RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 TWISTNBQ3B726 338 aaPredicted RBP22.15■■□□□ 1.14
TSNARE1-202ENST00000518720 TRMT2AQ8IZ69 625 aaKnown RBP22.15■■□□□ 1.14
TSNARE1-202ENST00000518720 NECTIN2Q92692 538 aa22.15■■□□□ 1.14
TSNARE1-202ENST00000518720 TEX13AQ9BXU3 409 aaPredicted RBP22.15■■□□□ 1.14
TSNARE1-202ENST00000518720 USP16Q9Y5T5 823 aa22.15■■□□□ 1.14
TSNARE1-202ENST00000518720 STARD3NLO95772 234 aa22.14■■□□□ 1.13
TSNARE1-202ENST00000518720 AK7Q96M32 723 aa22.14■■□□□ 1.13
TSNARE1-202ENST00000518720 HOXB7P09629 217 aa22.13■■□□□ 1.13
TSNARE1-202ENST00000518720 CYP19A1P11511 503 aaPredicted RBP22.13■■□□□ 1.13
TSNARE1-202ENST00000518720 CRKLP46109 303 aaKnown RBP22.13■■□□□ 1.13
TSNARE1-202ENST00000518720 HDGFL1Q5TGJ6 251 aa22.13■■□□□ 1.13
TSNARE1-202ENST00000518720 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
TSNARE1-202ENST00000518720 ANO8Q9HCE9 1232 aaPredicted RBP22.12■■□□□ 1.13
TSNARE1-202ENST00000518720 CCDC87Q9NVE4 849 aa22.12■■□□□ 1.13
TSNARE1-202ENST00000518720 PIP4K2AP48426 406 aaPredicted RBP22.11■■□□□ 1.13
TSNARE1-202ENST00000518720 ZNF827Q17R98 1081 aa22.11■■□□□ 1.13
TSNARE1-202ENST00000518720 ZBTB1Q9Y2K1 713 aa22.11■■□□□ 1.13
TSNARE1-202ENST00000518720 QSER1Q2KHR3 1735 aa22.11■■□□□ 1.13
TSNARE1-202ENST00000518720 GNPATO15228 680 aa22.1■■□□□ 1.13
TSNARE1-202ENST00000518720 A1BGP04217 495 aa22.1■■□□□ 1.13
TSNARE1-202ENST00000518720 C4AP0C0L4 1744 aa22.1■■□□□ 1.13
TSNARE1-202ENST00000518720 HMGB2P26583 209 aaKnown RBP22.1■■□□□ 1.13
TSNARE1-202ENST00000518720 STK32BQ9NY57 414 aa22.1■■□□□ 1.13
TSNARE1-202ENST00000518720 ZNF330Q9Y3S2 320 aaPredicted RBP22.1■■□□□ 1.13
TSNARE1-202ENST00000518720 SOS1Q07889 1333 aaPredicted RBP22.09■■□□□ 1.13
TSNARE1-202ENST00000518720 CACNA1FO60840 1977 aa22.09■■□□□ 1.13
TSNARE1-202ENST00000518720 CANXP27824 592 aaKnown RBP22.09■■□□□ 1.13
TSNARE1-202ENST00000518720 TCERG1O14776 1098 aaKnown RBP22.08■■□□□ 1.13
TSNARE1-202ENST00000518720 INTS5Q6P9B9 1019 aaKnown RBP22.08■■□□□ 1.13
TSNARE1-202ENST00000518720 AKT1S1Q96B36 256 aa22.08■■□□□ 1.13
TSNARE1-202ENST00000518720 VAMP4O75379 141 aa22.07■■□□□ 1.12
TSNARE1-202ENST00000518720 PHF14O94880 888 aa22.07■■□□□ 1.12
TSNARE1-202ENST00000518720 RC3H1Q5TC82 1133 aaKnown RBP22.07■■□□□ 1.12
TSNARE1-202ENST00000518720 NBPF14Q5TI25 921 aa22.07■■□□□ 1.12
TSNARE1-202ENST00000518720 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
TSNARE1-202ENST00000518720 CHPF2Q9P2E5 772 aa22.07■■□□□ 1.12
TSNARE1-202ENST00000518720 ANXA1P04083 346 aa22.06■■□□□ 1.12
TSNARE1-202ENST00000518720 MYL6BP14649 208 aa22.06■■□□□ 1.12
TSNARE1-202ENST00000518720 CCDC30Q5VVM6 783 aa22.06■■□□□ 1.12
TSNARE1-202ENST00000518720 SMIM5Q71RC9 77 aa22.06■■□□□ 1.12
TSNARE1-202ENST00000518720 ERBB4Q15303 1308 aa22.06■■□□□ 1.12
TSNARE1-202ENST00000518720 SLC15A2Q16348 729 aa22.05■■□□□ 1.12
TSNARE1-202ENST00000518720 PROSER3Q2NL68 480 aa22.05■■□□□ 1.12
TSNARE1-202ENST00000518720 RTCBQ9Y3I0 505 aaKnown RBP22.05■■□□□ 1.12
TSNARE1-202ENST00000518720 COL15A1P39059 1388 aa22.04■■□□□ 1.12
TSNARE1-202ENST00000518720 NBPF26B4DH59 902 aa22.04■■□□□ 1.12
TSNARE1-202ENST00000518720 NBPF10Q6P3W6 841 aaKnown RBP22.04■■□□□ 1.12
TSNARE1-202ENST00000518720 NBPF15Q8N660 670 aa22.04■■□□□ 1.12
TSNARE1-202ENST00000518720 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
TSNARE1-202ENST00000518720 RPS6KA4O75676 772 aa22.03■■□□□ 1.12
TSNARE1-202ENST00000518720 AMIGO3Q86WK7 504 aa22.03■■□□□ 1.12
TSNARE1-202ENST00000518720 CHMP4AQ9BY43 222 aa22.03■■□□□ 1.12
TSNARE1-202ENST00000518720 BCORQ6W2J9 1755 aa22.02■■□□□ 1.12
TSNARE1-202ENST00000518720 SCN7AQ01118 1682 aa22.02■■□□□ 1.12
TSNARE1-202ENST00000518720 CT47B1P0C2W7 299 aaPredicted RBP22.02■■□□□ 1.12
TSNARE1-202ENST00000518720 NPM2Q86SE8 214 aaKnown RBP22.02■■□□□ 1.12
TSNARE1-202ENST00000518720 DDX21Q9NR30 783 aaKnown RBP eCLIP22.02■■□□□ 1.12
TSNARE1-202ENST00000518720 DBF4Q9UBU7 674 aaPredicted RBP22.02■■□□□ 1.12
TSNARE1-202ENST00000518720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.01■■□□□ 1.11
TSNARE1-202ENST00000518720 SSFA2P28290 1259 aa22.01■■□□□ 1.11
TSNARE1-202ENST00000518720 IL6STP40189 918 aaPredicted RBP22.01■■□□□ 1.11
TSNARE1-202ENST00000518720 ARXQ96QS3 562 aa22.01■■□□□ 1.11
TSNARE1-202ENST00000518720 BCL2L13Q9BXK5 485 aa22.01■■□□□ 1.11
TSNARE1-202ENST00000518720 MSH5O43196 834 aa22■■□□□ 1.11
TSNARE1-202ENST00000518720 PDIA6Q15084 440 aa22■■□□□ 1.11
TSNARE1-202ENST00000518720 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
TSNARE1-202ENST00000518720 EIF5P55010 431 aaKnown RBP21.99■■□□□ 1.11
TSNARE1-202ENST00000518720 R3HDM1Q15032 1099 aaKnown RBP21.99■■□□□ 1.11
TSNARE1-202ENST00000518720 SMC4Q9NTJ3 1288 aa21.99■■□□□ 1.11
TSNARE1-202ENST00000518720 CASZ1Q86V15 1759 aa21.99■■□□□ 1.11
TSNARE1-202ENST00000518720 ARFGEF2Q9Y6D5 1785 aa21.98■■□□□ 1.11
TSNARE1-202ENST00000518720 PSDA5PKW4 1024 aaPredicted RBP21.98■■□□□ 1.11
TSNARE1-202ENST00000518720 TRAPPC3LQ5T215 181 aa21.98■■□□□ 1.11
TSNARE1-202ENST00000518720 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
TSNARE1-202ENST00000518720 HYPKQ9NX55 129 aa21.98■■□□□ 1.11
TSNARE1-202ENST00000518720 SLC4A2P04920 1241 aa21.97■■□□□ 1.11
TSNARE1-202ENST00000518720 ADRA2BP18089 450 aa21.97■■□□□ 1.11
TSNARE1-202ENST00000518720 AIMP1Q12904 312 aaKnown RBP21.97■■□□□ 1.11
TSNARE1-202ENST00000518720 XAGE3Q8WTP9 111 aa21.97■■□□□ 1.11
TSNARE1-202ENST00000518720 ZNF428Q96B54 188 aa21.97■■□□□ 1.11
TSNARE1-202ENST00000518720 A0A087WZG4 1122 aa21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 RFC4P35249 363 aa21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 LRP10Q7Z4F1 713 aa21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 COL23A1Q86Y22 540 aaPredicted RBP21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 ARHGEF1Q92888 912 aaKnown RBP21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 PHAXQ9H814 394 aaKnown RBP21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 NUP98P52948 1817 aa21.96■■□□□ 1.11
TSNARE1-202ENST00000518720 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
TSNARE1-202ENST00000518720 ALDH1L2Q3SY69 923 aa21.95■■□□□ 1.1
TSNARE1-202ENST00000518720 KIF6Q6ZMV9 814 aa21.95■■□□□ 1.1
TSNARE1-202ENST00000518720 TTLL7Q6ZT98 887 aa21.95■■□□□ 1.1
TSNARE1-202ENST00000518720 FLAD1Q8NFF5 587 aa21.95■■□□□ 1.1
TSNARE1-202ENST00000518720 TBC1D2BQ9UPU7 963 aa21.95■■□□□ 1.1
TSNARE1-202ENST00000518720 COPS6Q7L5N1 327 aa21.94■■□□□ 1.1
TSNARE1-202ENST00000518720 G2E3Q7L622 706 aa21.94■■□□□ 1.1
TSNARE1-202ENST00000518720 MRPL50Q8N5N7 158 aaKnown RBP21.94■■□□□ 1.1
TSNARE1-202ENST00000518720 SRP68Q9UHB9 627 aaKnown RBP21.94■■□□□ 1.1
TSNARE1-202ENST00000518720 ANKRD36CQ5JPF3 1778 aa21.94■■□□□ 1.1
TSNARE1-202ENST00000518720 ZPR1O75312 459 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms