RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 HSPA6P17066 643 aa25.17■■□□□ 1.62
PTP4A2-212ENST00000529477 DCTN1Q14203 1278 aa25.17■■□□□ 1.62
PTP4A2-212ENST00000529477 FMNL2Q96PY5 1086 aa25.17■■□□□ 1.62
PTP4A2-212ENST00000529477 TEX13AQ9BXU3 409 aaPredicted RBP25.17■■□□□ 1.62
PTP4A2-212ENST00000529477 CCDC87Q9NVE4 849 aa25.17■■□□□ 1.62
PTP4A2-212ENST00000529477 STARD3NLO95772 234 aa25.16■■□□□ 1.62
PTP4A2-212ENST00000529477 ZNF496Q96IT1 587 aaPredicted RBP25.15■■□□□ 1.62
PTP4A2-212ENST00000529477 HEG1Q9ULI3 1381 aa25.15■■□□□ 1.62
PTP4A2-212ENST00000529477 ANP32CO43423 234 aa25.14■■□□□ 1.62
PTP4A2-212ENST00000529477 CYP19A1P11511 503 aaPredicted RBP25.14■■□□□ 1.62
PTP4A2-212ENST00000529477 TAF7Q15545 349 aaPredicted RBP25.14■■□□□ 1.62
PTP4A2-212ENST00000529477 ARHGEF1Q92888 912 aaKnown RBP25.14■■□□□ 1.62
PTP4A2-212ENST00000529477 KIF13BQ9NQT8 1826 aa25.14■■□□□ 1.61
PTP4A2-212ENST00000529477 LMOD3Q0VAK6 560 aa25.13■■□□□ 1.61
PTP4A2-212ENST00000529477 INTS5Q6P9B9 1019 aaKnown RBP25.12■■□□□ 1.61
PTP4A2-212ENST00000529477 NLGN1Q8N2Q7 840 aa25.12■■□□□ 1.61
PTP4A2-212ENST00000529477 PNISRQ8TF01 805 aaKnown RBP25.12■■□□□ 1.61
PTP4A2-212ENST00000529477 KIAA1551Q9HCM1 1747 aa25.12■■□□□ 1.61
PTP4A2-212ENST00000529477 RIPK4P57078 832 aa25.11■■□□□ 1.61
PTP4A2-212ENST00000529477 RUNDC1Q96C34 613 aa25.11■■□□□ 1.61
PTP4A2-212ENST00000529477 C4AP0C0L4 1744 aa25.1■■□□□ 1.61
PTP4A2-212ENST00000529477 CCDC146Q8IYE0 955 aa25.1■■□□□ 1.61
PTP4A2-212ENST00000529477 ADAMTS8Q9UP79 889 aa25.1■■□□□ 1.61
PTP4A2-212ENST00000529477 TMPOP42166 694 aaKnown RBP25.09■■□□□ 1.61
PTP4A2-212ENST00000529477 ZNF526Q8TF50 670 aaPredicted RBP25.09■■□□□ 1.61
PTP4A2-212ENST00000529477 ZPR1O75312 459 aa25.08■■□□□ 1.61
PTP4A2-212ENST00000529477 NPM2Q86SE8 214 aaKnown RBP25.08■■□□□ 1.61
PTP4A2-212ENST00000529477 ZBTB1Q9Y2K1 713 aa25.08■■□□□ 1.61
PTP4A2-212ENST00000529477 SOS1Q07889 1333 aaPredicted RBP25.08■■□□□ 1.6
PTP4A2-212ENST00000529477 KCNQ3O43525 872 aa25.07■■□□□ 1.6
PTP4A2-212ENST00000529477 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
PTP4A2-212ENST00000529477 KIF3CO14782 793 aa25.06■■□□□ 1.6
PTP4A2-212ENST00000529477 SNRPA1P09661 255 aaKnown RBP25.06■■□□□ 1.6
PTP4A2-212ENST00000529477 USP42Q9H9J4 1324 aaKnown RBP25.06■■□□□ 1.6
PTP4A2-212ENST00000529477 COL15A1P39059 1388 aa25.05■■□□□ 1.6
PTP4A2-212ENST00000529477 MMP10P09238 476 aa25.05■■□□□ 1.6
PTP4A2-212ENST00000529477 GYS1P13807 737 aa25.05■■□□□ 1.6
PTP4A2-212ENST00000529477 NEUROD2Q15784 382 aa25.05■■□□□ 1.6
PTP4A2-212ENST00000529477 THUMPD2Q9BTF0 503 aaKnown RBP25.05■■□□□ 1.6
PTP4A2-212ENST00000529477 MIS18AQ9NYP9 233 aa25.04■■□□□ 1.6
PTP4A2-212ENST00000529477 A0A087WZG4 1122 aa25.03■■□□□ 1.6
PTP4A2-212ENST00000529477 RRP7AQ9Y3A4 280 aaKnown RBP25.03■■□□□ 1.6
PTP4A2-212ENST00000529477 SRP68Q9UHB9 627 aaKnown RBP25.02■■□□□ 1.6
PTP4A2-212ENST00000529477 ZNF330Q9Y3S2 320 aaPredicted RBP25.02■■□□□ 1.6
PTP4A2-212ENST00000529477 PARP3Q9Y6F1 533 aa25.02■■□□□ 1.6
PTP4A2-212ENST00000529477 KDM3BQ7LBC6 1761 aa25.02■■□□□ 1.6
PTP4A2-212ENST00000529477 N4BP2Q86UW6 1770 aaPredicted RBP25.02■■□□□ 1.6
PTP4A2-212ENST00000529477 BRCA1P38398 1863 aaKnown RBP25.02■■□□□ 1.6
PTP4A2-212ENST00000529477 PXDNLA1KZ92 1463 aa25.02■■□□□ 1.6
PTP4A2-212ENST00000529477 WWC3Q9ULE0 1092 aa25.01■■□□□ 1.59
PTP4A2-212ENST00000529477 IL6STP40189 918 aaPredicted RBP25■■□□□ 1.59
PTP4A2-212ENST00000529477 NARFQ9UHQ1 456 aa25■■□□□ 1.59
PTP4A2-212ENST00000529477 EIF5P55010 431 aaKnown RBP24.99■■□□□ 1.59
PTP4A2-212ENST00000529477 USPL1Q5W0Q7 1092 aa24.99■■□□□ 1.59
PTP4A2-212ENST00000529477 MRS2Q9HD23 443 aa24.99■■□□□ 1.59
PTP4A2-212ENST00000529477 TSPYL4Q9UJ04 414 aa24.99■■□□□ 1.59
PTP4A2-212ENST00000529477 USP16Q9Y5T5 823 aa24.99■■□□□ 1.59
PTP4A2-212ENST00000529477 A1BGP04217 495 aa24.98■■□□□ 1.59
PTP4A2-212ENST00000529477 BABAM1Q9NWV8 329 aa24.98■■□□□ 1.59
PTP4A2-212ENST00000529477 FKBP8Q14318 412 aa24.97■■□□□ 1.59
PTP4A2-212ENST00000529477 EIF4A1P60842 406 aaKnown RBP24.96■■□□□ 1.59
PTP4A2-212ENST00000529477 C10orf71Q711Q0 1435 aa24.95■■□□□ 1.59
PTP4A2-212ENST00000529477 LAMB4A4D0S4 1761 aa24.95■■□□□ 1.59
PTP4A2-212ENST00000529477 PRAMEF22A3QJZ6 481 aa24.95■■□□□ 1.58
PTP4A2-212ENST00000529477 APLP1P51693 650 aa24.95■■□□□ 1.58
PTP4A2-212ENST00000529477 ARFGEF1Q9Y6D6 1849 aa24.94■■□□□ 1.58
PTP4A2-212ENST00000529477 APAF1O14727 1248 aa24.94■■□□□ 1.58
PTP4A2-212ENST00000529477 CCDC184Q52MB2 194 aa24.94■■□□□ 1.58
PTP4A2-212ENST00000529477 WDR90Q96KV7 1748 aa24.93■■□□□ 1.58
PTP4A2-212ENST00000529477 TRIM35Q9UPQ4 493 aa24.93■■□□□ 1.58
PTP4A2-212ENST00000529477 TBC1D2BQ9UPU7 963 aa24.92■■□□□ 1.58
PTP4A2-212ENST00000529477 LAS1LQ9Y4W2 734 aaKnown RBP24.92■■□□□ 1.58
PTP4A2-212ENST00000529477 TOMM70O94826 608 aa24.91■■□□□ 1.58
PTP4A2-212ENST00000529477 TGFB2P61812 414 aa24.91■■□□□ 1.58
PTP4A2-212ENST00000529477 CALD1Q05682 793 aaKnown RBP24.91■■□□□ 1.58
PTP4A2-212ENST00000529477 PIP4K2AP48426 406 aaPredicted RBP24.9■■□□□ 1.58
PTP4A2-212ENST00000529477 DZIP3Q86Y13 1208 aaKnown RBP24.9■■□□□ 1.58
PTP4A2-212ENST00000529477 DNAJC5GQ8N7S2 189 aa24.9■■□□□ 1.58
PTP4A2-212ENST00000529477 SCN7AQ01118 1682 aa24.89■■□□□ 1.58
PTP4A2-212ENST00000529477 TM4SF1P30408 202 aa24.89■■□□□ 1.58
PTP4A2-212ENST00000529477 POLRMTO00411 1230 aaKnown RBP24.88■■□□□ 1.57
PTP4A2-212ENST00000529477 DDR1Q08345 913 aa24.88■■□□□ 1.57
PTP4A2-212ENST00000529477 NFIXQ14938 502 aa24.88■■□□□ 1.57
PTP4A2-212ENST00000529477 CHL1O00533 1208 aa24.87■■□□□ 1.57
PTP4A2-212ENST00000529477 BCL2L12Q9HB09 334 aa24.87■■□□□ 1.57
PTP4A2-212ENST00000529477 ZNF652Q9Y2D9 606 aa24.87■■□□□ 1.57
PTP4A2-212ENST00000529477 BICDL1Q6ZP65 573 aa24.86■■□□□ 1.57
PTP4A2-212ENST00000529477 BCS1LQ9Y276 419 aa24.86■■□□□ 1.57
PTP4A2-212ENST00000529477 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
PTP4A2-212ENST00000529477 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
PTP4A2-212ENST00000529477 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
PTP4A2-212ENST00000529477 CFAP44Q96MT7 982 aa24.85■■□□□ 1.57
PTP4A2-212ENST00000529477 A0A0G2JLW4 131 aa24.84■■□□□ 1.57
PTP4A2-212ENST00000529477 CAMTA2O94983 1202 aa24.84■■□□□ 1.57
PTP4A2-212ENST00000529477 BCORQ6W2J9 1755 aa24.84■■□□□ 1.57
PTP4A2-212ENST00000529477 ERBB4Q15303 1308 aa24.84■■□□□ 1.57
PTP4A2-212ENST00000529477 SERPINB2P05120 415 aa24.83■■□□□ 1.57
PTP4A2-212ENST00000529477 CLEC4GQ6UXB4 293 aa24.83■■□□□ 1.57
PTP4A2-212ENST00000529477 SETDB2Q96T68 719 aa24.83■■□□□ 1.57
PTP4A2-212ENST00000529477 NMRK2Q9NPI5 230 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms