RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 A0A0G2JLW4 131 aa23.95■■□□□ 1.42
VEGFA-222ENST00000520948 RPS6KA4O75676 772 aa23.95■■□□□ 1.42
VEGFA-222ENST00000520948 GYS1P13807 737 aa23.95■■□□□ 1.42
VEGFA-222ENST00000520948 ADRA2BP18089 450 aa23.95■■□□□ 1.42
VEGFA-222ENST00000520948 CEMIPQ8WUJ3 1361 aa23.94■■□□□ 1.42
VEGFA-222ENST00000520948 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
VEGFA-222ENST00000520948 NFATC2IPQ8NCF5 419 aa23.94■■□□□ 1.42
VEGFA-222ENST00000520948 BCS1LQ9Y276 419 aa23.94■■□□□ 1.42
VEGFA-222ENST00000520948 BRCA1P38398 1863 aaKnown RBP23.93■■□□□ 1.42
VEGFA-222ENST00000520948 MRC1P22897 1456 aa23.93■■□□□ 1.42
VEGFA-222ENST00000520948 TGFB2P61812 414 aa23.92■■□□□ 1.42
VEGFA-222ENST00000520948 SLC52A2Q9HAB3 445 aa23.92■■□□□ 1.42
VEGFA-222ENST00000520948 CCDC87Q9NVE4 849 aa23.92■■□□□ 1.42
VEGFA-222ENST00000520948 DPEP1P16444 411 aa23.91■■□□□ 1.42
VEGFA-222ENST00000520948 CRKLP46109 303 aaKnown RBP23.91■■□□□ 1.42
VEGFA-222ENST00000520948 SRP68Q9UHB9 627 aaKnown RBP23.91■■□□□ 1.42
VEGFA-222ENST00000520948 PARP3Q9Y6F1 533 aa23.91■■□□□ 1.42
VEGFA-222ENST00000520948 CEP350Q5VT06 3117 aa23.9■■□□□ 1.42
VEGFA-222ENST00000520948 RIPK4P57078 832 aa23.9■■□□□ 1.42
VEGFA-222ENST00000520948 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
VEGFA-222ENST00000520948 SIPA1L3O60292 1781 aaPredicted RBP23.89■■□□□ 1.42
VEGFA-222ENST00000520948 APAF1O14727 1248 aa23.89■■□□□ 1.41
VEGFA-222ENST00000520948 DCTN1Q14203 1278 aa23.88■■□□□ 1.41
VEGFA-222ENST00000520948 MCM10Q7L590 875 aa23.88■■□□□ 1.41
VEGFA-222ENST00000520948 RTF1Q92541 710 aaKnown RBP23.88■■□□□ 1.41
VEGFA-222ENST00000520948 ARHGAP27Q6ZUM4 889 aa23.87■■□□□ 1.41
VEGFA-222ENST00000520948 TRIM35Q9UPQ4 493 aa23.87■■□□□ 1.41
VEGFA-222ENST00000520948 RRP7AQ9Y3A4 280 aaKnown RBP23.87■■□□□ 1.41
VEGFA-222ENST00000520948 KIF3CO14782 793 aa23.86■■□□□ 1.41
VEGFA-222ENST00000520948 HSPA6P17066 643 aa23.86■■□□□ 1.41
VEGFA-222ENST00000520948 FKBP8Q14318 412 aa23.86■■□□□ 1.41
VEGFA-222ENST00000520948 USP42Q9H9J4 1324 aaKnown RBP23.85■■□□□ 1.41
VEGFA-222ENST00000520948 ARFGEF1Q9Y6D6 1849 aa23.85■■□□□ 1.41
VEGFA-222ENST00000520948 DDR1Q08345 913 aa23.84■■□□□ 1.41
VEGFA-222ENST00000520948 TEFQ10587 303 aa23.84■■□□□ 1.41
VEGFA-222ENST00000520948 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
VEGFA-222ENST00000520948 NCBP3Q53F19 620 aaKnown RBP23.84■■□□□ 1.41
VEGFA-222ENST00000520948 INTS5Q6P9B9 1019 aaKnown RBP23.84■■□□□ 1.41
VEGFA-222ENST00000520948 DNAJC10Q8IXB1 793 aa23.83■■□□□ 1.41
VEGFA-222ENST00000520948 KCNA3P22001 575 aa23.82■■□□□ 1.4
VEGFA-222ENST00000520948 LMOD3Q0VAK6 560 aa23.82■■□□□ 1.4
VEGFA-222ENST00000520948 SLC39A6Q13433 755 aa23.81■■□□□ 1.4
VEGFA-222ENST00000520948 THUMPD2Q9BTF0 503 aaKnown RBP23.81■■□□□ 1.4
VEGFA-222ENST00000520948 TAF7Q15545 349 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-222ENST00000520948 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
VEGFA-222ENST00000520948 PIM2Q9P1W9 311 aa23.79■■□□□ 1.4
VEGFA-222ENST00000520948 CHRNA5P30532 468 aa23.78■■□□□ 1.4
VEGFA-222ENST00000520948 CCDC27Q2M243 656 aa23.78■■□□□ 1.4
VEGFA-222ENST00000520948 SOS1Q07889 1333 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-222ENST00000520948 AFDNP55196 1824 aaKnown RBP23.77■■□□□ 1.4
VEGFA-222ENST00000520948 POLRMTO00411 1230 aaKnown RBP23.77■■□□□ 1.4
VEGFA-222ENST00000520948 USPL1Q5W0Q7 1092 aa23.77■■□□□ 1.4
VEGFA-222ENST00000520948 NMRK2Q9NPI5 230 aa23.77■■□□□ 1.4
VEGFA-222ENST00000520948 UBR2Q8IWV8 1755 aa23.77■■□□□ 1.4
VEGFA-222ENST00000520948 BTBD11A6QL63 1104 aa23.76■■□□□ 1.39
VEGFA-222ENST00000520948 ZPR1O75312 459 aa23.76■■□□□ 1.39
VEGFA-222ENST00000520948 DALRD3Q5D0E6 543 aaKnown RBP23.76■■□□□ 1.39
VEGFA-222ENST00000520948 C9orf131Q5VYM1 1079 aa23.76■■□□□ 1.39
VEGFA-222ENST00000520948 ZNF790Q6PG37 636 aa23.76■■□□□ 1.39
VEGFA-222ENST00000520948 CYP19A1P11511 503 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-222ENST00000520948 KCNQ3O43525 872 aa23.74■■□□□ 1.39
VEGFA-222ENST00000520948 TM4SF1P30408 202 aa23.74■■□□□ 1.39
VEGFA-222ENST00000520948 NGEFQ8N5V2 710 aa23.74■■□□□ 1.39
VEGFA-222ENST00000520948 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
VEGFA-222ENST00000520948 COL15A1P39059 1388 aa23.74■■□□□ 1.39
VEGFA-222ENST00000520948 WWC1Q8IX03 1113 aa23.73■■□□□ 1.39
VEGFA-222ENST00000520948 BABAM1Q9NWV8 329 aa23.73■■□□□ 1.39
VEGFA-222ENST00000520948 KDM3BQ7LBC6 1761 aa23.73■■□□□ 1.39
VEGFA-222ENST00000520948 TOMM70O94826 608 aa23.72■■□□□ 1.39
VEGFA-222ENST00000520948 MIS18AQ9NYP9 233 aa23.72■■□□□ 1.39
VEGFA-222ENST00000520948 SBF1O95248 1867 aa23.71■■□□□ 1.39
VEGFA-222ENST00000520948 NRXN2Q9P2S2 1712 aa23.71■■□□□ 1.39
VEGFA-222ENST00000520948 CHL1O00533 1208 aa23.71■■□□□ 1.39
VEGFA-222ENST00000520948 NFIXQ14938 502 aa23.71■■□□□ 1.39
VEGFA-222ENST00000520948 ZNF496Q96IT1 587 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-222ENST00000520948 ZNF853P0CG23 659 aa23.7■■□□□ 1.38
VEGFA-222ENST00000520948 IFFO2Q5TF58 517 aa23.7■■□□□ 1.38
VEGFA-222ENST00000520948 TTC5Q8N0Z6 440 aa23.7■■□□□ 1.38
VEGFA-222ENST00000520948 VSIG10Q8N0Z9 540 aa23.7■■□□□ 1.38
VEGFA-222ENST00000520948 RNF181Q9P0P0 153 aa23.7■■□□□ 1.38
VEGFA-222ENST00000520948 NARFQ9UHQ1 456 aa23.7■■□□□ 1.38
VEGFA-222ENST00000520948 CANXP27824 592 aaKnown RBP23.69■■□□□ 1.38
VEGFA-222ENST00000520948 DLEC1Q9Y238 1755 aa23.69■■□□□ 1.38
VEGFA-222ENST00000520948 CFAP44Q96MT7 982 aa23.68■■□□□ 1.38
VEGFA-222ENST00000520948 BCL2L12Q9HB09 334 aa23.68■■□□□ 1.38
VEGFA-222ENST00000520948 HEG1Q9ULI3 1381 aa23.67■■□□□ 1.38
VEGFA-222ENST00000520948 APLP1P51693 650 aa23.67■■□□□ 1.38
VEGFA-222ENST00000520948 EIF4A1P60842 406 aaKnown RBP23.66■■□□□ 1.38
VEGFA-222ENST00000520948 CALD1Q05682 793 aaKnown RBP23.66■■□□□ 1.38
VEGFA-222ENST00000520948 FMNL2Q96PY5 1086 aa23.66■■□□□ 1.38
VEGFA-222ENST00000520948 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-222ENST00000520948 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
VEGFA-222ENST00000520948 WDR90Q96KV7 1748 aa23.65■■□□□ 1.38
VEGFA-222ENST00000520948 TNRC6CQ9HCJ0 1690 aaKnown RBP23.65■■□□□ 1.38
VEGFA-222ENST00000520948 SERPINB2P05120 415 aa23.65■■□□□ 1.38
VEGFA-222ENST00000520948 RASSF7Q02833 373 aa23.65■■□□□ 1.38
VEGFA-222ENST00000520948 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
VEGFA-222ENST00000520948 C16orf71Q8IYS4 520 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-222ENST00000520948 IFT57Q9NWB7 429 aa23.65■■□□□ 1.38
VEGFA-222ENST00000520948 TSPYL4Q9UJ04 414 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms