RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 TM4SF1P30408 202 aa17.21■□□□□ 0.35
CCDC90B-205ENST00000525916 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
CCDC90B-205ENST00000525916 INTS5Q6P9B9 1019 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-205ENST00000525916 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
CCDC90B-205ENST00000525916 FER1L6Q2WGJ9 1857 aa17.2■□□□□ 0.34
CCDC90B-205ENST00000525916 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
CCDC90B-205ENST00000525916 USPL1Q5W0Q7 1092 aa17.2■□□□□ 0.34
CCDC90B-205ENST00000525916 COL11A2P13942 1736 aaPredicted RBP17.19■□□□□ 0.34
CCDC90B-205ENST00000525916 GLTPD2A6NH11 291 aa17.19■□□□□ 0.34
CCDC90B-205ENST00000525916 ZPR1O75312 459 aa17.19■□□□□ 0.34
CCDC90B-205ENST00000525916 LMNB1P20700 586 aa17.19■□□□□ 0.34
CCDC90B-205ENST00000525916 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
CCDC90B-205ENST00000525916 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-205ENST00000525916 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
CCDC90B-205ENST00000525916 SOS1Q07889 1333 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-205ENST00000525916 UBR2Q8IWV8 1755 aa17.17■□□□□ 0.34
CCDC90B-205ENST00000525916 NFIXQ14938 502 aa17.17■□□□□ 0.34
CCDC90B-205ENST00000525916 COL15A1P39059 1388 aa17.16■□□□□ 0.34
CCDC90B-205ENST00000525916 CLSPNQ9HAW4 1339 aa17.16■□□□□ 0.34
CCDC90B-205ENST00000525916 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
CCDC90B-205ENST00000525916 MRC1P22897 1456 aa17.15■□□□□ 0.34
CCDC90B-205ENST00000525916 SCN7AQ01118 1682 aa17.14■□□□□ 0.33
CCDC90B-205ENST00000525916 NFKBIEO00221 500 aa17.14■□□□□ 0.33
CCDC90B-205ENST00000525916 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
CCDC90B-205ENST00000525916 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 POTECB2RU33 542 aa17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 SERPINB2P05120 415 aa17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 ZBTB1Q9Y2K1 713 aa17.13■□□□□ 0.33
CCDC90B-205ENST00000525916 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
CCDC90B-205ENST00000525916 C2CD5Q86YS7 1000 aa17.12■□□□□ 0.33
CCDC90B-205ENST00000525916 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
CCDC90B-205ENST00000525916 SLX4Q8IY92 1834 aa17.12■□□□□ 0.33
CCDC90B-205ENST00000525916 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
CCDC90B-205ENST00000525916 LGR6Q9HBX8 967 aa17.1■□□□□ 0.33
CCDC90B-205ENST00000525916 H0YIN7 160 aa17.09■□□□□ 0.33
CCDC90B-205ENST00000525916 SCN4AP35499 1836 aa17.08■□□□□ 0.33
CCDC90B-205ENST00000525916 DPY19L2Q6NUT2 758 aa17.08■□□□□ 0.32
CCDC90B-205ENST00000525916 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.32
CCDC90B-205ENST00000525916 PANK3Q9H999 370 aa17.08■□□□□ 0.32
CCDC90B-205ENST00000525916 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
CCDC90B-205ENST00000525916 MKRN1Q9UHC7 482 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-205ENST00000525916 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
CCDC90B-205ENST00000525916 BCORQ6W2J9 1755 aa17.07■□□□□ 0.32
CCDC90B-205ENST00000525916 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-205ENST00000525916 IL13P35225 146 aa17.07■□□□□ 0.32
CCDC90B-205ENST00000525916 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
CCDC90B-205ENST00000525916 C21orf2O43822 256 aa17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 POTEIP0CG38 1075 aa17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 ERFEQ4G0M1 354 aa17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 CCER1Q8TC90 406 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
CCDC90B-205ENST00000525916 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
CCDC90B-205ENST00000525916 CCDC24Q8N4L8 307 aa17.05■□□□□ 0.32
CCDC90B-205ENST00000525916 FOXN1O15353 648 aa17.04■□□□□ 0.32
CCDC90B-205ENST00000525916 TBC1D9BQ66K14 1250 aa17.04■□□□□ 0.32
CCDC90B-205ENST00000525916 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-205ENST00000525916 VSIG10Q8N0Z9 540 aa17.03■□□□□ 0.32
CCDC90B-205ENST00000525916 CNTNAP1P78357 1384 aa17.02■□□□□ 0.32
CCDC90B-205ENST00000525916 HMOX1P09601 288 aa17.02■□□□□ 0.32
CCDC90B-205ENST00000525916 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
CCDC90B-205ENST00000525916 LTBP3Q9NS15 1303 aa17.01■□□□□ 0.31
CCDC90B-205ENST00000525916 PDE6BP35913 854 aa17.01■□□□□ 0.31
CCDC90B-205ENST00000525916 PRR5LQ6MZQ0 368 aa17.01■□□□□ 0.31
CCDC90B-205ENST00000525916 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
CCDC90B-205ENST00000525916 TAOK3Q9H2K8 898 aa17.01■□□□□ 0.31
CCDC90B-205ENST00000525916 MTHFSDQ2M296 383 aaKnown RBP17■□□□□ 0.31
CCDC90B-205ENST00000525916 TIMELESSQ9UNS1 1208 aa17■□□□□ 0.31
CCDC90B-205ENST00000525916 ADAMTSL1Q8N6G6 1762 aa17■□□□□ 0.31
CCDC90B-205ENST00000525916 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
CCDC90B-205ENST00000525916 ZNF330Q9Y3S2 320 aaPredicted RBP16.99■□□□□ 0.31
CCDC90B-205ENST00000525916 PASKQ96RG2 1323 aa16.98■□□□□ 0.31
CCDC90B-205ENST00000525916 A0A087WZG4 1122 aa16.98■□□□□ 0.31
CCDC90B-205ENST00000525916 STARD3NLO95772 234 aa16.98■□□□□ 0.31
CCDC90B-205ENST00000525916 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-205ENST00000525916 TTC5Q8N0Z6 440 aa16.98■□□□□ 0.31
CCDC90B-205ENST00000525916 PRDM10Q9NQV6 1147 aa16.98■□□□□ 0.31
CCDC90B-205ENST00000525916 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
CCDC90B-205ENST00000525916 PRPF40BQ6NWY9 871 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-205ENST00000525916 HEG1Q9ULI3 1381 aa16.97■□□□□ 0.31
CCDC90B-205ENST00000525916 NPHP1O15259 732 aa16.96■□□□□ 0.31
CCDC90B-205ENST00000525916 LDHDQ86WU2 507 aa16.96■□□□□ 0.31
CCDC90B-205ENST00000525916 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
CCDC90B-205ENST00000525916 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-205ENST00000525916 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
CCDC90B-205ENST00000525916 IQCA1LA6NCM1 817 aa16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 VEGFBP49765 207 aa16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 EIF4G2P78344 907 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 STYK1Q6J9G0 422 aa16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 CNKSR1Q969H4 720 aa16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 AIDAQ96BJ3 306 aa16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 TAF1DQ9H5J8 278 aaPredicted RBP16.95■□□□□ 0.3
CCDC90B-205ENST00000525916 SRGNP10124 158 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms