RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 A0A0G2JS52 829 aa9.9□□□□□ -0.82
ITGB1-218ENST00000528877 EVA1CP58658 441 aa9.9□□□□□ -0.82
ITGB1-218ENST00000528877 MYT1Q01538 1121 aa9.9□□□□□ -0.82
ITGB1-218ENST00000528877 NME9Q86XW9 330 aa9.9□□□□□ -0.82
ITGB1-218ENST00000528877 CDCA7LQ96GN5 454 aa9.9□□□□□ -0.82
ITGB1-218ENST00000528877 OVOS2A0A0G2JMS6 1433 aa9.9□□□□□ -0.83
ITGB1-218ENST00000528877 RREB1Q92766 1687 aa9.9□□□□□ -0.83
ITGB1-218ENST00000528877 PARD3Q8TEW0 1356 aa9.89□□□□□ -0.83
ITGB1-218ENST00000528877 RGPD5Q99666 1765 aa9.89□□□□□ -0.83
ITGB1-218ENST00000528877 C11orf95C9JLR9 678 aaPredicted RBP9.89□□□□□ -0.83
ITGB1-218ENST00000528877 CDCA8Q53HL2 280 aa9.89□□□□□ -0.83
ITGB1-218ENST00000528877 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
ITGB1-218ENST00000528877 PCGF6Q9BYE7 350 aa9.89□□□□□ -0.83
ITGB1-218ENST00000528877 TNS2Q63HR2 1409 aa9.89□□□□□ -0.83
ITGB1-218ENST00000528877 KIF20BQ96Q89 1820 aa9.89□□□□□ -0.83
ITGB1-218ENST00000528877 RTL1A6NKG5 1358 aa9.88□□□□□ -0.83
ITGB1-218ENST00000528877 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
ITGB1-218ENST00000528877 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
ITGB1-218ENST00000528877 SF3B2Q13435 895 aaKnown RBP9.88□□□□□ -0.83
ITGB1-218ENST00000528877 FAM196AQ6ZSG2 479 aa9.88□□□□□ -0.83
ITGB1-218ENST00000528877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.839e-7■■■□□ 16.9
ITGB1-218ENST00000528877 CDCA7Q9BWT1 371 aaPredicted RBP9.88□□□□□ -0.83
ITGB1-218ENST00000528877 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
ITGB1-218ENST00000528877 ANKRD26Q9UPS8 1709 aa9.87□□□□□ -0.83
ITGB1-218ENST00000528877 LRP5O75197 1615 aa9.87□□□□□ -0.83
ITGB1-218ENST00000528877 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
ITGB1-218ENST00000528877 WNT2BQ93097 391 aa9.87□□□□□ -0.83
ITGB1-218ENST00000528877 KCTD12Q96CX2 325 aaKnown RBP9.87□□□□□ -0.83
ITGB1-218ENST00000528877 CARD10Q9BWT7 1032 aa9.87□□□□□ -0.83
ITGB1-218ENST00000528877 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
ITGB1-218ENST00000528877 USP35Q9P2H5 1018 aa9.87□□□□□ -0.83
ITGB1-218ENST00000528877 BAG6P46379 1132 aa9.86□□□□□ -0.83
ITGB1-218ENST00000528877 TOM1L2Q6ZVM7 507 aa9.86□□□□□ -0.83
ITGB1-218ENST00000528877 DEFB132Q7Z7B7 95 aa9.86□□□□□ -0.83
ITGB1-218ENST00000528877 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
ITGB1-218ENST00000528877 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
ITGB1-218ENST00000528877 SBF2Q86WG5 1849 aa9.85□□□□□ -0.83
ITGB1-218ENST00000528877 KIF24Q5T7B8 1368 aa9.85□□□□□ -0.83
ITGB1-218ENST00000528877 NHSQ6T4R5 1651 aa9.84□□□□□ -0.83
ITGB1-218ENST00000528877 FCHSD2O94868 740 aa9.84□□□□□ -0.83
ITGB1-218ENST00000528877 PTGDRQ13258 359 aa9.84□□□□□ -0.83
ITGB1-218ENST00000528877 PDE3BQ13370 1112 aa9.84□□□□□ -0.83
ITGB1-218ENST00000528877 FAM182BQ5T319 152 aa9.84□□□□□ -0.83
ITGB1-218ENST00000528877 COG3Q96JB2 828 aa9.84□□□□□ -0.83
ITGB1-218ENST00000528877 NPDC1Q9NQX5 325 aaPredicted RBP9.84□□□□□ -0.83
ITGB1-218ENST00000528877 NSD3Q9BZ95 1437 aa9.83□□□□□ -0.84
ITGB1-218ENST00000528877 ZBTB7CA1YPR0 619 aa9.83□□□□□ -0.84
ITGB1-218ENST00000528877 DDB1Q16531 1140 aa9.83□□□□□ -0.84
ITGB1-218ENST00000528877 THSD4Q6ZMP0 1018 aa9.83□□□□□ -0.84
ITGB1-218ENST00000528877 TTC13Q8NBP0 860 aa9.83□□□□□ -0.84
ITGB1-218ENST00000528877 CCER1Q8TC90 406 aaPredicted RBP9.83□□□□□ -0.84
ITGB1-218ENST00000528877 IP6K1Q92551 441 aa9.83□□□□□ -0.84
ITGB1-218ENST00000528877 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
ITGB1-218ENST00000528877 MAP3K19Q56UN5 1328 aa9.82□□□□□ -0.84
ITGB1-218ENST00000528877 FYB1O15117 783 aa9.82□□□□□ -0.84
ITGB1-218ENST00000528877 CAMKK2Q96RR4 588 aa9.82□□□□□ -0.84
ITGB1-218ENST00000528877 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
ITGB1-218ENST00000528877 TRIM37O94972 964 aa9.81□□□□□ -0.84
ITGB1-218ENST00000528877 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
ITGB1-218ENST00000528877 HOXC9P31274 260 aa9.81□□□□□ -0.84
ITGB1-218ENST00000528877 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
ITGB1-218ENST00000528877 ANKRD24Q8TF21 1146 aa9.81□□□□□ -0.84
ITGB1-218ENST00000528877 TATDN2Q93075 761 aa9.81□□□□□ -0.84
ITGB1-218ENST00000528877 SEPT9Q9UHD8 586 aaPredicted RBP9.81□□□□□ -0.84
ITGB1-218ENST00000528877 SHANK3Q9BYB0 1731 aa9.81□□□□□ -0.84
ITGB1-218ENST00000528877 FLT4P35916 1363 aa9.8□□□□□ -0.84
ITGB1-218ENST00000528877 HIC1Q14526 733 aa9.8□□□□□ -0.84
ITGB1-218ENST00000528877 PADI6Q6TGC4 694 aa9.8□□□□□ -0.84
ITGB1-218ENST00000528877 NYAP1Q6ZVC0 841 aa9.8□□□□□ -0.84
ITGB1-218ENST00000528877 MARCH10Q8NA82 808 aaPredicted RBP9.8□□□□□ -0.84
ITGB1-218ENST00000528877 CARD14Q9BXL6 1004 aa9.8□□□□□ -0.84
ITGB1-218ENST00000528877 SMG6Q86US8 1419 aaKnown RBP9.8□□□□□ -0.84
ITGB1-218ENST00000528877 INSRP06213 1382 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 PLEKHG2Q9H7P9 1386 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 MEGF6O75095 1541 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 HSPA5P11021 654 aaKnown RBP9.79□□□□□ -0.84
ITGB1-218ENST00000528877 IL2RBP14784 551 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 CGNL1Q0VF96 1302 aa9.79□□□□□ -0.84
ITGB1-218ENST00000528877 PAPPAQ13219 1627 aa9.78□□□□□ -0.84
ITGB1-218ENST00000528877 NSD2O96028 1365 aa9.78□□□□□ -0.84
ITGB1-218ENST00000528877 APBA3O96018 575 aa9.78□□□□□ -0.84
ITGB1-218ENST00000528877 GGNBP2Q9H3C7 697 aa9.78□□□□□ -0.84
ITGB1-218ENST00000528877 NLRP2Q9NX02 1062 aa9.78□□□□□ -0.84
ITGB1-218ENST00000528877 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
ITGB1-218ENST00000528877 PKD1L3Q7Z443 1732 aa9.77□□□□□ -0.85
ITGB1-218ENST00000528877 PLSCR1O15162 318 aa9.77□□□□□ -0.85
ITGB1-218ENST00000528877 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
ITGB1-218ENST00000528877 EZH2Q15910 746 aaKnown RBP9.77□□□□□ -0.85
ITGB1-218ENST00000528877 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.85
ITGB1-218ENST00000528877 NUDT18Q6ZVK8 323 aa9.77□□□□□ -0.85
ITGB1-218ENST00000528877 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
ITGB1-218ENST00000528877 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.77□□□□□ -0.85
ITGB1-218ENST00000528877 RGPD2P0DJD1 1756 aa9.77□□□□□ -0.85
ITGB1-218ENST00000528877 EXOC5O00471 708 aa9.76□□□□□ -0.85
ITGB1-218ENST00000528877 AMPHP49418 695 aa9.76□□□□□ -0.85
ITGB1-218ENST00000528877 RRS1Q15050 365 aaKnown RBP9.76□□□□□ -0.85
ITGB1-218ENST00000528877 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms