RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 UTYO14607 1347 aa13.13□□□□□ -0.31
PUF60-213ENST00000528999 KCNQ3O43525 872 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 PHKG2P15735 406 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 MCM2P49736 904 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 ANAPC15P60006 121 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 OTUD7AQ8TE49 926 aaPredicted RBP13.12□□□□□ -0.31
PUF60-213ENST00000528999 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 CWC22Q9HCG8 908 aaKnown RBP13.12□□□□□ -0.31
PUF60-213ENST00000528999 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
PUF60-213ENST00000528999 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
PUF60-213ENST00000528999 ST18O60284 1047 aa13.11□□□□□ -0.31
PUF60-213ENST00000528999 MCCP23508 829 aa13.11□□□□□ -0.31
PUF60-213ENST00000528999 CLEC17AQ6ZS10 378 aa13.11□□□□□ -0.31
PUF60-213ENST00000528999 NLRP2Q9NX02 1062 aa13.11□□□□□ -0.31
PUF60-213ENST00000528999 USP42Q9H9J4 1324 aaKnown RBP13.11□□□□□ -0.31
PUF60-213ENST00000528999 ADCY9O60503 1353 aa13.1□□□□□ -0.31
PUF60-213ENST00000528999 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
PUF60-213ENST00000528999 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
PUF60-213ENST00000528999 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
PUF60-213ENST00000528999 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
PUF60-213ENST00000528999 RHPN1Q8TCX5 695 aa13.1□□□□□ -0.31
PUF60-213ENST00000528999 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
PUF60-213ENST00000528999 TTC41PQ6P2S7 1318 aa13.1□□□□□ -0.31
PUF60-213ENST00000528999 PXDNQ92626 1479 aa13.1□□□□□ -0.31
PUF60-213ENST00000528999 SIPA1L3O60292 1781 aaPredicted RBP13.09□□□□□ -0.31
PUF60-213ENST00000528999 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
PUF60-213ENST00000528999 COL18A1P39060 1754 aa13.09□□□□□ -0.31
PUF60-213ENST00000528999 APBB1O00213 710 aa13.09□□□□□ -0.31
PUF60-213ENST00000528999 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
PUF60-213ENST00000528999 RAB3GAP1Q15042 981 aa13.09□□□□□ -0.31
PUF60-213ENST00000528999 SKOR2Q2VWA4 1001 aaPredicted RBP13.09□□□□□ -0.31
PUF60-213ENST00000528999 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
PUF60-213ENST00000528999 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
PUF60-213ENST00000528999 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
PUF60-213ENST00000528999 HSP90AA1P07900 732 aaKnown RBP13.08□□□□□ -0.32
PUF60-213ENST00000528999 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
PUF60-213ENST00000528999 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.32
PUF60-213ENST00000528999 CHMLP26374 656 aa13.08□□□□□ -0.32
PUF60-213ENST00000528999 NUCB2P80303 420 aa13.08□□□□□ -0.32
PUF60-213ENST00000528999 ISY1Q9ULR0 285 aaKnown RBP13.08□□□□□ -0.32
PUF60-213ENST00000528999 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
PUF60-213ENST00000528999 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
PUF60-213ENST00000528999 PDIA6Q15084 440 aa13.07□□□□□ -0.32
PUF60-213ENST00000528999 MRC1P22897 1456 aa13.07□□□□□ -0.32
PUF60-213ENST00000528999 COL15A1P39059 1388 aa13.07□□□□□ -0.32
PUF60-213ENST00000528999 GRM8O00222 908 aa13.06□□□□□ -0.32
PUF60-213ENST00000528999 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
PUF60-213ENST00000528999 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
PUF60-213ENST00000528999 L1TD1Q5T7N2 865 aaKnown RBP13.06□□□□□ -0.32
PUF60-213ENST00000528999 CLASRPQ8N2M8 674 aaKnown RBP13.06□□□□□ -0.32
PUF60-213ENST00000528999 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
PUF60-213ENST00000528999 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
PUF60-213ENST00000528999 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
PUF60-213ENST00000528999 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
PUF60-213ENST00000528999 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
PUF60-213ENST00000528999 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
PUF60-213ENST00000528999 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
PUF60-213ENST00000528999 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
PUF60-213ENST00000528999 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
PUF60-213ENST00000528999 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
PUF60-213ENST00000528999 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
PUF60-213ENST00000528999 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
PUF60-213ENST00000528999 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
PUF60-213ENST00000528999 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
PUF60-213ENST00000528999 RUFY2Q8WXA3 655 aa13.04□□□□□ -0.32
PUF60-213ENST00000528999 METTL22Q9BUU2 404 aaPredicted RBP13.04□□□□□ -0.32
PUF60-213ENST00000528999 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
PUF60-213ENST00000528999 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 TRAK2O60296 914 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 CABP4P57796 275 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 TICAM2Q86XR7 235 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
PUF60-213ENST00000528999 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
PUF60-213ENST00000528999 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 WDR17Q8IZU2 1322 aa13.03□□□□□ -0.32
PUF60-213ENST00000528999 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.32
PUF60-213ENST00000528999 HIP1O00291 1037 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 CYP27B1O15528 508 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
PUF60-213ENST00000528999 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■■■ 27.4
PUF60-213ENST00000528999 PROSER3Q2NL68 480 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
PUF60-213ENST00000528999 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 MEGF6O75095 1541 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 RGPD5Q99666 1765 aa13.02□□□□□ -0.33
PUF60-213ENST00000528999 ANXA1P04083 346 aa13.01□□□□□ -0.33
PUF60-213ENST00000528999 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
PUF60-213ENST00000528999 GCKRQ14397 625 aa13.01□□□□□ -0.33
PUF60-213ENST00000528999 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
PUF60-213ENST00000528999 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
PUF60-213ENST00000528999 CARD10Q9BWT7 1032 aa13.01□□□□□ -0.33
PUF60-213ENST00000528999 IL1RAPL2Q9NP60 686 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms