RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 PRAM1Q96QH2 718 aa8.1□□□□□ -1.11
CHKA-204ENST00000528235 SYT17Q9BSW7 474 aa8.1□□□□□ -1.11
CHKA-204ENST00000528235 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
CHKA-204ENST00000528235 FHDC1Q9C0D6 1143 aaPredicted RBP8.1□□□□□ -1.11
CHKA-204ENST00000528235 ACIN1Q9UKV3 1341 aaKnown RBP8.09□□□□□ -1.11
CHKA-204ENST00000528235 WNK3Q9BYP7 1800 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 RCCD1A6NED2 376 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 PLSCR1O15162 318 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 OATP04181 439 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 PLCB2Q00722 1185 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 TCP11L2Q8N4U5 519 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 NKX2-3Q8TAU0 364 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 UTRNP46939 3433 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 PIK3C2GO75747 1445 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 PEAK1Q9H792 1746 aa8.09□□□□□ -1.11
CHKA-204ENST00000528235 EIF3AQ14152 1382 aaKnown RBP8.09□□□□□ -1.12
CHKA-204ENST00000528235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.08□□□□□ -1.12
CHKA-204ENST00000528235 GPR162Q16538 588 aa8.08□□□□□ -1.12
CHKA-204ENST00000528235 STK32BQ9NY57 414 aa8.08□□□□□ -1.12
CHKA-204ENST00000528235 OVOS2A0A0G2JMS6 1433 aa8.08□□□□□ -1.12
CHKA-204ENST00000528235 OVOS2A0A0J9YW53 1432 aa8.08□□□□□ -1.12
CHKA-204ENST00000528235 OVOS2Q6IE36 1432 aa8.08□□□□□ -1.12
CHKA-204ENST00000528235 SSH2Q76I76 1423 aa8.08□□□□□ -1.12
CHKA-204ENST00000528235 HIC1Q14526 733 aa8.07□□□□□ -1.12
CHKA-204ENST00000528235 HIRIP3Q9BW71 556 aaPredicted RBP8.07□□□□□ -1.12
CHKA-204ENST00000528235 PDGFDQ9GZP0 370 aaPredicted RBP8.07□□□□□ -1.12
CHKA-204ENST00000528235 THRAP3Q9Y2W1 955 aaKnown RBP8.07□□□□□ -1.12
CHKA-204ENST00000528235 RGPD5Q99666 1765 aa8.07□□□□□ -1.12
CHKA-204ENST00000528235 NRG2O14511 850 aaPredicted RBP8.06□□□□□ -1.12
CHKA-204ENST00000528235 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
CHKA-204ENST00000528235 FAM161AQ3B820 660 aa8.06□□□□□ -1.12
CHKA-204ENST00000528235 NUTM2GQ5VZR2 741 aa8.06□□□□□ -1.12
CHKA-204ENST00000528235 LARP1Q6PKG0 1096 aaKnown RBP8.06□□□□□ -1.12
CHKA-204ENST00000528235 MTFR1LQ9H019 292 aa8.06□□□□□ -1.12
CHKA-204ENST00000528235 C14orf93Q9H972 538 aaKnown RBP8.06□□□□□ -1.12
CHKA-204ENST00000528235 TULP4Q9NRJ4 1543 aa8.06□□□□□ -1.12
CHKA-204ENST00000528235 LRRC37A3O60309 1634 aa8.06□□□□□ -1.12
CHKA-204ENST00000528235 MINK1Q8N4C8 1332 aaPredicted RBP8.05□□□□□ -1.12
CHKA-204ENST00000528235 CEP350Q5VT06 3117 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 LMO7Q8WWI1 1683 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 DDB1Q16531 1140 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 CFAP70Q5T0N1 1121 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 BLOC1S3Q6QNY0 202 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 ARXQ96QS3 562 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 ATP7BP35670 1465 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 TOPAZ1Q8N9V7 1692 aa8.05□□□□□ -1.12
CHKA-204ENST00000528235 SPATA31E1Q6ZUB1 1445 aa8.04□□□□□ -1.12
CHKA-204ENST00000528235 SHANK3Q9BYB0 1731 aa8.04□□□□□ -1.12
CHKA-204ENST00000528235 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
CHKA-204ENST00000528235 CFHP08603 1231 aa8.04□□□□□ -1.12
CHKA-204ENST00000528235 SLC15A2Q16348 729 aa8.04□□□□□ -1.12
CHKA-204ENST00000528235 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
CHKA-204ENST00000528235 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
CHKA-204ENST00000528235 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
CHKA-204ENST00000528235 WASLO00401 505 aaPredicted RBP8.03□□□□□ -1.12
CHKA-204ENST00000528235 TXNRD1Q16881 649 aa8.03□□□□□ -1.12
CHKA-204ENST00000528235 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
CHKA-204ENST00000528235 TRAK1Q9UPV9 953 aa8.03□□□□□ -1.12
CHKA-204ENST00000528235 QSER1Q2KHR3 1735 aa8.03□□□□□ -1.12
CHKA-204ENST00000528235 CRB1P82279 1406 aa8.03□□□□□ -1.12
CHKA-204ENST00000528235 NR1I2O75469 434 aa8.02□□□□□ -1.13
CHKA-204ENST00000528235 PPARGC1BQ86YN6 1023 aaKnown RBP8.02□□□□□ -1.13
CHKA-204ENST00000528235 ABTB2Q8N961 1025 aa8.02□□□□□ -1.13
CHKA-204ENST00000528235 PDZRN3Q9UPQ7 1066 aa8.02□□□□□ -1.13
CHKA-204ENST00000528235 ARHGEF28Q8N1W1 1705 aaKnown RBP8.01□□□□□ -1.13
CHKA-204ENST00000528235 RBM26Q5T8P6 1007 aaKnown RBP8.01□□□□□ -1.13
CHKA-204ENST00000528235 METTL3Q86U44 580 aaKnown RBP8.01□□□□□ -1.13
CHKA-204ENST00000528235 BTAF1O14981 1849 aa8.01□□□□□ -1.13
CHKA-204ENST00000528235 COL5A2P05997 1499 aaPredicted RBP8□□□□□ -1.13
CHKA-204ENST00000528235 CPDO75976 1380 aa8□□□□□ -1.13
CHKA-204ENST00000528235 MAP3K5Q99683 1374 aa8□□□□□ -1.13
CHKA-204ENST00000528235 RNF223E7ERA6 249 aa8□□□□□ -1.13
CHKA-204ENST00000528235 GNPATO15228 680 aa8□□□□□ -1.13
CHKA-204ENST00000528235 SLC10A3P09131 477 aa8□□□□□ -1.13
CHKA-204ENST00000528235 POLD1P28340 1107 aa8□□□□□ -1.13
CHKA-204ENST00000528235 TOM1L2Q6ZVM7 507 aa8□□□□□ -1.13
CHKA-204ENST00000528235 PTF1AQ7RTS3 328 aa8□□□□□ -1.13
CHKA-204ENST00000528235 NLRP13Q86W25 1043 aa8□□□□□ -1.13
CHKA-204ENST00000528235 NUDT16Q96DE0 195 aaKnown RBP8□□□□□ -1.13
CHKA-204ENST00000528235 COL24A1Q17RW2 1714 aa8□□□□□ -1.13
CHKA-204ENST00000528235 NHSQ6T4R5 1651 aa7.99□□□□□ -1.13
CHKA-204ENST00000528235 TUBGCP6Q96RT7 1819 aa7.99□□□□□ -1.13
CHKA-204ENST00000528235 SLC19A1P41440 591 aa7.99□□□□□ -1.13
CHKA-204ENST00000528235 ANKLE1Q8NAG6 615 aa7.99□□□□□ -1.13
CHKA-204ENST00000528235 COL18A1P39060 1754 aa7.98□□□□□ -1.13
CHKA-204ENST00000528235 TLL1O43897 1013 aa7.98□□□□□ -1.13
CHKA-204ENST00000528235 GRIN3BO60391 1043 aa7.98□□□□□ -1.13
CHKA-204ENST00000528235 GCP02774 474 aa7.98□□□□□ -1.13
CHKA-204ENST00000528235 HSPA6P17066 643 aa7.98□□□□□ -1.13
CHKA-204ENST00000528235 MARCH10Q8NA82 808 aaPredicted RBP7.98□□□□□ -1.13
CHKA-204ENST00000528235 CDCA7Q9BWT1 371 aaPredicted RBP7.98□□□□□ -1.13
CHKA-204ENST00000528235 GPBP1L1Q9HC44 474 aaPredicted RBP7.98□□□□□ -1.13
CHKA-204ENST00000528235 ACEP12821 1306 aa7.98□□□□□ -1.13
CHKA-204ENST00000528235 ADGRB1O14514 1584 aa7.97□□□□□ -1.13
CHKA-204ENST00000528235 EXOC5O00471 708 aa7.97□□□□□ -1.13
CHKA-204ENST00000528235 ADH1BP00325 375 aa7.97□□□□□ -1.13
CHKA-204ENST00000528235 MPHOSPH9Q99550 1183 aa7.97□□□□□ -1.13
CHKA-204ENST00000528235 PAPPAQ13219 1627 aa7.96□□□□□ -1.13
CHKA-204ENST00000528235 BCL9O00512 1426 aa7.96□□□□□ -1.13
CHKA-204ENST00000528235 S1PR4O95977 384 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms