RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 DNA2P51530 1060 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 CALML4Q96GE6 196 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 PSMD1Q99460 953 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-213ENST00000526357 TNNT1P13805 278 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 MTIF2P46199 727 aaKnown RBP10.88□□□□□ -0.67
CTNND1-213ENST00000526357 CBX1P83916 185 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 CYB5RLQ6IPT4 315 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 C8orf76Q96K31 380 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 STARD3NLO95772 234 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 LRRC27Q9C0I9 530 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 ABCF2Q9UG63 623 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 IFIT1P09914 478 aaKnown RBP10.88□□□□□ -0.67
CTNND1-213ENST00000526357 CDCA7LQ96GN5 454 aa10.88□□□□□ -0.67
CTNND1-213ENST00000526357 CCDC194A0A1B0GVG4 234 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 CCDC172P0C7W6 258 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 MRPS9P82933 396 aaKnown RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 CNNM3Q8NE01 707 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 FBF1Q8TES7 1133 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 CCDC12Q8WUD4 166 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 NSRP1Q9H0G5 558 aaKnown RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 SLC12A7Q9Y666 1083 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 HSF2BPO75031 334 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 CCDC40Q4G0X9 1142 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 SMARCA4P51532 1647 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 MINDY4BA8MYZ0 360 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 BICDL1Q6ZP65 573 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 NAPBQ9H115 298 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 RNF41Q9H4P4 317 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 PRC1O43663 620 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 IQCA1Q86XH1 822 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 EHBP1Q8NDI1 1231 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 NLRP5P59047 1200 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
CTNND1-213ENST00000526357 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-213ENST00000526357 CKAP4Q07065 602 aaKnown RBP10.86□□□□□ -0.67
CTNND1-213ENST00000526357 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
CTNND1-213ENST00000526357 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 A0A1W2PRG0 241 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 PRPF4BQ13523 1007 aaKnown RBP10.86□□□□□ -0.67
CTNND1-213ENST00000526357 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 KIF1BPQ96EK5 621 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 GPATCH11Q8N954 259 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 MPHOSPH6Q99547 160 aaKnown RBP10.86□□□□□ -0.67
CTNND1-213ENST00000526357 GLRX3O76003 335 aaKnown RBP10.86□□□□□ -0.67
CTNND1-213ENST00000526357 LIG1P18858 919 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 MAP3K12Q12852 859 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 CPLX3Q8WVH0 158 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 PLVAPQ9BX97 442 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 IL1RAPL2Q9NP60 686 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 ANKRD30BQ9BXX2 1392 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 NUTM1Q86Y26 1132 aa10.86□□□□□ -0.67
CTNND1-213ENST00000526357 NOP2P46087 812 aaKnown RBP10.85□□□□□ -0.67
CTNND1-213ENST00000526357 MAPK8IP2Q13387 824 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-213ENST00000526357 KIAA0753Q2KHM9 967 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 PRPF40BQ6NWY9 871 aaKnown RBP10.85□□□□□ -0.67
CTNND1-213ENST00000526357 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 TIGD1Q96MW7 591 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 TTC12Q9H892 705 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-213ENST00000526357 GOLIM4O00461 696 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 PRAM1Q96QH2 718 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 HSPA4P34932 840 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 KANK3Q6NY19 840 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 CDK19Q9BWU1 502 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 MXRA7P84157 204 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 CATIPQ7Z7H3 387 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 SYCP3Q8IZU3 236 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 TCP11L1Q9NUJ3 509 aa10.85□□□□□ -0.67
CTNND1-213ENST00000526357 STX1AQ16623 288 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 TBC1D5Q92609 795 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 IQCGQ9H095 443 aaKnown RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 DDX19AQ9NUU7 478 aaKnown RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 SLC5A1P13866 664 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 CCDC6Q16204 474 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 GOLGA8AA7E2F4 631 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 GOLGA8BA8MQT2 603 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 ZPR1O75312 459 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 GTF2F1P35269 517 aaKnown RBP eCLIP10.84□□□□□ -0.675e-6■■■□□ 17.8
CTNND1-213ENST00000526357 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 PUF60Q9UHX1 559 aaKnown RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 RASAL2Q9UJF2 1139 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 KIF4AO95239 1232 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 MX1P20591 662 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 TCERG1LQ5VWI1 586 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 DDX46Q7L014 1031 aaKnown RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 STMN4Q9H169 189 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 TMX1Q9H3N1 280 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 SERPINA10Q9UK55 444 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 ZNF213O14771 459 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
CTNND1-213ENST00000526357 ANKIB1Q9P2G1 1089 aa10.84□□□□□ -0.67
CTNND1-213ENST00000526357 FERMT3Q86UX7 667 aa10.83□□□□□ -0.68
CTNND1-213ENST00000526357 OSCARQ8IYS5 282 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms