RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 TJP1Q07157 1748 aa16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 FCHSD2O94868 740 aa16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 TEFQ10587 303 aa16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 RSPH6AQ9H0K4 717 aa16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 BCL2L12Q9HB09 334 aa16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 WWC3Q9ULE0 1092 aa16.97■□□□□ 0.31
TOP1MT-217ENST00000523417 A0A087WZG4 1122 aa16.96■□□□□ 0.31
TOP1MT-217ENST00000523417 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
TOP1MT-217ENST00000523417 NFIXQ14938 502 aa16.96■□□□□ 0.31
TOP1MT-217ENST00000523417 KIAA1551Q9HCM1 1747 aa16.96■□□□□ 0.3
TOP1MT-217ENST00000523417 DALRD3Q5D0E6 543 aaKnown RBP16.95■□□□□ 0.3
TOP1MT-217ENST00000523417 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
TOP1MT-217ENST00000523417 COL15A1P39059 1388 aa16.94■□□□□ 0.3
TOP1MT-217ENST00000523417 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
TOP1MT-217ENST00000523417 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
TOP1MT-217ENST00000523417 PRKAR2BP31323 418 aa16.94■□□□□ 0.3
TOP1MT-217ENST00000523417 KIF3CO14782 793 aa16.93■□□□□ 0.3
TOP1MT-217ENST00000523417 IL6STP40189 918 aaPredicted RBP16.93■□□□□ 0.3
TOP1MT-217ENST00000523417 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
TOP1MT-217ENST00000523417 SERPINB2P05120 415 aa16.92■□□□□ 0.3
TOP1MT-217ENST00000523417 CANXP27824 592 aaKnown RBP16.92■□□□□ 0.3
TOP1MT-217ENST00000523417 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
TOP1MT-217ENST00000523417 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
TOP1MT-217ENST00000523417 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
TOP1MT-217ENST00000523417 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
TOP1MT-217ENST00000523417 CHRNA5P30532 468 aa16.9■□□□□ 0.3
TOP1MT-217ENST00000523417 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
TOP1MT-217ENST00000523417 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
TOP1MT-217ENST00000523417 N4BP2Q86UW6 1770 aaPredicted RBP16.89■□□□□ 0.29
TOP1MT-217ENST00000523417 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
TOP1MT-217ENST00000523417 KCNQ3O43525 872 aa16.88■□□□□ 0.29
TOP1MT-217ENST00000523417 HSPA6P17066 643 aa16.88■□□□□ 0.29
TOP1MT-217ENST00000523417 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
TOP1MT-217ENST00000523417 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
TOP1MT-217ENST00000523417 RGL2O15211 777 aa16.87■□□□□ 0.29
TOP1MT-217ENST00000523417 TOMM70O94826 608 aa16.87■□□□□ 0.29
TOP1MT-217ENST00000523417 A1BGP04217 495 aa16.87■□□□□ 0.29
TOP1MT-217ENST00000523417 BRIP1Q9BX63 1249 aa16.87■□□□□ 0.29
TOP1MT-217ENST00000523417 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
TOP1MT-217ENST00000523417 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
TOP1MT-217ENST00000523417 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
TOP1MT-217ENST00000523417 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
TOP1MT-217ENST00000523417 TTLL6Q8N841 843 aa16.86■□□□□ 0.29
TOP1MT-217ENST00000523417 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
TOP1MT-217ENST00000523417 NRXN2Q9P2S2 1712 aa16.85■□□□□ 0.29
TOP1MT-217ENST00000523417 H0YIN7 160 aa16.85■□□□□ 0.29
TOP1MT-217ENST00000523417 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
TOP1MT-217ENST00000523417 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
TOP1MT-217ENST00000523417 TBC1D2BQ9UPU7 963 aa16.85■□□□□ 0.29
TOP1MT-217ENST00000523417 PDE6BP35913 854 aa16.84■□□□□ 0.29
TOP1MT-217ENST00000523417 MCM10Q7L590 875 aa16.84■□□□□ 0.29
TOP1MT-217ENST00000523417 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
TOP1MT-217ENST00000523417 ZC3H4Q9UPT8 1303 aaKnown RBP16.84■□□□□ 0.29
TOP1MT-217ENST00000523417 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.28
TOP1MT-217ENST00000523417 KCNA4P22459 653 aa16.83■□□□□ 0.28
TOP1MT-217ENST00000523417 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
TOP1MT-217ENST00000523417 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.28
TOP1MT-217ENST00000523417 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
TOP1MT-217ENST00000523417 ARFGEF1Q9Y6D6 1849 aa16.83■□□□□ 0.28
TOP1MT-217ENST00000523417 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
TOP1MT-217ENST00000523417 PRR5LQ6MZQ0 368 aa16.82■□□□□ 0.28
TOP1MT-217ENST00000523417 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
TOP1MT-217ENST00000523417 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 LMNB1P20700 586 aa16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 DZIP3Q86Y13 1208 aaKnown RBP16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 RBM46Q8TBY0 533 aaKnown RBP16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 NMRK2Q9NPI5 230 aa16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
TOP1MT-217ENST00000523417 DCTN1Q14203 1278 aa16.8■□□□□ 0.28
TOP1MT-217ENST00000523417 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
TOP1MT-217ENST00000523417 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
TOP1MT-217ENST00000523417 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
TOP1MT-217ENST00000523417 NBPF26B4DH59 902 aa16.79■□□□□ 0.28
TOP1MT-217ENST00000523417 NEFMP07197 916 aa16.79■□□□□ 0.28
TOP1MT-217ENST00000523417 APLP1P51693 650 aa16.79■□□□□ 0.28
TOP1MT-217ENST00000523417 NBPF10Q6P3W6 841 aaKnown RBP16.79■□□□□ 0.28
TOP1MT-217ENST00000523417 NBPF15Q8N660 670 aa16.79■□□□□ 0.28
TOP1MT-217ENST00000523417 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
TOP1MT-217ENST00000523417 PRELPP51888 382 aa16.78■□□□□ 0.28
TOP1MT-217ENST00000523417 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
TOP1MT-217ENST00000523417 SRGNP10124 158 aa16.77■□□□□ 0.28
TOP1MT-217ENST00000523417 FSTL1Q12841 308 aa16.77■□□□□ 0.28
TOP1MT-217ENST00000523417 NFE2L2Q16236 605 aa16.77■□□□□ 0.28
TOP1MT-217ENST00000523417 STYK1Q6J9G0 422 aa16.77■□□□□ 0.28
TOP1MT-217ENST00000523417 CNBD1Q8NA66 436 aa16.77■□□□□ 0.28
TOP1MT-217ENST00000523417 CNKSR1Q969H4 720 aa16.77■□□□□ 0.28
TOP1MT-217ENST00000523417 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
TOP1MT-217ENST00000523417 GLTPD2A6NH11 291 aa16.76■□□□□ 0.27
TOP1MT-217ENST00000523417 NFKBIEO00221 500 aa16.76■□□□□ 0.27
TOP1MT-217ENST00000523417 RALBP1Q15311 655 aa16.76■□□□□ 0.27
TOP1MT-217ENST00000523417 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
TOP1MT-217ENST00000523417 LTBP3Q9NS15 1303 aa16.75■□□□□ 0.27
TOP1MT-217ENST00000523417 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
TOP1MT-217ENST00000523417 ST5P78524 1137 aa16.75■□□□□ 0.27
TOP1MT-217ENST00000523417 RASSF7Q02833 373 aa16.75■□□□□ 0.27
TOP1MT-217ENST00000523417 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms