RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 LINC00116Q8NCU8 138 aa31.14■■■□□ 2.57
PVT1-212ENST00000521951 STARD3NLO95772 234 aa31.13■■■□□ 2.57
PVT1-212ENST00000521951 COL5A3P25940 1745 aaPredicted RBP31.13■■■□□ 2.57
PVT1-212ENST00000521951 HDGFL1Q5TGJ6 251 aa31.13■■■□□ 2.57
PVT1-212ENST00000521951 NECTIN2Q92692 538 aa31.13■■■□□ 2.57
PVT1-212ENST00000521951 A1BGP04217 495 aa31.08■■■□□ 2.57
PVT1-212ENST00000521951 CCDC30Q5VVM6 783 aa31.08■■■□□ 2.57
PVT1-212ENST00000521951 CHMP4AQ9BY43 222 aa31.08■■■□□ 2.57
PVT1-212ENST00000521951 MYH14Q7Z406 1995 aaKnown RBP31.08■■■□□ 2.57
PVT1-212ENST00000521951 TCERG1O14776 1098 aaKnown RBP31.08■■■□□ 2.57
PVT1-212ENST00000521951 ZNF428Q96B54 188 aa31.08■■■□□ 2.57
PVT1-212ENST00000521951 CRKLP46109 303 aaKnown RBP31.07■■■□□ 2.56
PVT1-212ENST00000521951 RREB1Q92766 1687 aa31.06■■■□□ 2.56
PVT1-212ENST00000521951 INTS5Q6P9B9 1019 aaKnown RBP31.06■■■□□ 2.56
PVT1-212ENST00000521951 HMGB2P26583 209 aaKnown RBP31.05■■■□□ 2.56
PVT1-212ENST00000521951 RC3H1Q5TC82 1133 aaKnown RBP31.05■■■□□ 2.56
PVT1-212ENST00000521951 CCDC87Q9NVE4 849 aa31.05■■■□□ 2.56
PVT1-212ENST00000521951 C4BP0C0L5 1744 aa31.05■■■□□ 2.56
PVT1-212ENST00000521951 CNTNAP4Q9C0A0 1308 aa31.05■■■□□ 2.56
PVT1-212ENST00000521951 PIP4K2AP48426 406 aaPredicted RBP31.04■■■□□ 2.56
PVT1-212ENST00000521951 PDIA6Q15084 440 aa31.04■■■□□ 2.56
PVT1-212ENST00000521951 CHPF2Q9P2E5 772 aa31.04■■■□□ 2.56
PVT1-212ENST00000521951 ERBB4Q15303 1308 aa31.04■■■□□ 2.56
PVT1-212ENST00000521951 NBPF26B4DH59 902 aa31.03■■■□□ 2.56
PVT1-212ENST00000521951 RARSP54136 660 aaKnown RBP31.03■■■□□ 2.56
PVT1-212ENST00000521951 NBPF14Q5TI25 921 aa31.03■■■□□ 2.56
PVT1-212ENST00000521951 NBPF10Q6P3W6 841 aaKnown RBP31.03■■■□□ 2.56
PVT1-212ENST00000521951 NBPF15Q8N660 670 aa31.03■■■□□ 2.56
PVT1-212ENST00000521951 SSH1Q8WYL5 1049 aa31.03■■■□□ 2.56
PVT1-212ENST00000521951 STK31Q9BXU1 1019 aa31.03■■■□□ 2.56
PVT1-212ENST00000521951 DBF4Q9UBU7 674 aaPredicted RBP31.03■■■□□ 2.56
PVT1-212ENST00000521951 ZBTB1Q9Y2K1 713 aa31.03■■■□□ 2.56
PVT1-212ENST00000521951 ANXA1P04083 346 aa31.02■■■□□ 2.56
PVT1-212ENST00000521951 CANXP27824 592 aaKnown RBP31.02■■■□□ 2.56
PVT1-212ENST00000521951 ALDH1L2Q3SY69 923 aa31.02■■■□□ 2.56
PVT1-212ENST00000521951 DDX21Q9NR30 783 aaKnown RBP eCLIP31.02■■■□□ 2.56
PVT1-212ENST00000521951 CACNA1FO60840 1977 aa31.01■■■□□ 2.56
PVT1-212ENST00000521951 PROSER3Q2NL68 480 aa31.01■■■□□ 2.55
PVT1-212ENST00000521951 NUP188Q5SRE5 1749 aa31.01■■■□□ 2.55
PVT1-212ENST00000521951 SLC4A2P04920 1241 aa30.99■■■□□ 2.55
PVT1-212ENST00000521951 MYL6BP14649 208 aa30.99■■■□□ 2.55
PVT1-212ENST00000521951 BCL2L13Q9BXK5 485 aa30.99■■■□□ 2.55
PVT1-212ENST00000521951 RCAN3Q9UKA8 241 aa30.99■■■□□ 2.55
PVT1-212ENST00000521951 MRPL50Q8N5N7 158 aaKnown RBP30.98■■■□□ 2.55
PVT1-212ENST00000521951 AK7Q96M32 723 aa30.98■■■□□ 2.55
PVT1-212ENST00000521951 SMC4Q9NTJ3 1288 aa30.98■■■□□ 2.55
PVT1-212ENST00000521951 LRP10Q7Z4F1 713 aa30.97■■■□□ 2.55
PVT1-212ENST00000521951 AKT1S1Q96B36 256 aa30.97■■■□□ 2.55
PVT1-212ENST00000521951 HYPKQ9NX55 129 aa30.97■■■□□ 2.55
PVT1-212ENST00000521951 GNPATO15228 680 aa30.96■■■□□ 2.55
PVT1-212ENST00000521951 RPS6KA4O75676 772 aa30.96■■■□□ 2.55
PVT1-212ENST00000521951 BCAR3O75815 825 aa30.96■■■□□ 2.55
PVT1-212ENST00000521951 IL6STP40189 918 aaPredicted RBP30.96■■■□□ 2.55
PVT1-212ENST00000521951 ZNF827Q17R98 1081 aa30.96■■■□□ 2.55
PVT1-212ENST00000521951 EIF5P55010 431 aaKnown RBP30.94■■■□□ 2.54
PVT1-212ENST00000521951 PHAXQ9H814 394 aaKnown RBP30.94■■■□□ 2.54
PVT1-212ENST00000521951 UBR3Q6ZT12 1888 aa30.94■■■□□ 2.54
PVT1-212ENST00000521951 G2E3Q7L622 706 aa30.93■■■□□ 2.54
PVT1-212ENST00000521951 RTCBQ9Y3I0 505 aaKnown RBP30.93■■■□□ 2.54
PVT1-212ENST00000521951 SMIM5Q71RC9 77 aa30.93■■■□□ 2.54
PVT1-212ENST00000521951 AMIGO3Q86WK7 504 aa30.93■■■□□ 2.54
PVT1-212ENST00000521951 ANO8Q9HCE9 1232 aaPredicted RBP30.93■■■□□ 2.54
PVT1-212ENST00000521951 ZNF330Q9Y3S2 320 aaPredicted RBP30.93■■■□□ 2.54
PVT1-212ENST00000521951 BRPF1P55201 1214 aaPredicted RBP30.92■■■□□ 2.54
PVT1-212ENST00000521951 CENPBP07199 599 aaPredicted RBP30.9■■■□□ 2.54
PVT1-212ENST00000521951 SLC15A2Q16348 729 aa30.9■■■□□ 2.54
PVT1-212ENST00000521951 COPS6Q7L5N1 327 aa30.9■■■□□ 2.54
PVT1-212ENST00000521951 XAGE3Q8WTP9 111 aa30.9■■■□□ 2.54
PVT1-212ENST00000521951 STK32BQ9NY57 414 aa30.9■■■□□ 2.54
PVT1-212ENST00000521951 TFCP2L1Q9NZI6 479 aa30.9■■■□□ 2.54
PVT1-212ENST00000521951 AIMP1Q12904 312 aaKnown RBP30.89■■■□□ 2.54
PVT1-212ENST00000521951 COL15A1P39059 1388 aa30.89■■■□□ 2.53
PVT1-212ENST00000521951 FLIIQ13045 1269 aa30.88■■■□□ 2.53
PVT1-212ENST00000521951 NPM2Q86SE8 214 aaKnown RBP30.88■■■□□ 2.53
PVT1-212ENST00000521951 TUBGCP6Q96RT7 1819 aa30.88■■■□□ 2.53
PVT1-212ENST00000521951 PHF14O94880 888 aa30.87■■■□□ 2.53
PVT1-212ENST00000521951 TTLL7Q6ZT98 887 aa30.87■■■□□ 2.53
PVT1-212ENST00000521951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.86■■■□□ 2.53
PVT1-212ENST00000521951 SSFA2P28290 1259 aa30.86■■■□□ 2.53
PVT1-212ENST00000521951 TRAPPC3LQ5T215 181 aa30.86■■■□□ 2.53
PVT1-212ENST00000521951 NOB1Q9ULX3 412 aaKnown RBP30.86■■■□□ 2.53
PVT1-212ENST00000521951 A0A087WZG4 1122 aa30.85■■■□□ 2.53
PVT1-212ENST00000521951 ARHGEF1Q92888 912 aaKnown RBP30.85■■■□□ 2.53
PVT1-212ENST00000521951 ARXQ96QS3 562 aa30.85■■■□□ 2.53
PVT1-212ENST00000521951 ADRA2BP18089 450 aa30.84■■■□□ 2.53
PVT1-212ENST00000521951 TBC1D2BQ9UPU7 963 aa30.84■■■□□ 2.53
PVT1-212ENST00000521951 KIF16BQ96L93 1317 aa30.84■■■□□ 2.53
PVT1-212ENST00000521951 DZIP3Q86Y13 1208 aaKnown RBP30.83■■■□□ 2.53
PVT1-212ENST00000521951 FKBP5Q13451 457 aaPredicted RBP30.83■■■□□ 2.53
PVT1-212ENST00000521951 FRAT1Q92837 279 aaPredicted RBP30.83■■■□□ 2.53
PVT1-212ENST00000521951 PTPRCP08575 1304 aa30.81■■■□□ 2.52
PVT1-212ENST00000521951 QSER1Q2KHR3 1735 aa30.81■■■□□ 2.52
PVT1-212ENST00000521951 SOCS7O14512 581 aa30.81■■■□□ 2.52
PVT1-212ENST00000521951 KIF6Q6ZMV9 814 aa30.81■■■□□ 2.52
PVT1-212ENST00000521951 ANKRD13DQ6ZTN6 518 aa30.81■■■□□ 2.52
PVT1-212ENST00000521951 FLAD1Q8NFF5 587 aa30.81■■■□□ 2.52
PVT1-212ENST00000521951 C4AP0C0L4 1744 aa30.81■■■□□ 2.52
PVT1-212ENST00000521951 PNPLA7Q6ZV29 1317 aa30.8■■■□□ 2.52
PVT1-212ENST00000521951 DDX58O95786 925 aaKnown RBP30.8■■■□□ 2.52
PVT1-212ENST00000521951 RFC4P35249 363 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms