RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 NFIXQ14938 502 aa16.86■□□□□ 0.29
SRPRA-202ENST00000527817 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
SRPRA-202ENST00000527817 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
SRPRA-202ENST00000527817 SERPINB2P05120 415 aa16.85■□□□□ 0.29
SRPRA-202ENST00000527817 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
SRPRA-202ENST00000527817 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
SRPRA-202ENST00000527817 PANK3Q9H999 370 aa16.85■□□□□ 0.29
SRPRA-202ENST00000527817 SLC52A2Q9HAB3 445 aa16.85■□□□□ 0.29
SRPRA-202ENST00000527817 TJP1Q07157 1748 aa16.84■□□□□ 0.29
SRPRA-202ENST00000527817 HSPA1AP0DMV8 641 aaKnown RBP16.84■□□□□ 0.29
SRPRA-202ENST00000527817 HSPA1BP0DMV9 641 aaKnown RBP16.84■□□□□ 0.29
SRPRA-202ENST00000527817 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
SRPRA-202ENST00000527817 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
SRPRA-202ENST00000527817 POTECB2RU33 542 aa16.83■□□□□ 0.28
SRPRA-202ENST00000527817 H0YIN7 160 aa16.83■□□□□ 0.28
SRPRA-202ENST00000527817 IL13P35225 146 aa16.83■□□□□ 0.28
SRPRA-202ENST00000527817 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.28
SRPRA-202ENST00000527817 MORC1Q86VD1 984 aa16.83■□□□□ 0.28
SRPRA-202ENST00000527817 C2CD5Q86YS7 1000 aa16.82■□□□□ 0.28
SRPRA-202ENST00000527817 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
SRPRA-202ENST00000527817 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
SRPRA-202ENST00000527817 NFKBIEO00221 500 aa16.81■□□□□ 0.28
SRPRA-202ENST00000527817 RNMTO43148 476 aaKnown RBP16.81■□□□□ 0.28
SRPRA-202ENST00000527817 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
SRPRA-202ENST00000527817 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
SRPRA-202ENST00000527817 SCN11AQ9UI33 1791 aa16.81■□□□□ 0.28
SRPRA-202ENST00000527817 COL15A1P39059 1388 aa16.8■□□□□ 0.28
SRPRA-202ENST00000527817 NRXN2Q9P2S2 1712 aa16.8■□□□□ 0.28
SRPRA-202ENST00000527817 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
SRPRA-202ENST00000527817 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
SRPRA-202ENST00000527817 A0A087WZG4 1122 aa16.77■□□□□ 0.28
SRPRA-202ENST00000527817 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.28
SRPRA-202ENST00000527817 STARD3NLO95772 234 aa16.76■□□□□ 0.27
SRPRA-202ENST00000527817 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
SRPRA-202ENST00000527817 PDE6BP35913 854 aa16.76■□□□□ 0.27
SRPRA-202ENST00000527817 ERFEQ4G0M1 354 aa16.76■□□□□ 0.27
SRPRA-202ENST00000527817 BRIP1Q9BX63 1249 aa16.76■□□□□ 0.27
SRPRA-202ENST00000527817 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
SRPRA-202ENST00000527817 DLEC1Q9Y238 1755 aa16.76■□□□□ 0.27
SRPRA-202ENST00000527817 C21orf2O43822 256 aa16.75■□□□□ 0.27
SRPRA-202ENST00000527817 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
SRPRA-202ENST00000527817 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
SRPRA-202ENST00000527817 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
SRPRA-202ENST00000527817 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.271e-7■□□□□ 8.8
SRPRA-202ENST00000527817 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
SRPRA-202ENST00000527817 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
SRPRA-202ENST00000527817 MRC1P22897 1456 aa16.73■□□□□ 0.27
SRPRA-202ENST00000527817 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
SRPRA-202ENST00000527817 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
SRPRA-202ENST00000527817 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
SRPRA-202ENST00000527817 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
SRPRA-202ENST00000527817 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
SRPRA-202ENST00000527817 DICER1Q9UPY3 1922 aaKnown RBP16.72■□□□□ 0.27
SRPRA-202ENST00000527817 HMOX1P09601 288 aa16.71■□□□□ 0.27
SRPRA-202ENST00000527817 PRR5LQ6MZQ0 368 aa16.71■□□□□ 0.27
SRPRA-202ENST00000527817 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
SRPRA-202ENST00000527817 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
SRPRA-202ENST00000527817 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
SRPRA-202ENST00000527817 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
SRPRA-202ENST00000527817 FER1L6Q2WGJ9 1857 aa16.7■□□□□ 0.26
SRPRA-202ENST00000527817 DDNO94850 711 aaPredicted RBP16.7■□□□□ 0.26
SRPRA-202ENST00000527817 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
SRPRA-202ENST00000527817 TAOK3Q9H2K8 898 aa16.7■□□□□ 0.26
SRPRA-202ENST00000527817 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
SRPRA-202ENST00000527817 POTEIP0CG38 1075 aa16.69■□□□□ 0.26
SRPRA-202ENST00000527817 POTEJP0CG39 1038 aa16.69■□□□□ 0.26
SRPRA-202ENST00000527817 IL6STP40189 918 aaPredicted RBP16.69■□□□□ 0.26
SRPRA-202ENST00000527817 TRIM26Q12899 539 aaPredicted RBP16.69■□□□□ 0.26
SRPRA-202ENST00000527817 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
SRPRA-202ENST00000527817 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
SRPRA-202ENST00000527817 STYK1Q6J9G0 422 aa16.69■□□□□ 0.26
SRPRA-202ENST00000527817 TBC1D2BQ9UPU7 963 aa16.69■□□□□ 0.26
SRPRA-202ENST00000527817 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
SRPRA-202ENST00000527817 FOXN1O15353 648 aa16.68■□□□□ 0.26
SRPRA-202ENST00000527817 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
SRPRA-202ENST00000527817 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
SRPRA-202ENST00000527817 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
SRPRA-202ENST00000527817 SETDB2Q96T68 719 aa16.68■□□□□ 0.26
SRPRA-202ENST00000527817 PASKQ96RG2 1323 aa16.68■□□□□ 0.26
SRPRA-202ENST00000527817 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
SRPRA-202ENST00000527817 CNTNAP1P78357 1384 aa16.67■□□□□ 0.26
SRPRA-202ENST00000527817 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
SRPRA-202ENST00000527817 SRGNP10124 158 aa16.67■□□□□ 0.26
SRPRA-202ENST00000527817 LDHDQ86WU2 507 aa16.67■□□□□ 0.26
SRPRA-202ENST00000527817 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
SRPRA-202ENST00000527817 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
SRPRA-202ENST00000527817 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
SRPRA-202ENST00000527817 HEG1Q9ULI3 1381 aa16.66■□□□□ 0.26
SRPRA-202ENST00000527817 DIAPH1O60610 1272 aaKnown RBP16.66■□□□□ 0.26
SRPRA-202ENST00000527817 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
SRPRA-202ENST00000527817 UBR2Q8IWV8 1755 aa16.65■□□□□ 0.26
SRPRA-202ENST00000527817 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
SRPRA-202ENST00000527817 ST5P78524 1137 aa16.65■□□□□ 0.26
SRPRA-202ENST00000527817 TEFQ10587 303 aa16.65■□□□□ 0.26
SRPRA-202ENST00000527817 PRPF40BQ6NWY9 871 aaKnown RBP16.65■□□□□ 0.26
SRPRA-202ENST00000527817 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
SRPRA-202ENST00000527817 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
SRPRA-202ENST00000527817 C7orf43Q8WVR3 580 aa16.65■□□□□ 0.26
SRPRA-202ENST00000527817 TAF1DQ9H5J8 278 aaPredicted RBP16.65■□□□□ 0.26
SRPRA-202ENST00000527817 SLX4Q8IY92 1834 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms