RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 SLC39A6Q13433 755 aa9.73□□□□□ -0.85
TRAPPC9-207ENST00000520532 CCDC27Q2M243 656 aa9.73□□□□□ -0.85
TRAPPC9-207ENST00000520532 COL23A1Q86Y22 540 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-207ENST00000520532 PDGFDQ9GZP0 370 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-207ENST00000520532 USP42Q9H9J4 1324 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-207ENST00000520532 C10orf71Q711Q0 1435 aa9.73□□□□□ -0.85
TRAPPC9-207ENST00000520532 CACNA1FO60840 1977 aa9.72□□□□□ -0.85
TRAPPC9-207ENST00000520532 ZBTB7AO95365 584 aa9.72□□□□□ -0.85
TRAPPC9-207ENST00000520532 SNRPA1P09661 255 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-207ENST00000520532 IL6STP40189 918 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-207ENST00000520532 DNAJC10Q8IXB1 793 aa9.72□□□□□ -0.85
TRAPPC9-207ENST00000520532 PPP1R1BQ9UD71 204 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-207ENST00000520532 ARFGEF2Q9Y6D5 1785 aa9.72□□□□□ -0.85
TRAPPC9-207ENST00000520532 NUP98P52948 1817 aa9.71□□□□□ -0.85
TRAPPC9-207ENST00000520532 ARFGEF1Q9Y6D6 1849 aa9.71□□□□□ -0.85
TRAPPC9-207ENST00000520532 A0A087WZG4 1122 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 CCER2I3L3R5 266 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 HOXB7P09629 217 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 DCTN1Q14203 1278 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 TRAPPC3LQ5T215 181 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 INTS5Q6P9B9 1019 aaKnown RBP9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 AMIGO3Q86WK7 504 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 CCDC146Q8IYE0 955 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 TRIM35Q9UPQ4 493 aa9.71□□□□□ -0.86
TRAPPC9-207ENST00000520532 PHF14O94880 888 aa9.7□□□□□ -0.86
TRAPPC9-207ENST00000520532 RFC4P35249 363 aa9.7□□□□□ -0.86
TRAPPC9-207ENST00000520532 NLGN1Q8N2Q7 840 aa9.7□□□□□ -0.86
TRAPPC9-207ENST00000520532 ARXQ96QS3 562 aa9.7□□□□□ -0.86
TRAPPC9-207ENST00000520532 TSPYL4Q9UJ04 414 aa9.7□□□□□ -0.86
TRAPPC9-207ENST00000520532 ZBTB1Q9Y2K1 713 aa9.7□□□□□ -0.86
TRAPPC9-207ENST00000520532 LAMB2P55268 1798 aa9.7□□□□□ -0.86
TRAPPC9-207ENST00000520532 CHL1O00533 1208 aa9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 GYS1P13807 737 aa9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 EIF4A1P60842 406 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 IL16Q14005 1332 aa9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 CHD4Q14839 1912 aa9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 ARHGEF1Q92888 912 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 IFT57Q9NWB7 429 aa9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 NARFQ9UHQ1 456 aa9.69□□□□□ -0.86
TRAPPC9-207ENST00000520532 ANKRD31Q8N7Z5 1873 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 COL11A2P13942 1736 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 UTRNP46939 3433 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 ATP10DQ9P241 1426 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 IBTKQ9P2D0 1353 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 APAF1O14727 1248 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 MSH5O43196 834 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 GNAI1P63096 354 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 CCDC184Q52MB2 194 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 CHMP4AQ9BY43 222 aa9.68□□□□□ -0.86
TRAPPC9-207ENST00000520532 CARMIL3Q8ND23 1372 aa9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 KCNQ3O43525 872 aa9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 ZNF853P0CG23 659 aa9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 NPM2Q86SE8 214 aaKnown RBP9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 ATF5Q9Y2D1 282 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 RRP7AQ9Y3A4 280 aaKnown RBP9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 CD2APQ9Y5K6 639 aa9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 N4BP2Q86UW6 1770 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC9-207ENST00000520532 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
TRAPPC9-207ENST00000520532 RIC1Q4ADV7 1423 aa9.66□□□□□ -0.86
TRAPPC9-207ENST00000520532 ZPR1O75312 459 aa9.66□□□□□ -0.86
TRAPPC9-207ENST00000520532 NEUROD2Q15784 382 aa9.66□□□□□ -0.86
TRAPPC9-207ENST00000520532 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC9-207ENST00000520532 ZNF652Q9Y2D9 606 aa9.66□□□□□ -0.86
TRAPPC9-207ENST00000520532 MMP10P09238 476 aa9.65□□□□□ -0.86
TRAPPC9-207ENST00000520532 CLEC4GQ6UXB4 293 aa9.65□□□□□ -0.86
TRAPPC9-207ENST00000520532 SYT17Q9BSW7 474 aa9.65□□□□□ -0.86
TRAPPC9-207ENST00000520532 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-207ENST00000520532 MSL1Q68DK7 614 aa9.64□□□□□ -0.87
TRAPPC9-207ENST00000520532 WDR63Q8IWG1 891 aa9.64□□□□□ -0.87
TRAPPC9-207ENST00000520532 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
TRAPPC9-207ENST00000520532 MBIPQ9NS73 344 aa9.64□□□□□ -0.87
TRAPPC9-207ENST00000520532 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
TRAPPC9-207ENST00000520532 PRAMEF22A3QJZ6 481 aa9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 ERVV-1B6SEH8 477 aa9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 A1BGP04217 495 aa9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 USPL1Q5W0Q7 1092 aa9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 MIS18AQ9NYP9 233 aa9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 PARP3Q9Y6F1 533 aa9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 TNRC6CQ9HCJ0 1690 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-207ENST00000520532 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 ZNF521Q96K83 1311 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 CACNA1SQ13698 1873 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 DCAF8L1A6NGE4 600 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 POLRMTO00411 1230 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 CAMTA2O94983 1202 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 TM4SF1P30408 202 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 FKBP8Q14318 412 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 DIEXFQ68CQ4 756 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 SRP68Q9UHB9 627 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-207ENST00000520532 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 832.2 ms