RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 KIF13BQ9NQT8 1826 aa22.66■■□□□ 1.22
SQLE-205ENST00000521232 KCNQ3O43525 872 aa22.65■■□□□ 1.22
SQLE-205ENST00000521232 ZPR1O75312 459 aa22.65■■□□□ 1.22
SQLE-205ENST00000521232 NEFMP07197 916 aa22.65■■□□□ 1.22
SQLE-205ENST00000521232 PNNQ9H307 717 aaKnown RBP22.65■■□□□ 1.22
SQLE-205ENST00000521232 DCTN1Q14203 1278 aa22.64■■□□□ 1.21
SQLE-205ENST00000521232 NARFQ9UHQ1 456 aa22.64■■□□□ 1.21
SQLE-205ENST00000521232 CANXP27824 592 aaKnown RBP22.63■■□□□ 1.21
SQLE-205ENST00000521232 TM4SF1P30408 202 aa22.63■■□□□ 1.21
SQLE-205ENST00000521232 EIF5P55010 431 aaKnown RBP22.63■■□□□ 1.21
SQLE-205ENST00000521232 TGFB2P61812 414 aa22.63■■□□□ 1.21
SQLE-205ENST00000521232 USPL1Q5W0Q7 1092 aa22.63■■□□□ 1.21
SQLE-205ENST00000521232 COL15A1P39059 1388 aa22.63■■□□□ 1.21
SQLE-205ENST00000521232 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
SQLE-205ENST00000521232 DLG5Q8TDM6 1919 aa22.61■■□□□ 1.21
SQLE-205ENST00000521232 TAF7Q15545 349 aaPredicted RBP22.61■■□□□ 1.21
SQLE-205ENST00000521232 C10orf71Q711Q0 1435 aa22.61■■□□□ 1.21
SQLE-205ENST00000521232 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
SQLE-205ENST00000521232 DDR1Q08345 913 aa22.6■■□□□ 1.21
SQLE-205ENST00000521232 NFE2L2Q16236 605 aa22.6■■□□□ 1.21
SQLE-205ENST00000521232 A0A087WZG4 1122 aa22.59■■□□□ 1.21
SQLE-205ENST00000521232 ZNF784Q8NCA9 323 aaPredicted RBP22.59■■□□□ 1.21
SQLE-205ENST00000521232 KIAA1551Q9HCM1 1747 aa22.58■■□□□ 1.21
SQLE-205ENST00000521232 POLRMTO00411 1230 aaKnown RBP22.58■■□□□ 1.21
SQLE-205ENST00000521232 IL6STP40189 918 aaPredicted RBP22.58■■□□□ 1.21
SQLE-205ENST00000521232 BCL2L12Q9HB09 334 aa22.58■■□□□ 1.21
SQLE-205ENST00000521232 PXDNLA1KZ92 1463 aa22.58■■□□□ 1.2
SQLE-205ENST00000521232 A0A0G2JLW4 131 aa22.57■■□□□ 1.2
SQLE-205ENST00000521232 A1BGP04217 495 aa22.57■■□□□ 1.2
SQLE-205ENST00000521232 SNRPA1P09661 255 aaKnown RBP22.57■■□□□ 1.2
SQLE-205ENST00000521232 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
SQLE-205ENST00000521232 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
SQLE-205ENST00000521232 N4BP2Q86UW6 1770 aaPredicted RBP22.56■■□□□ 1.2
SQLE-205ENST00000521232 NFIXQ14938 502 aa22.55■■□□□ 1.2
SQLE-205ENST00000521232 PNISRQ8TF01 805 aaKnown RBP22.55■■□□□ 1.2
SQLE-205ENST00000521232 WWC3Q9ULE0 1092 aa22.55■■□□□ 1.2
SQLE-205ENST00000521232 PRAMEF22A3QJZ6 481 aa22.54■■□□□ 1.2
SQLE-205ENST00000521232 DPEP1P16444 411 aa22.54■■□□□ 1.2
SQLE-205ENST00000521232 PRKRIP1Q9H875 184 aaPredicted RBP22.54■■□□□ 1.2
SQLE-205ENST00000521232 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
SQLE-205ENST00000521232 KCNA3P22001 575 aa22.53■■□□□ 1.2
SQLE-205ENST00000521232 TBC1D2BQ9UPU7 963 aa22.52■■□□□ 1.2
SQLE-205ENST00000521232 NPM2Q86SE8 214 aaKnown RBP22.51■■□□□ 1.19
SQLE-205ENST00000521232 AFDNP55196 1824 aaKnown RBP22.51■■□□□ 1.19
SQLE-205ENST00000521232 BRCA1P38398 1863 aaKnown RBP22.5■■□□□ 1.19
SQLE-205ENST00000521232 SERPINB2P05120 415 aa22.5■■□□□ 1.19
SQLE-205ENST00000521232 RIPK4P57078 832 aa22.5■■□□□ 1.19
SQLE-205ENST00000521232 THUMPD2Q9BTF0 503 aaKnown RBP22.5■■□□□ 1.19
SQLE-205ENST00000521232 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
SQLE-205ENST00000521232 NRXN2Q9P2S2 1712 aa22.49■■□□□ 1.19
SQLE-205ENST00000521232 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
SQLE-205ENST00000521232 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
SQLE-205ENST00000521232 KDM3BQ7LBC6 1761 aa22.48■■□□□ 1.19
SQLE-205ENST00000521232 CAMTA2O94983 1202 aa22.48■■□□□ 1.19
SQLE-205ENST00000521232 TBC1D9BQ66K14 1250 aa22.48■■□□□ 1.19
SQLE-205ENST00000521232 PIM2Q9P1W9 311 aa22.48■■□□□ 1.19
SQLE-205ENST00000521232 PIP4K2AP48426 406 aaPredicted RBP22.47■■□□□ 1.19
SQLE-205ENST00000521232 EIF4A1P60842 406 aaKnown RBP22.47■■□□□ 1.19
SQLE-205ENST00000521232 DZIP3Q86Y13 1208 aaKnown RBP22.47■■□□□ 1.19
SQLE-205ENST00000521232 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
SQLE-205ENST00000521232 GIGYF1O75420 1035 aaPredicted RBP22.46■■□□□ 1.19
SQLE-205ENST00000521232 WDR43Q15061 677 aaKnown RBP eCLIP22.46■■□□□ 1.19
SQLE-205ENST00000521232 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
SQLE-205ENST00000521232 BICDL1Q6ZP65 573 aa22.46■■□□□ 1.19
SQLE-205ENST00000521232 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
SQLE-205ENST00000521232 ADAMTS8Q9UP79 889 aa22.46■■□□□ 1.19
SQLE-205ENST00000521232 SCN7AQ01118 1682 aa22.46■■□□□ 1.19
SQLE-205ENST00000521232 CHRNA5P30532 468 aa22.45■■□□□ 1.18
SQLE-205ENST00000521232 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
SQLE-205ENST00000521232 LMOD3Q0VAK6 560 aa22.44■■□□□ 1.18
SQLE-205ENST00000521232 CLEC4GQ6UXB4 293 aa22.44■■□□□ 1.18
SQLE-205ENST00000521232 CCDC146Q8IYE0 955 aa22.44■■□□□ 1.18
SQLE-205ENST00000521232 BABAM1Q9NWV8 329 aa22.44■■□□□ 1.18
SQLE-205ENST00000521232 DALRD3Q5D0E6 543 aaKnown RBP22.43■■□□□ 1.18
SQLE-205ENST00000521232 ARFGEF1Q9Y6D6 1849 aa22.43■■□□□ 1.18
SQLE-205ENST00000521232 RGL2O15211 777 aa22.42■■□□□ 1.18
SQLE-205ENST00000521232 SETDB2Q96T68 719 aa22.42■■□□□ 1.18
SQLE-205ENST00000521232 ADCY9O60503 1353 aa22.41■■□□□ 1.18
SQLE-205ENST00000521232 CARMIL3Q8ND23 1372 aa22.41■■□□□ 1.18
SQLE-205ENST00000521232 LAMB4A4D0S4 1761 aa22.41■■□□□ 1.18
SQLE-205ENST00000521232 BCORQ6W2J9 1755 aa22.41■■□□□ 1.18
SQLE-205ENST00000521232 ARHGAP27Q6ZUM4 889 aa22.41■■□□□ 1.18
SQLE-205ENST00000521232 TSPYL4Q9UJ04 414 aa22.41■■□□□ 1.18
SQLE-205ENST00000521232 RRP7AQ9Y3A4 280 aaKnown RBP22.41■■□□□ 1.18
SQLE-205ENST00000521232 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
SQLE-205ENST00000521232 PRR5LQ6MZQ0 368 aa22.39■■□□□ 1.17
SQLE-205ENST00000521232 BRIP1Q9BX63 1249 aa22.39■■□□□ 1.17
SQLE-205ENST00000521232 TRIM35Q9UPQ4 493 aa22.39■■□□□ 1.17
SQLE-205ENST00000521232 ZNF652Q9Y2D9 606 aa22.39■■□□□ 1.17
SQLE-205ENST00000521232 ATP10DQ9P241 1426 aa22.39■■□□□ 1.17
SQLE-205ENST00000521232 H0YIN7 160 aa22.38■■□□□ 1.17
SQLE-205ENST00000521232 PDZRN3Q9UPQ7 1066 aa22.38■■□□□ 1.17
SQLE-205ENST00000521232 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
SQLE-205ENST00000521232 C2CD5Q86YS7 1000 aa22.37■■□□□ 1.17
SQLE-205ENST00000521232 DLEC1Q9Y238 1755 aa22.36■■□□□ 1.17
SQLE-205ENST00000521232 PDE6BP35913 854 aa22.36■■□□□ 1.17
SQLE-205ENST00000521232 ANKRD31Q8N7Z5 1873 aa22.36■■□□□ 1.17
SQLE-205ENST00000521232 CHL1O00533 1208 aa22.35■■□□□ 1.17
SQLE-205ENST00000521232 TTLL6Q8N841 843 aa22.35■■□□□ 1.17
SQLE-205ENST00000521232 CNBD1Q8NA66 436 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms