RNA–Protein interactions for RNA: ENST00000522133.1

IKBKB-222, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 5

Gene IKBKB, Length 576 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-222	ENST00000522133	RC3H1	Q5TC82	1133 aa	Known RBP	12.9	□□□□□ -0.34
IKBKB-222	ENST00000522133	DCAF5	Q96JK2	942 aa		12.9	□□□□□ -0.34
IKBKB-222	ENST00000522133	CCDC87	Q9NVE4	849 aa		12.9	□□□□□ -0.34
IKBKB-222	ENST00000522133	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.9	□□□□□ -0.34
IKBKB-222	ENST00000522133	ITGB4	P16144	1822 aa		12.9	□□□□□ -0.34
IKBKB-222	ENST00000522133		A0A0G2JLW4	131 aa		12.89	□□□□□ -0.35
IKBKB-222	ENST00000522133	NEFL	P07196	543 aa		12.89	□□□□□ -0.35
IKBKB-222	ENST00000522133	AMOT	Q4VCS5	1084 aa		12.89	□□□□□ -0.35
IKBKB-222	ENST00000522133	ARHGAP27	Q6ZUM4	889 aa		12.89	□□□□□ -0.35
IKBKB-222	ENST00000522133	ARHGEF1	Q92888	912 aa	Known RBP	12.89	□□□□□ -0.35
IKBKB-222	ENST00000522133	GTF3C3	Q9Y5Q9	886 aa		12.89	□□□□□ -0.35
IKBKB-222	ENST00000522133	PARP3	Q9Y6F1	533 aa		12.89	□□□□□ -0.35
IKBKB-222	ENST00000522133	RPS6KA4	O75676	772 aa		12.88	□□□□□ -0.35
IKBKB-222	ENST00000522133	RTF1	Q92541	710 aa	Known RBP	12.88	□□□□□ -0.35
IKBKB-222	ENST00000522133	RCAN3	Q9UKA8	241 aa		12.88	□□□□□ -0.35
IKBKB-222	ENST00000522133	PKD1L3	Q7Z443	1732 aa		12.88	□□□□□ -0.35
IKBKB-222	ENST00000522133	UBR3	Q6ZT12	1888 aa		12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	PLEKHG2	Q9H7P9	1386 aa		12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	GNAT3	A8MTJ3	354 aa		12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	KIF3C	O14782	793 aa		12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	HTATSF1	O43719	755 aa	Known RBP	12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	GNAI1	P63096	354 aa		12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	C1orf141	Q5JVX7	400 aa		12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	THUMPD2	Q9BTF0	503 aa	Known RBP	12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	TOGARAM1	Q9Y4F4	1720 aa		12.87	□□□□□ -0.35
IKBKB-222	ENST00000522133	PTCD1	O75127	700 aa	Known RBP	12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	TOMM70	O94826	608 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	GYS1	P13807	737 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	DPEP1	P16444	411 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	APLP1	P51693	650 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	DCTN1	Q14203	1278 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	SLC4A9	Q96Q91	983 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	LAS1L	Q9Y4W2	734 aa	Known RBP	12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	CNTNAP4	Q9C0A0	1308 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	FANCI	Q9NVI1	1328 aa		12.86	□□□□□ -0.35
IKBKB-222	ENST00000522133	MCM10	Q7L590	875 aa		12.85	□□□□□ -0.35
IKBKB-222	ENST00000522133	IFT57	Q9NWB7	429 aa		12.85	□□□□□ -0.35
IKBKB-222	ENST00000522133	PIM2	Q9P1W9	311 aa		12.85	□□□□□ -0.35
IKBKB-222	ENST00000522133	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.84	□□□□□ -0.35
IKBKB-222	ENST00000522133	NFATC2IP	Q8NCF5	419 aa		12.84	□□□□□ -0.35
IKBKB-222	ENST00000522133	TSR2	Q969E8	191 aa	Known RBP	12.84	□□□□□ -0.35
IKBKB-222	ENST00000522133	CFAP44	Q96MT7	982 aa		12.84	□□□□□ -0.35
IKBKB-222	ENST00000522133	PXDNL	A1KZ92	1463 aa		12.84	□□□□□ -0.35
IKBKB-222	ENST00000522133	AKAP4	Q5JQC9	854 aa		12.83	□□□□□ -0.36
IKBKB-222	ENST00000522133	SCN11A	Q9UI33	1791 aa		12.83	□□□□□ -0.36
IKBKB-222	ENST00000522133	CEP350	Q5VT06	3117 aa		12.83	□□□□□ -0.36
IKBKB-222	ENST00000522133	CT47B1	P0C2W7	299 aa	Predicted RBP	12.82	□□□□□ -0.36
IKBKB-222	ENST00000522133	ZNF853	P0CG23	659 aa		12.82	□□□□□ -0.36
IKBKB-222	ENST00000522133	CRKL	P46109	303 aa	Known RBP	12.82	□□□□□ -0.36
IKBKB-222	ENST00000522133	EXOSC9	Q06265	439 aa	Known RBP	12.82	□□□□□ -0.36
IKBKB-222	ENST00000522133	DALRD3	Q5D0E6	543 aa	Known RBP	12.82	□□□□□ -0.36
IKBKB-222	ENST00000522133	ADAMTS7	Q9UKP4	1686 aa		12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	ZPR1	O75312	459 aa		12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	RRP1	P56182	461 aa	Known RBP	12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	FKBP8	Q14318	412 aa		12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	C9orf131	Q5VYM1	1079 aa		12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	NMRK2	Q9NPI5	230 aa		12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	MBIP	Q9NS73	344 aa		12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	RNF123	Q5XPI4	1314 aa		12.81	□□□□□ -0.36
IKBKB-222	ENST00000522133	CIC	Q96RK0	1608 aa	Predicted RBP	12.8	□□□□□ -0.36
IKBKB-222	ENST00000522133	C10orf71	Q711Q0	1435 aa		12.8	□□□□□ -0.36
IKBKB-222	ENST00000522133	SIPA1L3	O60292	1781 aa	Predicted RBP	12.8	□□□□□ -0.36
IKBKB-222	ENST00000522133	IL17RE	Q8NFR9	667 aa		12.8	□□□□□ -0.36
IKBKB-222	ENST00000522133	SRP68	Q9UHB9	627 aa	Known RBP	12.8	□□□□□ -0.36
IKBKB-222	ENST00000522133	KDM2B	Q8NHM5	1336 aa		12.8	□□□□□ -0.36
IKBKB-222	ENST00000522133	KDM3B	Q7LBC6	1761 aa		12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	CHL1	O00533	1208 aa		12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	KCNA3	P22001	575 aa		12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	RBM46	Q8TBY0	533 aa	Known RBP	12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	USP42	Q9H9J4	1324 aa	Known RBP	12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	CEMIP	Q8WUJ3	1361 aa		12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	KDM6A	O15550	1401 aa	Predicted RBP	12.79	□□□□□ -0.36
IKBKB-222	ENST00000522133	RNMT	O43148	476 aa	Known RBP	12.78	□□□□□ -0.36
IKBKB-222	ENST00000522133	IRX6	P78412	446 aa	Predicted RBP	12.78	□□□□□ -0.36
IKBKB-222	ENST00000522133	RNF181	Q9P0P0	153 aa		12.78	□□□□□ -0.36
IKBKB-222	ENST00000522133	TSPYL4	Q9UJ04	414 aa		12.78	□□□□□ -0.36
IKBKB-222	ENST00000522133	CHRNA5	P30532	468 aa		12.77	□□□□□ -0.37
IKBKB-222	ENST00000522133	TEF	Q10587	303 aa		12.77	□□□□□ -0.37
IKBKB-222	ENST00000522133	TAF7	Q15545	349 aa	Predicted RBP	12.77	□□□□□ -0.37
IKBKB-222	ENST00000522133	LGR6	Q9HBX8	967 aa		12.77	□□□□□ -0.37
IKBKB-222	ENST00000522133	BABAM1	Q9NWV8	329 aa		12.77	□□□□□ -0.37
IKBKB-222	ENST00000522133	RARS	P54136	660 aa	Known RBP	12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	DDR1	Q08345	913 aa		12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	FSTL1	Q12841	308 aa		12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	USPL1	Q5W0Q7	1092 aa		12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	INTS5	Q6P9B9	1019 aa	Known RBP	12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	DNAJC5G	Q8N7S2	189 aa		12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	ZNF428	Q96B54	188 aa		12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	SLC52A2	Q9HAB3	445 aa		12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.76	□□□□□ -0.37
IKBKB-222	ENST00000522133	POLRMT	O00411	1230 aa	Known RBP	12.75	□□□□□ -0.37
IKBKB-222	ENST00000522133	BCAR3	O75815	825 aa		12.75	□□□□□ -0.37
IKBKB-222	ENST00000522133	C4A	P0C0L4	1744 aa		12.75	□□□□□ -0.37
IKBKB-222	ENST00000522133	TM4SF1	P30408	202 aa		12.75	□□□□□ -0.37
IKBKB-222	ENST00000522133	TWISTNB	Q3B726	338 aa	Predicted RBP	12.75	□□□□□ -0.37
IKBKB-222	ENST00000522133	ZNF831	Q5JPB2	1677 aa		12.75	□□□□□ -0.37
IKBKB-222	ENST00000522133	DNAJC10	Q8IXB1	793 aa		12.75	□□□□□ -0.37
IKBKB-222	ENST00000522133	RRAGC	Q9HB90	399 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms