RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 ZNF496Q96IT1 587 aaPredicted RBP24.63■■□□□ 1.53
TOP1MT-216ENST00000522121 NARFQ9UHQ1 456 aa24.63■■□□□ 1.53
TOP1MT-216ENST00000522121 BCS1LQ9Y276 419 aa24.63■■□□□ 1.53
TOP1MT-216ENST00000522121 CEMIPQ8WUJ3 1361 aa24.63■■□□□ 1.53
TOP1MT-216ENST00000522121 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
TOP1MT-216ENST00000522121 TM4SF1P30408 202 aa24.62■■□□□ 1.53
TOP1MT-216ENST00000522121 DDR1Q08345 913 aa24.62■■□□□ 1.53
TOP1MT-216ENST00000522121 FMNL2Q96PY5 1086 aa24.62■■□□□ 1.53
TOP1MT-216ENST00000522121 HEG1Q9ULI3 1381 aa24.62■■□□□ 1.53
TOP1MT-216ENST00000522121 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
TOP1MT-216ENST00000522121 C1QTNF8P60827 252 aa24.61■■□□□ 1.53
TOP1MT-216ENST00000522121 UBR2Q8IWV8 1755 aa24.61■■□□□ 1.53
TOP1MT-216ENST00000522121 ATP10DQ9P241 1426 aa24.61■■□□□ 1.53
TOP1MT-216ENST00000522121 POLRMTO00411 1230 aaKnown RBP24.6■■□□□ 1.53
TOP1MT-216ENST00000522121 A0A087WZG4 1122 aa24.59■■□□□ 1.53
TOP1MT-216ENST00000522121 NEFMP07197 916 aa24.59■■□□□ 1.53
TOP1MT-216ENST00000522121 PIM2Q9P1W9 311 aa24.58■■□□□ 1.53
TOP1MT-216ENST00000522121 N4BP2Q86UW6 1770 aaPredicted RBP24.57■■□□□ 1.52
TOP1MT-216ENST00000522121 EIF5P55010 431 aaKnown RBP24.57■■□□□ 1.52
TOP1MT-216ENST00000522121 GPBP1L1Q9HC44 474 aaPredicted RBP24.57■■□□□ 1.52
TOP1MT-216ENST00000522121 KIAA1551Q9HCM1 1747 aa24.57■■□□□ 1.52
TOP1MT-216ENST00000522121 ADCY9O60503 1353 aa24.56■■□□□ 1.52
TOP1MT-216ENST00000522121 HTATSF1O43719 755 aaKnown RBP24.56■■□□□ 1.52
TOP1MT-216ENST00000522121 NFIXQ14938 502 aa24.56■■□□□ 1.52
TOP1MT-216ENST00000522121 MCM10Q7L590 875 aa24.56■■□□□ 1.52
TOP1MT-216ENST00000522121 NPM2Q86SE8 214 aaKnown RBP24.56■■□□□ 1.52
TOP1MT-216ENST00000522121 KCNA3P22001 575 aa24.55■■□□□ 1.52
TOP1MT-216ENST00000522121 ARHGAP27Q6ZUM4 889 aa24.55■■□□□ 1.52
TOP1MT-216ENST00000522121 ZNF330Q9Y3S2 320 aaPredicted RBP24.55■■□□□ 1.52
TOP1MT-216ENST00000522121 SIPA1L3O60292 1781 aaPredicted RBP24.54■■□□□ 1.52
TOP1MT-216ENST00000522121 DALRD3Q5D0E6 543 aaKnown RBP24.54■■□□□ 1.52
TOP1MT-216ENST00000522121 BCL2L12Q9HB09 334 aa24.54■■□□□ 1.52
TOP1MT-216ENST00000522121 KCNQ3O43525 872 aa24.53■■□□□ 1.52
TOP1MT-216ENST00000522121 IL6STP40189 918 aaPredicted RBP24.53■■□□□ 1.52
TOP1MT-216ENST00000522121 SERPINB2P05120 415 aa24.52■■□□□ 1.52
TOP1MT-216ENST00000522121 ZNF526Q8TF50 670 aaPredicted RBP24.52■■□□□ 1.52
TOP1MT-216ENST00000522121 CHRNA5P30532 468 aa24.51■■□□□ 1.51
TOP1MT-216ENST00000522121 SENP3-EIF4A1A0A087X0R7 540 aa24.5■■□□□ 1.51
TOP1MT-216ENST00000522121 A1BGP04217 495 aa24.5■■□□□ 1.51
TOP1MT-216ENST00000522121 DCTN1Q14203 1278 aa24.5■■□□□ 1.51
TOP1MT-216ENST00000522121 BICDL1Q6ZP65 573 aa24.5■■□□□ 1.51
TOP1MT-216ENST00000522121 PNNQ9H307 717 aaKnown RBP24.5■■□□□ 1.51
TOP1MT-216ENST00000522121 SNRPA1P09661 255 aaKnown RBP24.49■■□□□ 1.51
TOP1MT-216ENST00000522121 TBC1D2BQ9UPU7 963 aa24.49■■□□□ 1.51
TOP1MT-216ENST00000522121 TAF7Q15545 349 aaPredicted RBP24.48■■□□□ 1.51
TOP1MT-216ENST00000522121 RALBP1Q15311 655 aa24.47■■□□□ 1.51
TOP1MT-216ENST00000522121 USP16Q9Y5T5 823 aa24.47■■□□□ 1.51
TOP1MT-216ENST00000522121 TBC1D9BQ66K14 1250 aa24.46■■□□□ 1.51
TOP1MT-216ENST00000522121 BRCA1P38398 1863 aaKnown RBP24.45■■□□□ 1.51
TOP1MT-216ENST00000522121 PLEKHF1Q96S99 279 aa24.45■■□□□ 1.5
TOP1MT-216ENST00000522121 MAPK8IP3Q9UPT6 1336 aa24.44■■□□□ 1.5
TOP1MT-216ENST00000522121 DZIP3Q86Y13 1208 aaKnown RBP24.44■■□□□ 1.5
TOP1MT-216ENST00000522121 PNISRQ8TF01 805 aaKnown RBP24.44■■□□□ 1.5
TOP1MT-216ENST00000522121 PRAMEF22A3QJZ6 481 aa24.43■■□□□ 1.5
TOP1MT-216ENST00000522121 NFE2L2Q16236 605 aa24.43■■□□□ 1.5
TOP1MT-216ENST00000522121 NRXN2Q9P2S2 1712 aa24.43■■□□□ 1.5
TOP1MT-216ENST00000522121 CARMIL3Q8ND23 1372 aa24.42■■□□□ 1.5
TOP1MT-216ENST00000522121 H0YIN7 160 aa24.42■■□□□ 1.5
TOP1MT-216ENST00000522121 CAMTA2O94983 1202 aa24.42■■□□□ 1.5
TOP1MT-216ENST00000522121 C2CD5Q86YS7 1000 aa24.42■■□□□ 1.5
TOP1MT-216ENST00000522121 SETDB2Q96T68 719 aa24.42■■□□□ 1.5
TOP1MT-216ENST00000522121 AFDNP55196 1824 aaKnown RBP24.41■■□□□ 1.5
TOP1MT-216ENST00000522121 ARFGEF1Q9Y6D6 1849 aa24.41■■□□□ 1.5
TOP1MT-216ENST00000522121 NPHP1O15259 732 aa24.41■■□□□ 1.5
TOP1MT-216ENST00000522121 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
TOP1MT-216ENST00000522121 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
TOP1MT-216ENST00000522121 MIS18AQ9NYP9 233 aa24.41■■□□□ 1.5
TOP1MT-216ENST00000522121 SCN7AQ01118 1682 aa24.4■■□□□ 1.5
TOP1MT-216ENST00000522121 PIP4K2AP48426 406 aaPredicted RBP24.4■■□□□ 1.5
TOP1MT-216ENST00000522121 TTLL6Q8N841 843 aa24.4■■□□□ 1.5
TOP1MT-216ENST00000522121 PDZRN3Q9UPQ7 1066 aa24.4■■□□□ 1.5
TOP1MT-216ENST00000522121 PDE6BP35913 854 aa24.39■■□□□ 1.49
TOP1MT-216ENST00000522121 BRIP1Q9BX63 1249 aa24.39■■□□□ 1.49
TOP1MT-216ENST00000522121 ZNF652Q9Y2D9 606 aa24.39■■□□□ 1.49
TOP1MT-216ENST00000522121 CLEC4GQ6UXB4 293 aa24.38■■□□□ 1.49
TOP1MT-216ENST00000522121 PRR5LQ6MZQ0 368 aa24.37■■□□□ 1.49
TOP1MT-216ENST00000522121 CNBD1Q8NA66 436 aa24.37■■□□□ 1.49
TOP1MT-216ENST00000522121 RNF181Q9P0P0 153 aa24.37■■□□□ 1.49
TOP1MT-216ENST00000522121 ST5P78524 1137 aa24.36■■□□□ 1.49
TOP1MT-216ENST00000522121 KIF3CO14782 793 aa24.35■■□□□ 1.49
TOP1MT-216ENST00000522121 ZNF622Q969S3 477 aaKnown RBP eCLIP24.35■■□□□ 1.497e-7■□□□□ 8.8
TOP1MT-216ENST00000522121 MYBBP1AQ9BQG0 1328 aaKnown RBP24.35■■□□□ 1.49
TOP1MT-216ENST00000522121 NBPF26B4DH59 902 aa24.34■■□□□ 1.49
TOP1MT-216ENST00000522121 NBPF10Q6P3W6 841 aaKnown RBP24.34■■□□□ 1.49
TOP1MT-216ENST00000522121 CCDC24Q8N4L8 307 aa24.34■■□□□ 1.49
TOP1MT-216ENST00000522121 NBPF15Q8N660 670 aa24.34■■□□□ 1.49
TOP1MT-216ENST00000522121 THUMPD2Q9BTF0 503 aaKnown RBP24.34■■□□□ 1.49
TOP1MT-216ENST00000522121 RGL2O15211 777 aa24.33■■□□□ 1.49
TOP1MT-216ENST00000522121 EIF4A1P60842 406 aaKnown RBP24.32■■□□□ 1.48
TOP1MT-216ENST00000522121 NBPF5PQ86XG9 351 aaPredicted RBP24.32■■□□□ 1.48
TOP1MT-216ENST00000522121 RIPK4P57078 832 aa24.31■■□□□ 1.48
TOP1MT-216ENST00000522121 DLG5Q8TDM6 1919 aa24.31■■□□□ 1.48
TOP1MT-216ENST00000522121 DLEC1Q9Y238 1755 aa24.31■■□□□ 1.48
TOP1MT-216ENST00000522121 KDM2BQ8NHM5 1336 aa24.31■■□□□ 1.48
TOP1MT-216ENST00000522121 BCORQ6W2J9 1755 aa24.3■■□□□ 1.48
TOP1MT-216ENST00000522121 LMNB1P20700 586 aa24.3■■□□□ 1.48
TOP1MT-216ENST00000522121 RASSF7Q02833 373 aa24.3■■□□□ 1.48
TOP1MT-216ENST00000522121 LMOD3Q0VAK6 560 aa24.3■■□□□ 1.48
TOP1MT-216ENST00000522121 NMRK2Q9NPI5 230 aa24.29■■□□□ 1.48
TOP1MT-216ENST00000522121 NIP7Q9Y221 180 aaKnown RBP eCLIP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms