RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 SMARCA5O60264 1052 aaPredicted RBP19.47■□□□□ 0.71
TM9SF1-208ENST00000529332 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
TM9SF1-208ENST00000529332 MPRIPQ6WCQ1 1025 aa19.47■□□□□ 0.71
TM9SF1-208ENST00000529332 IFNL2Q8IZJ0 200 aa19.47■□□□□ 0.71
TM9SF1-208ENST00000529332 NRAPQ86VF7 1730 aa19.46■□□□□ 0.71
TM9SF1-208ENST00000529332 IL2RBP14784 551 aa19.46■□□□□ 0.71
TM9SF1-208ENST00000529332 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
TM9SF1-208ENST00000529332 PHKG2P15735 406 aa19.46■□□□□ 0.71
TM9SF1-208ENST00000529332 PANK2Q9BZ23 570 aa19.46■□□□□ 0.71
TM9SF1-208ENST00000529332 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
TM9SF1-208ENST00000529332 ADAMTS2O95450 1211 aa19.45■□□□□ 0.7
TM9SF1-208ENST00000529332 HSP90AA1P07900 732 aaKnown RBP19.45■□□□□ 0.7
TM9SF1-208ENST00000529332 G2E3Q7L622 706 aa19.45■□□□□ 0.7
TM9SF1-208ENST00000529332 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
TM9SF1-208ENST00000529332 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
TM9SF1-208ENST00000529332 NUTM2BA6NNL0 878 aaPredicted RBP19.44■□□□□ 0.7
TM9SF1-208ENST00000529332 NUTM2EB1AL46 878 aaPredicted RBP19.44■□□□□ 0.7
TM9SF1-208ENST00000529332 APBB1O00213 710 aa19.44■□□□□ 0.7
TM9SF1-208ENST00000529332 NUTM2AQ8IVF1 878 aaPredicted RBP19.44■□□□□ 0.7
TM9SF1-208ENST00000529332 USP26Q9BXU7 913 aa19.44■□□□□ 0.7
TM9SF1-208ENST00000529332 WNK3Q9BYP7 1800 aa19.44■□□□□ 0.7
TM9SF1-208ENST00000529332 SDSP20132 328 aa19.43■□□□□ 0.7
TM9SF1-208ENST00000529332 ZCRB1Q8TBF4 217 aaKnown RBP19.43■□□□□ 0.7
TM9SF1-208ENST00000529332 GBP4Q96PP9 640 aa19.43■□□□□ 0.7
TM9SF1-208ENST00000529332 F6X3S4 739 aa19.42■□□□□ 0.7
TM9SF1-208ENST00000529332 DCAF5Q96JK2 942 aa19.42■□□□□ 0.7
TM9SF1-208ENST00000529332 SHANK3Q9BYB0 1731 aa19.42■□□□□ 0.7
TM9SF1-208ENST00000529332 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
TM9SF1-208ENST00000529332 RRAGDQ9NQL2 400 aaPredicted RBP19.42■□□□□ 0.7
TM9SF1-208ENST00000529332 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
TM9SF1-208ENST00000529332 RABEP1Q15276 862 aa19.41■□□□□ 0.7
TM9SF1-208ENST00000529332 MRC1P22897 1456 aa19.41■□□□□ 0.7
TM9SF1-208ENST00000529332 CYP27B1O15528 508 aa19.4■□□□□ 0.7
TM9SF1-208ENST00000529332 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
TM9SF1-208ENST00000529332 SSFA2P28290 1259 aa19.4■□□□□ 0.7
TM9SF1-208ENST00000529332 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.4■□□□□ 0.7
TM9SF1-208ENST00000529332 SLC4A10Q6U841 1118 aa19.4■□□□□ 0.7
TM9SF1-208ENST00000529332 CACNA1FO60840 1977 aa19.39■□□□□ 0.7
TM9SF1-208ENST00000529332 SPATA31A6Q5VVP1 1343 aa19.39■□□□□ 0.7
TM9SF1-208ENST00000529332 MRE11P49959 708 aa19.39■□□□□ 0.69
TM9SF1-208ENST00000529332 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
TM9SF1-208ENST00000529332 SLIT2O94813 1529 aa19.38■□□□□ 0.69
TM9SF1-208ENST00000529332 SLC52A2Q9HAB3 445 aa19.38■□□□□ 0.69
TM9SF1-208ENST00000529332 DISP2A7MBM2 1401 aa19.37■□□□□ 0.69
TM9SF1-208ENST00000529332 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
TM9SF1-208ENST00000529332 GRPEL1Q9HAV7 217 aa19.37■□□□□ 0.69
TM9SF1-208ENST00000529332 HMMRO75330 724 aa19.37■□□□□ 0.69
TM9SF1-208ENST00000529332 HOXB7P09629 217 aa19.37■□□□□ 0.69
TM9SF1-208ENST00000529332 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
TM9SF1-208ENST00000529332 EIF4A1P60842 406 aaKnown RBP19.36■□□□□ 0.69
TM9SF1-208ENST00000529332 CCDC30Q5VVM6 783 aa19.36■□□□□ 0.69
TM9SF1-208ENST00000529332 STK31Q9BXU1 1019 aa19.36■□□□□ 0.69
TM9SF1-208ENST00000529332 THRAP3Q9Y2W1 955 aaKnown RBP19.36■□□□□ 0.69
TM9SF1-208ENST00000529332 SKOR2Q2VWA4 1001 aaPredicted RBP19.35■□□□□ 0.69
TM9SF1-208ENST00000529332 GAS2L3Q86XJ1 694 aa19.35■□□□□ 0.69
TM9SF1-208ENST00000529332 CDCA7Q9BWT1 371 aaPredicted RBP19.35■□□□□ 0.69
TM9SF1-208ENST00000529332 AK9Q5TCS8 1911 aa19.35■□□□□ 0.69
TM9SF1-208ENST00000529332 CASC1Q6TDU7 716 aa19.34■□□□□ 0.69
TM9SF1-208ENST00000529332 OSBPL3Q9H4L5 887 aa19.34■□□□□ 0.69
TM9SF1-208ENST00000529332 ISY1Q9ULR0 285 aaKnown RBP19.34■□□□□ 0.69
TM9SF1-208ENST00000529332 PTMSP20962 102 aa19.34■□□□□ 0.69
TM9SF1-208ENST00000529332 PDE1AP54750 535 aa19.34■□□□□ 0.69
TM9SF1-208ENST00000529332 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
TM9SF1-208ENST00000529332 GNAI2P04899 355 aa19.33■□□□□ 0.69
TM9SF1-208ENST00000529332 CABP4P57796 275 aa19.33■□□□□ 0.69
TM9SF1-208ENST00000529332 DDX54Q8TDD1 881 aaKnown RBP19.33■□□□□ 0.69
TM9SF1-208ENST00000529332 SPATA31A1Q5TZJ5 1347 aa19.33■□□□□ 0.68
TM9SF1-208ENST00000529332 BAG4O95429 457 aaKnown RBP19.33■□□□□ 0.68
TM9SF1-208ENST00000529332 EXOC6BQ9Y2D4 811 aa19.33■□□□□ 0.68
TM9SF1-208ENST00000529332 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
TM9SF1-208ENST00000529332 FLIIQ13045 1269 aa19.32■□□□□ 0.68
TM9SF1-208ENST00000529332 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
TM9SF1-208ENST00000529332 REC8O95072 547 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 HSPA1LP34931 641 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 NGLY1Q96IV0 654 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 C8orf37Q96NL8 207 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 TNS2Q63HR2 1409 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 ERC2O15083 957 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 SALL3Q9BXA9 1300 aa19.31■□□□□ 0.68
TM9SF1-208ENST00000529332 KCNQ3O43525 872 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 TSHZ3Q63HK5 1081 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 SPATA31A5Q5VU36 1347 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 SPATA31A7Q8IWB4 1347 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 LRP6O75581 1613 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 TTC5Q8N0Z6 440 aa19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 CCDC9Q9Y3X0 531 aaKnown RBP19.3■□□□□ 0.68
TM9SF1-208ENST00000529332 TOGARAM1Q9Y4F4 1720 aa19.29■□□□□ 0.68
TM9SF1-208ENST00000529332 PNMA6EA0A0J9YXQ4 647 aa19.29■□□□□ 0.68
TM9SF1-208ENST00000529332 EXOC5O00471 708 aa19.29■□□□□ 0.68
TM9SF1-208ENST00000529332 PKP1Q13835 747 aa19.29■□□□□ 0.68
TM9SF1-208ENST00000529332 HEG1Q9ULI3 1381 aa19.29■□□□□ 0.68
TM9SF1-208ENST00000529332 GOLGA6L22H0YM25 854 aa19.28■□□□□ 0.68
TM9SF1-208ENST00000529332 ST18O60284 1047 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms