RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 DLEC1Q9Y238 1755 aa18.98■□□□□ 0.63
HMBOX1-209ENST00000522468 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
HMBOX1-209ENST00000522468 ZNF526Q8TF50 670 aaPredicted RBP18.97■□□□□ 0.63
HMBOX1-209ENST00000522468 BCL2L12Q9HB09 334 aa18.97■□□□□ 0.63
HMBOX1-209ENST00000522468 U2SURPO15042 1029 aaKnown RBP18.96■□□□□ 0.63
HMBOX1-209ENST00000522468 SBF1O95248 1867 aa18.96■□□□□ 0.63
HMBOX1-209ENST00000522468 GNAT3A8MTJ3 354 aa18.95■□□□□ 0.62
HMBOX1-209ENST00000522468 KIF3CO14782 793 aa18.95■□□□□ 0.62
HMBOX1-209ENST00000522468 ZPR1O75312 459 aa18.95■□□□□ 0.62
HMBOX1-209ENST00000522468 FCHSD2O94868 740 aa18.95■□□□□ 0.62
HMBOX1-209ENST00000522468 GAS2L2Q8NHY3 880 aa18.95■□□□□ 0.62
HMBOX1-209ENST00000522468 PHACTR3Q96KR7 559 aa18.95■□□□□ 0.62
HMBOX1-209ENST00000522468 SCN7AQ01118 1682 aa18.95■□□□□ 0.62
HMBOX1-209ENST00000522468 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
HMBOX1-209ENST00000522468 NFIXQ14938 502 aa18.94■□□□□ 0.62
HMBOX1-209ENST00000522468 ZNF790Q6PG37 636 aa18.94■□□□□ 0.62
HMBOX1-209ENST00000522468 ZNF496Q96IT1 587 aaPredicted RBP18.94■□□□□ 0.62
HMBOX1-209ENST00000522468 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
HMBOX1-209ENST00000522468 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
HMBOX1-209ENST00000522468 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
HMBOX1-209ENST00000522468 CHRNA5P30532 468 aa18.93■□□□□ 0.62
HMBOX1-209ENST00000522468 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
HMBOX1-209ENST00000522468 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
HMBOX1-209ENST00000522468 TTC5Q8N0Z6 440 aa18.92■□□□□ 0.62
HMBOX1-209ENST00000522468 ANKRD31Q8N7Z5 1873 aa18.91■□□□□ 0.62
HMBOX1-209ENST00000522468 PRKAR2BP31323 418 aa18.91■□□□□ 0.62
HMBOX1-209ENST00000522468 TEFQ10587 303 aa18.91■□□□□ 0.62
HMBOX1-209ENST00000522468 DALRD3Q5D0E6 543 aaKnown RBP18.91■□□□□ 0.62
HMBOX1-209ENST00000522468 STARD3NLO95772 234 aa18.9■□□□□ 0.62
HMBOX1-209ENST00000522468 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
HMBOX1-209ENST00000522468 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
HMBOX1-209ENST00000522468 BCORQ6W2J9 1755 aa18.89■□□□□ 0.61
HMBOX1-209ENST00000522468 HSPA6P17066 643 aa18.89■□□□□ 0.61
HMBOX1-209ENST00000522468 CARMIL3Q8ND23 1372 aa18.89■□□□□ 0.61
HMBOX1-209ENST00000522468 SERPINB2P05120 415 aa18.88■□□□□ 0.61
HMBOX1-209ENST00000522468 CFAP53Q96M91 514 aa18.88■□□□□ 0.61
HMBOX1-209ENST00000522468 TEX13AQ9BXU3 409 aaPredicted RBP18.88■□□□□ 0.61
HMBOX1-209ENST00000522468 KCNQ3O43525 872 aa18.87■□□□□ 0.61
HMBOX1-209ENST00000522468 C9orf131Q5VYM1 1079 aa18.87■□□□□ 0.61
HMBOX1-209ENST00000522468 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
HMBOX1-209ENST00000522468 A0A087WZG4 1122 aa18.86■□□□□ 0.61
HMBOX1-209ENST00000522468 IL6STP40189 918 aaPredicted RBP18.86■□□□□ 0.61
HMBOX1-209ENST00000522468 FMNL2Q96PY5 1086 aa18.86■□□□□ 0.61
HMBOX1-209ENST00000522468 NMRK2Q9NPI5 230 aa18.85■□□□□ 0.61
HMBOX1-209ENST00000522468 DLG5Q8TDM6 1919 aa18.84■□□□□ 0.61
HMBOX1-209ENST00000522468 BTBD11A6QL63 1104 aa18.84■□□□□ 0.61
HMBOX1-209ENST00000522468 TBC1D9BQ66K14 1250 aa18.84■□□□□ 0.61
HMBOX1-209ENST00000522468 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
HMBOX1-209ENST00000522468 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
HMBOX1-209ENST00000522468 TNRC6CQ9HCJ0 1690 aaKnown RBP18.83■□□□□ 0.61
HMBOX1-209ENST00000522468 TOMM70O94826 608 aa18.83■□□□□ 0.6
HMBOX1-209ENST00000522468 A1BGP04217 495 aa18.83■□□□□ 0.6
HMBOX1-209ENST00000522468 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.6
HMBOX1-209ENST00000522468 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.6
HMBOX1-209ENST00000522468 PRELPP51888 382 aa18.82■□□□□ 0.6
HMBOX1-209ENST00000522468 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
HMBOX1-209ENST00000522468 CAMTA2O94983 1202 aa18.81■□□□□ 0.6
HMBOX1-209ENST00000522468 BICDL1Q6ZP65 573 aa18.81■□□□□ 0.6
HMBOX1-209ENST00000522468 MCM10Q7L590 875 aa18.81■□□□□ 0.6
HMBOX1-209ENST00000522468 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
HMBOX1-209ENST00000522468 USP16Q9Y5T5 823 aa18.81■□□□□ 0.6
HMBOX1-209ENST00000522468 TIAM2Q8IVF5 1701 aa18.8■□□□□ 0.6
HMBOX1-209ENST00000522468 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
HMBOX1-209ENST00000522468 PRAMEF22A3QJZ6 481 aa18.8■□□□□ 0.6
HMBOX1-209ENST00000522468 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
HMBOX1-209ENST00000522468 PRR5LQ6MZQ0 368 aa18.8■□□□□ 0.6
HMBOX1-209ENST00000522468 C2CD5Q86YS7 1000 aa18.8■□□□□ 0.6
HMBOX1-209ENST00000522468 TTLL6Q8N841 843 aa18.8■□□□□ 0.6
HMBOX1-209ENST00000522468 LAMB4A4D0S4 1761 aa18.79■□□□□ 0.6
HMBOX1-209ENST00000522468 KDM3BQ7LBC6 1761 aa18.79■□□□□ 0.6
HMBOX1-209ENST00000522468 ARFGEF2Q9Y6D5 1785 aa18.79■□□□□ 0.6
HMBOX1-209ENST00000522468 RASSF7Q02833 373 aa18.79■□□□□ 0.6
HMBOX1-209ENST00000522468 DICER1Q9UPY3 1922 aaKnown RBP18.78■□□□□ 0.6
HMBOX1-209ENST00000522468 ZC3H4Q9UPT8 1303 aaKnown RBP18.78■□□□□ 0.6
HMBOX1-209ENST00000522468 H0YIN7 160 aa18.78■□□□□ 0.6
HMBOX1-209ENST00000522468 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
HMBOX1-209ENST00000522468 BRIP1Q9BX63 1249 aa18.78■□□□□ 0.6
HMBOX1-209ENST00000522468 PCNTO95613 3336 aa18.78■□□□□ 0.6
HMBOX1-209ENST00000522468 NFKBIEO00221 500 aa18.77■□□□□ 0.6
HMBOX1-209ENST00000522468 RTF1Q92541 710 aaKnown RBP18.77■□□□□ 0.6
HMBOX1-209ENST00000522468 ZNF330Q9Y3S2 320 aaPredicted RBP18.77■□□□□ 0.6
HMBOX1-209ENST00000522468 WDR90Q96KV7 1748 aa18.77■□□□□ 0.59
HMBOX1-209ENST00000522468 KDM2BQ8NHM5 1336 aa18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 CACNA1SQ13698 1873 aa18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 LMNB1P20700 586 aa18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 PIP4K2AP48426 406 aaPredicted RBP18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 RBM46Q8TBY0 533 aaKnown RBP18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 PDZRN3Q9UPQ7 1066 aa18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 SLX4Q8IY92 1834 aa18.76■□□□□ 0.59
HMBOX1-209ENST00000522468 NBPF26B4DH59 902 aa18.75■□□□□ 0.59
HMBOX1-209ENST00000522468 PDE6BP35913 854 aa18.75■□□□□ 0.59
HMBOX1-209ENST00000522468 ZEB1P37275 1124 aaPredicted RBP18.75■□□□□ 0.59
HMBOX1-209ENST00000522468 NBPF10Q6P3W6 841 aaKnown RBP18.75■□□□□ 0.59
HMBOX1-209ENST00000522468 DZIP3Q86Y13 1208 aaKnown RBP18.75■□□□□ 0.59
HMBOX1-209ENST00000522468 CCDC24Q8N4L8 307 aa18.75■□□□□ 0.59
HMBOX1-209ENST00000522468 NBPF15Q8N660 670 aa18.75■□□□□ 0.59
HMBOX1-209ENST00000522468 APLP1P51693 650 aa18.74■□□□□ 0.59
HMBOX1-209ENST00000522468 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
HMBOX1-209ENST00000522468 DNAJC5GQ8N7S2 189 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms