RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 WWC3Q9ULE0 1092 aa11.45□□□□□ -0.58
CHD7-206ENST00000527900 PARP3Q9Y6F1 533 aa11.45□□□□□ -0.58
CHD7-206ENST00000527900 ATP10DQ9P241 1426 aa11.44□□□□□ -0.58
CHD7-206ENST00000527900 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
CHD7-206ENST00000527900 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
CHD7-206ENST00000527900 ZNF496Q96IT1 587 aaPredicted RBP11.44□□□□□ -0.58
CHD7-206ENST00000527900 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
CHD7-206ENST00000527900 NARFQ9UHQ1 456 aa11.44□□□□□ -0.58
CHD7-206ENST00000527900 ZBTB1Q9Y2K1 713 aa11.44□□□□□ -0.58
CHD7-206ENST00000527900 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
CHD7-206ENST00000527900 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
CHD7-206ENST00000527900 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
CHD7-206ENST00000527900 EIF5P55010 431 aaKnown RBP11.43□□□□□ -0.58
CHD7-206ENST00000527900 USPL1Q5W0Q7 1092 aa11.43□□□□□ -0.58
CHD7-206ENST00000527900 COL15A1P39059 1388 aa11.42□□□□□ -0.58
CHD7-206ENST00000527900 HEG1Q9ULI3 1381 aa11.42□□□□□ -0.58
CHD7-206ENST00000527900 GIGYF1O75420 1035 aaPredicted RBP11.42□□□□□ -0.58
CHD7-206ENST00000527900 FCHSD2O94868 740 aa11.42□□□□□ -0.58
CHD7-206ENST00000527900 CFAP53Q96M91 514 aa11.42□□□□□ -0.58
CHD7-206ENST00000527900 KCNQ3O43525 872 aa11.41□□□□□ -0.58
CHD7-206ENST00000527900 ZPR1O75312 459 aa11.41□□□□□ -0.58
CHD7-206ENST00000527900 TEFQ10587 303 aa11.41□□□□□ -0.58
CHD7-206ENST00000527900 NFIXQ14938 502 aa11.41□□□□□ -0.58
CHD7-206ENST00000527900 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
CHD7-206ENST00000527900 STARD3NLO95772 234 aa11.4□□□□□ -0.58
CHD7-206ENST00000527900 TTC5Q8N0Z6 440 aa11.4□□□□□ -0.58
CHD7-206ENST00000527900 TEX13AQ9BXU3 409 aaPredicted RBP11.4□□□□□ -0.58
CHD7-206ENST00000527900 PIM2Q9P1W9 311 aa11.4□□□□□ -0.58
CHD7-206ENST00000527900 NUDCQ9Y266 331 aa11.4□□□□□ -0.58
CHD7-206ENST00000527900 CEP350Q5VT06 3117 aa11.4□□□□□ -0.59
CHD7-206ENST00000527900 SBF1O95248 1867 aa11.39□□□□□ -0.59
CHD7-206ENST00000527900 U2AF1L5P0DN76 240 aaPredicted RBP11.39□□□□□ -0.59
CHD7-206ENST00000527900 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
CHD7-206ENST00000527900 U2AF1Q01081 240 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHD7-206ENST00000527900 GPBP1L1Q9HC44 474 aaPredicted RBP11.39□□□□□ -0.59
CHD7-206ENST00000527900 DLEC1Q9Y238 1755 aa11.39□□□□□ -0.59
CHD7-206ENST00000527900 BTBD11A6QL63 1104 aa11.38□□□□□ -0.59
CHD7-206ENST00000527900 HTATSF1O43719 755 aaKnown RBP11.38□□□□□ -0.59
CHD7-206ENST00000527900 A1BGP04217 495 aa11.38□□□□□ -0.59
CHD7-206ENST00000527900 CHRNA5P30532 468 aa11.38□□□□□ -0.59
CHD7-206ENST00000527900 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
CHD7-206ENST00000527900 FMNL2Q96PY5 1086 aa11.38□□□□□ -0.59
CHD7-206ENST00000527900 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 SCN7AQ01118 1682 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 A0A087WZG4 1122 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 KIF3CO14782 793 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 SERPINB2P05120 415 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 DALRD3Q5D0E6 543 aaKnown RBP11.37□□□□□ -0.59
CHD7-206ENST00000527900 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 MCM10Q7L590 875 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 PLEKHF1Q96S99 279 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 USP16Q9Y5T5 823 aa11.37□□□□□ -0.59
CHD7-206ENST00000527900 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
CHD7-206ENST00000527900 SENP3-EIF4A1A0A087X0R7 540 aa11.36□□□□□ -0.59
CHD7-206ENST00000527900 TBC1D9BQ66K14 1250 aa11.36□□□□□ -0.59
CHD7-206ENST00000527900 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
CHD7-206ENST00000527900 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
CHD7-206ENST00000527900 CAMTA2O94983 1202 aa11.35□□□□□ -0.59
CHD7-206ENST00000527900 DCTN1Q14203 1278 aa11.35□□□□□ -0.59
CHD7-206ENST00000527900 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
CHD7-206ENST00000527900 CARMIL3Q8ND23 1372 aa11.35□□□□□ -0.59
CHD7-206ENST00000527900 BCORQ6W2J9 1755 aa11.35□□□□□ -0.59
CHD7-206ENST00000527900 SNRPA1P09661 255 aaKnown RBP11.34□□□□□ -0.59
CHD7-206ENST00000527900 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
CHD7-206ENST00000527900 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
CHD7-206ENST00000527900 PRELPP51888 382 aa11.33□□□□□ -0.6
CHD7-206ENST00000527900 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
CHD7-206ENST00000527900 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
CHD7-206ENST00000527900 KDM3BQ7LBC6 1761 aa11.32□□□□□ -0.6
CHD7-206ENST00000527900 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
CHD7-206ENST00000527900 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
CHD7-206ENST00000527900 PRR5LQ6MZQ0 368 aa11.32□□□□□ -0.6
CHD7-206ENST00000527900 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
CHD7-206ENST00000527900 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
CHD7-206ENST00000527900 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
CHD7-206ENST00000527900 BRIP1Q9BX63 1249 aa11.32□□□□□ -0.6
CHD7-206ENST00000527900 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
CHD7-206ENST00000527900 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
CHD7-206ENST00000527900 H0YIN7 160 aa11.31□□□□□ -0.6
CHD7-206ENST00000527900 RGL2O15211 777 aa11.31□□□□□ -0.6
CHD7-206ENST00000527900 HSPA6P17066 643 aa11.31□□□□□ -0.6
CHD7-206ENST00000527900 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
CHD7-206ENST00000527900 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
CHD7-206ENST00000527900 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
CHD7-206ENST00000527900 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
CHD7-206ENST00000527900 TTLL6Q8N841 843 aa11.31□□□□□ -0.6
CHD7-206ENST00000527900 MIS18AQ9NYP9 233 aa11.31□□□□□ -0.6
CHD7-206ENST00000527900 COL11A2P13942 1736 aaPredicted RBP11.31□□□□□ -0.6
CHD7-206ENST00000527900 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
CHD7-206ENST00000527900 SETDB2Q96T68 719 aa11.3□□□□□ -0.6
CHD7-206ENST00000527900 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
CHD7-206ENST00000527900 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
CHD7-206ENST00000527900 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
CHD7-206ENST00000527900 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
CHD7-206ENST00000527900 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
CHD7-206ENST00000527900 NFKBIEO00221 500 aa11.29□□□□□ -0.6
CHD7-206ENST00000527900 TOMM70O94826 608 aa11.29□□□□□ -0.6
CHD7-206ENST00000527900 PDE6BP35913 854 aa11.29□□□□□ -0.6
CHD7-206ENST00000527900 EIF4A1P60842 406 aaKnown RBP11.29□□□□□ -0.6
CHD7-206ENST00000527900 RALBP1Q15311 655 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms