■□□ 2.32
CDKN2A-210ENST00000530628 TEX13AQ9BXU3 409 aaPredicted RBP29.56■■■□□ 2.32
CDKN2A-210ENST00000530628 ZNF496Q96IT1 587 aaPredicted RBP29.55■■■□□ 2.32
CDKN2A-210ENST00000530628 NMRK2Q9NPI5 230 aa29.55■■■□□ 2.32
CDKN2A-210ENST00000530628 CEP350Q5VT06 3117 aa29.54■■■□□ 2.32
CDKN2A-210ENST00000530628 HEG1Q9ULI3 1381 aa29.54■■■□□ 2.32
CDKN2A-210ENST00000530628 EIF5P55010 431 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-210ENST00000530628 RNF181Q9P0P0 153 aa29.54■■■□□ 2.32
CDKN2A-210ENST00000530628 DLEC1Q9Y238 1755 aa29.54■■■□□ 2.32
CDKN2A-210ENST00000530628 BICDL1Q6ZP65 573 aa29.52■■■□□ 2.32
CDKN2A-210ENST00000530628 PRKAR2BP31323 418 aa29.51■■■□□ 2.31
CDKN2A-210ENST00000530628 FMNL2Q96PY5 1086 aa29.51■■■□□ 2.31
CDKN2A-210ENST00000530628 NUDCQ9Y266 331 aa29.51■■■□□ 2.31
CDKN2A-210ENST00000530628 ZNF330Q9Y3S2 320 aaPredicted RBP29.5■■■□□ 2.31
CDKN2A-210ENST00000530628 KDM2BQ8NHM5 1336 aa29.49■■■□□ 2.31
CDKN2A-210ENST00000530628 C16orf71Q8IYS4 520 aaPredicted RBP29.49■■■□□ 2.31
CDKN2A-210ENST00000530628 PHACTR3Q96KR7 559 aa29.49■■■□□ 2.31
CDKN2A-210ENST00000530628 RSPH6AQ9H0K4 717 aa29.49■■■□□ 2.31
CDKN2A-210ENST00000530628 APLP1P51693 650 aa29.48■■■□□ 2.31
CDKN2A-210ENST00000530628 NPM2Q86SE8 214 aaKnown RBP29.48■■■□□ 2.31
CDKN2A-210ENST00000530628 C2CD5Q86YS7 1000 aa29.48■■■□□ 2.31
CDKN2A-210ENST00000530628 CEMIPQ8WUJ3 1361 aa29.48■■■□□ 2.31
CDKN2A-210ENST00000530628 BTBD11A6QL63 1104 aa29.47■■■□□ 2.31
CDKN2A-210ENST00000530628 H0YIN7 160 aa29.47■■■□□ 2.31
CDKN2A-210ENST00000530628 IL6STP40189 918 aaPredicted RBP29.47■■■□□ 2.31
CDKN2A-210ENST00000530628 TTLL6Q8N841 843 aa29.47■■■□□ 2.31
CDKN2A-210ENST00000530628 SCN7AQ01118 1682 aa29.47■■■□□ 2.31
CDKN2A-210ENST00000530628 CCDC88AQ3V6T2 1871 aa29.46■■■□□ 2.31
CDKN2A-210ENST00000530628 TBC1D9BQ66K14 1250 aa29.46■■■□□ 2.31
CDKN2A-210ENST00000530628 TBC1D2BQ9UPU7 963 aa29.46■■■□□ 2.31
CDKN2A-210ENST00000530628 RBM46Q8TBY0 533 aaKnown RBP29.45■■■□□ 2.31
CDKN2A-210ENST00000530628 TNRC6CQ9HCJ0 1690 aaKnown RBP29.44■■■□□ 2.3
CDKN2A-210ENST00000530628 CARMIL3Q8ND23 1372 aa29.44■■■□□ 2.3
CDKN2A-210ENST00000530628 RASSF7Q02833 373 aa29.44■■■□□ 2.3
CDKN2A-210ENST00000530628 ANKRD31Q8N7Z5 1873 aa29.43■■■□□ 2.3
CDKN2A-210ENST00000530628 A1BGP04217 495 aa29.43■■■□□ 2.3
CDKN2A-210ENST00000530628 U2AF1L5P0DN76 240 aaPredicted RBP29.43■■■□□ 2.3
CDKN2A-210ENST00000530628 PPP2R1AP30153 589 aa29.43■■■□□ 2.3
CDKN2A-210ENST00000530628 U2AF1Q01081 240 aaKnown RBP eCLIP29.43■■■□□ 2.3
CDKN2A-210ENST00000530628 KCNQ3O43525 872 aa29.42■■■□□ 2.3
CDKN2A-210ENST00000530628 RTF1Q92541 710 aaKnown RBP29.42■■■□□ 2.3
CDKN2A-210ENST00000530628 RRAGCQ9HB90 399 aa29.42■■■□□ 2.3
CDKN2A-210ENST00000530628 PDZRN3Q9UPQ7 1066 aa29.41■■■□□ 2.3
CDKN2A-210ENST00000530628 ZC3H4Q9UPT8 1303 aaKnown RBP29.41■■■□□ 2.3
CDKN2A-210ENST00000530628 LMNB1P20700 586 aa29.4■■■□□ 2.3
CDKN2A-210ENST00000530628 PDE6BP35913 854 aa29.4■■■□□ 2.3
CDKN2A-210ENST00000530628 BRIP1Q9BX63 1249 aa29.39■■■□□ 2.3
CDKN2A-210ENST00000530628 PRR5LQ6MZQ0 368 aa29.38■■■□□ 2.29
CDKN2A-210ENST00000530628 ZNF622Q969S3 477 aaKnown RBP eCLIP29.38■■■□□ 2.29
CDKN2A-210ENST00000530628 SETDB2Q96T68 719 aa29.38■■■□□ 2.29
CDKN2A-210ENST00000530628 USP16Q9Y5T5 823 aa29.38■■■□□ 2.29
CDKN2A-210ENST00000530628 WDR90Q96KV7 1748 aa29.37■■■□□ 2.29
CDKN2A-210ENST00000530628 BCORQ6W2J9 1755 aa29.37■■■□□ 2.29
CDKN2A-210ENST00000530628 NPHP1O15259 732 aa29.37■■■□□ 2.29
CDKN2A-210ENST00000530628 MCM10Q7L590 875 aa29.37■■■□□ 2.29
CDKN2A-210ENST00000530628 CAMTA2O94983 1202 aa29.36■■■□□ 2.29
CDKN2A-210ENST00000530628 FSTL1Q12841 308 aa29.36■■■□□ 2.29
CDKN2A-210ENST00000530628 IFFO2Q5TF58 517 aa29.36■■■□□ 2.29
CDKN2A-210ENST00000530628 DZIP3Q86Y13 1208 aaKnown RBP29.36■■■□□ 2.29
CDKN2A-210ENST00000530628 CCDC24Q8N4L8 307 aa29.36■■■□□ 2.29
CDKN2A-210ENST00000530628 TIAM2Q8IVF5 1701 aa29.35■■■□□ 2.29
CDKN2A-210ENST00000530628 PRELPP51888 382 aa29.34■■■□□ 2.29
CDKN2A-210ENST00000530628 COL11A2P13942 1736 aaPredicted RBP29.34■■■□□ 2.29
CDKN2A-210ENST00000530628 HTATSF1O43719 755 aaKnown RBP29.33■■■□□ 2.29
CDKN2A-210ENST00000530628 SNRPA1P09661 255 aaKnown RBP29.33■■■□□ 2.29
CDKN2A-210ENST00000530628 CNBD1Q8NA66 436 aa29.33■■■□□ 2.29
CDKN2A-210ENST00000530628 CACNA1SQ13698 1873 aa29.33■■■□□ 2.29
CDKN2A-210ENST00000530628 PRAMEF22A3QJZ6 481 aa29.32■■■□□ 2.28
CDKN2A-210ENST00000530628 GLTPD2A6NH11 291 aa29.32■■■□□ 2.28
CDKN2A-210ENST00000530628 PIP4K2AP48426 406 aaPredicted RBP29.32■■■□□ 2.28
CDKN2A-210ENST00000530628 ST5P78524 1137 aa29.32■■■□□ 2.28
CDKN2A-210ENST00000530628 DNAJC5GQ8N7S2 189 aa29.32■■■□□ 2.28
CDKN2A-210ENST00000530628 NFKBIEO00221 500 aa29.31■■■□□ 2.28
CDKN2A-210ENST00000530628 C21orf2O43822 256 aa29.31■■■□□ 2.28
CDKN2A-210ENST00000530628 DCTN1Q14203 1278 aa29.31■■■□□ 2.28
CDKN2A-210ENST00000530628 ZNF219Q9P2Y4 722 aaPredicted RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms