RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 VSIG10Q8N0Z9 540 aa20.25■□□□□ 0.83
CAPN1-219ENST00000530495 NARFQ9UHQ1 456 aa20.25■□□□□ 0.83
CAPN1-219ENST00000530495 KCPQ6ZWJ8 1503 aa20.24■□□□□ 0.83
CAPN1-219ENST00000530495 DIAPH1O60610 1272 aaKnown RBP20.24■□□□□ 0.83
CAPN1-219ENST00000530495 SBF1O95248 1867 aa20.24■□□□□ 0.83
CAPN1-219ENST00000530495 DNAJC5GQ8N7S2 189 aa20.23■□□□□ 0.83
CAPN1-219ENST00000530495 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
CAPN1-219ENST00000530495 NFIXQ14938 502 aa20.22■□□□□ 0.83
CAPN1-219ENST00000530495 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
CAPN1-219ENST00000530495 NRXN2Q9P2S2 1712 aa20.22■□□□□ 0.83
CAPN1-219ENST00000530495 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
CAPN1-219ENST00000530495 RNF181Q9P0P0 153 aa20.21■□□□□ 0.83
CAPN1-219ENST00000530495 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
CAPN1-219ENST00000530495 KDM2BQ8NHM5 1336 aa20.21■□□□□ 0.83
CAPN1-219ENST00000530495 COL15A1P39059 1388 aa20.21■□□□□ 0.83
CAPN1-219ENST00000530495 UBR2Q8IWV8 1755 aa20.2■□□□□ 0.82
CAPN1-219ENST00000530495 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
CAPN1-219ENST00000530495 C16orf71Q8IYS4 520 aaPredicted RBP20.19■□□□□ 0.82
CAPN1-219ENST00000530495 SERPINB2P05120 415 aa20.18■□□□□ 0.82
CAPN1-219ENST00000530495 STARD3NLO95772 234 aa20.17■□□□□ 0.82
CAPN1-219ENST00000530495 FSTL1Q12841 308 aa20.17■□□□□ 0.82
CAPN1-219ENST00000530495 RRAGCQ9HB90 399 aa20.17■□□□□ 0.82
CAPN1-219ENST00000530495 DLEC1Q9Y238 1755 aa20.16■□□□□ 0.82
CAPN1-219ENST00000530495 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
CAPN1-219ENST00000530495 EIF5P55010 431 aaKnown RBP20.16■□□□□ 0.82
CAPN1-219ENST00000530495 TTC5Q8N0Z6 440 aa20.16■□□□□ 0.82
CAPN1-219ENST00000530495 IL17REQ8NFR9 667 aa20.15■□□□□ 0.82
CAPN1-219ENST00000530495 NPC1L1Q9UHC9 1359 aa20.15■□□□□ 0.82
CAPN1-219ENST00000530495 WDR90Q96KV7 1748 aa20.15■□□□□ 0.82
CAPN1-219ENST00000530495 TNRC6CQ9HCJ0 1690 aaKnown RBP20.14■□□□□ 0.81
CAPN1-219ENST00000530495 ZC3H4Q9UPT8 1303 aaKnown RBP20.14■□□□□ 0.81
CAPN1-219ENST00000530495 A0A087WZG4 1122 aa20.14■□□□□ 0.81
CAPN1-219ENST00000530495 GNAT3A8MTJ3 354 aa20.14■□□□□ 0.81
CAPN1-219ENST00000530495 TTLL6Q8N841 843 aa20.14■□□□□ 0.81
CAPN1-219ENST00000530495 TEX13AQ9BXU3 409 aaPredicted RBP20.14■□□□□ 0.81
CAPN1-219ENST00000530495 COL3A1P02461 1466 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-219ENST00000530495 H0YIN7 160 aa20.13■□□□□ 0.81
CAPN1-219ENST00000530495 LMNB1P20700 586 aa20.13■□□□□ 0.81
CAPN1-219ENST00000530495 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
CAPN1-219ENST00000530495 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
CAPN1-219ENST00000530495 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-219ENST00000530495 RASSF7Q02833 373 aa20.12■□□□□ 0.81
CAPN1-219ENST00000530495 TEFQ10587 303 aa20.12■□□□□ 0.81
CAPN1-219ENST00000530495 GAS2L2Q8NHY3 880 aa20.12■□□□□ 0.81
CAPN1-219ENST00000530495 SIPA1L3O60292 1781 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-219ENST00000530495 HEG1Q9ULI3 1381 aa20.11■□□□□ 0.81
CAPN1-219ENST00000530495 U2SURPO15042 1029 aaKnown RBP20.11■□□□□ 0.81
CAPN1-219ENST00000530495 PRELPP51888 382 aa20.11■□□□□ 0.81
CAPN1-219ENST00000530495 BICDL1Q6ZP65 573 aa20.11■□□□□ 0.81
CAPN1-219ENST00000530495 CCDC88AQ3V6T2 1871 aa20.11■□□□□ 0.81
CAPN1-219ENST00000530495 GLTPD2A6NH11 291 aa20.1■□□□□ 0.81
CAPN1-219ENST00000530495 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
CAPN1-219ENST00000530495 CARMIL3Q8ND23 1372 aa20.09■□□□□ 0.81
CAPN1-219ENST00000530495 BRIP1Q9BX63 1249 aa20.09■□□□□ 0.81
CAPN1-219ENST00000530495 PDZRN3Q9UPQ7 1066 aa20.09■□□□□ 0.81
CAPN1-219ENST00000530495 ANKRD31Q8N7Z5 1873 aa20.08■□□□□ 0.81
CAPN1-219ENST00000530495 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.81
CAPN1-219ENST00000530495 HTRA3P83110 453 aa20.08■□□□□ 0.81
CAPN1-219ENST00000530495 SMC1BQ8NDV3 1235 aa20.08■□□□□ 0.81
CAPN1-219ENST00000530495 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
CAPN1-219ENST00000530495 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.81
CAPN1-219ENST00000530495 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.8
CAPN1-219ENST00000530495 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-219ENST00000530495 PDE6BP35913 854 aa20.07■□□□□ 0.8
CAPN1-219ENST00000530495 JMYQ8N9B5 988 aa20.07■□□□□ 0.8
CAPN1-219ENST00000530495 FMNL2Q96PY5 1086 aa20.07■□□□□ 0.8
CAPN1-219ENST00000530495 NFKBIEO00221 500 aa20.06■□□□□ 0.8
CAPN1-219ENST00000530495 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-219ENST00000530495 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
CAPN1-219ENST00000530495 SCN7AQ01118 1682 aa20.06■□□□□ 0.8
CAPN1-219ENST00000530495 A1BGP04217 495 aa20.05■□□□□ 0.8
CAPN1-219ENST00000530495 PRR5LQ6MZQ0 368 aa20.05■□□□□ 0.8
CAPN1-219ENST00000530495 ZNF622Q969S3 477 aaKnown RBP eCLIP20.04■□□□□ 0.83e-6■■■■□ 24.2
CAPN1-219ENST00000530495 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-219ENST00000530495 TIAM2Q8IVF5 1701 aa20.04■□□□□ 0.8
CAPN1-219ENST00000530495 BTBD11A6QL63 1104 aa20.03■□□□□ 0.8
CAPN1-219ENST00000530495 KCNQ3O43525 872 aa20.03■□□□□ 0.8
CAPN1-219ENST00000530495 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
CAPN1-219ENST00000530495 NPM2Q86SE8 214 aaKnown RBP20.03■□□□□ 0.8
CAPN1-219ENST00000530495 SETDB2Q96T68 719 aa20.03■□□□□ 0.8
CAPN1-219ENST00000530495 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
CAPN1-219ENST00000530495 FER1L6Q2WGJ9 1857 aa20.03■□□□□ 0.8
CAPN1-219ENST00000530495 DICER1Q9UPY3 1922 aaKnown RBP20.02■□□□□ 0.8
CAPN1-219ENST00000530495 C21orf2O43822 256 aa20.02■□□□□ 0.8
CAPN1-219ENST00000530495 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
CAPN1-219ENST00000530495 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
CAPN1-219ENST00000530495 CFAP53Q96M91 514 aa20.02■□□□□ 0.8
CAPN1-219ENST00000530495 POTECB2RU33 542 aa20.01■□□□□ 0.79
CAPN1-219ENST00000530495 DPY19L2Q6NUT2 758 aa20.01■□□□□ 0.79
CAPN1-219ENST00000530495 USP16Q9Y5T5 823 aa20.01■□□□□ 0.79
CAPN1-219ENST00000530495 COL11A2P13942 1736 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-219ENST00000530495 CNBD1Q8NA66 436 aa20■□□□□ 0.79
CAPN1-219ENST00000530495 SRGNP10124 158 aa19.99■□□□□ 0.79
CAPN1-219ENST00000530495 ERFEQ4G0M1 354 aa19.99■□□□□ 0.79
CAPN1-219ENST00000530495 STYK1Q6J9G0 422 aa19.99■□□□□ 0.79
CAPN1-219ENST00000530495 DZIP3Q86Y13 1208 aaKnown RBP19.99■□□□□ 0.79
CAPN1-219ENST00000530495 CNKSR1Q969H4 720 aa19.99■□□□□ 0.79
CAPN1-219ENST00000530495 ZNF219Q9P2Y4 722 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-219ENST00000530495 NUDCQ9Y266 331 aa19.99■□□□□ 0.79
CAPN1-219ENST00000530495 LTBP3Q9NS15 1303 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms