RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 LGR5O75473 907 aa8.13□□□□□ -1.11
SQLE-202ENST00000518604 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
SQLE-202ENST00000518604 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
SQLE-202ENST00000518604 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
SQLE-202ENST00000518604 PURBQ96QR8 312 aaKnown RBP8.13□□□□□ -1.11
SQLE-202ENST00000518604 SOS2Q07890 1332 aaPredicted RBP8.12□□□□□ -1.11
SQLE-202ENST00000518604 NOS2P35228 1153 aa8.12□□□□□ -1.11
SQLE-202ENST00000518604 LYSMD3Q7Z3D4 306 aa8.12□□□□□ -1.11
SQLE-202ENST00000518604 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
SQLE-202ENST00000518604 CHMP7Q8WUX9 453 aaPredicted RBP8.12□□□□□ -1.11
SQLE-202ENST00000518604 ZNF775Q96BV0 537 aaPredicted RBP8.12□□□□□ -1.11
SQLE-202ENST00000518604 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
SQLE-202ENST00000518604 CABP1Q9NZU7 370 aa8.12□□□□□ -1.11
SQLE-202ENST00000518604 BMP1P13497 986 aa8.11□□□□□ -1.11
SQLE-202ENST00000518604 TBCELQ5QJ74 424 aa8.11□□□□□ -1.11
SQLE-202ENST00000518604 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
SQLE-202ENST00000518604 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
SQLE-202ENST00000518604 IVNS1ABPQ9Y6Y0 642 aa8.11□□□□□ -1.11
SQLE-202ENST00000518604 EML1O00423 815 aa8.1□□□□□ -1.11
SQLE-202ENST00000518604 C1orf53Q5VUE5 145 aa8.1□□□□□ -1.11
SQLE-202ENST00000518604 L3MBTL2Q969R5 705 aa8.1□□□□□ -1.11
SQLE-202ENST00000518604 SENP2Q9HC62 589 aa8.1□□□□□ -1.11
SQLE-202ENST00000518604 EGFL7Q9UHF1 273 aa8.1□□□□□ -1.11
SQLE-202ENST00000518604 C4orf17Q53FE4 359 aa8.09□□□□□ -1.11
SQLE-202ENST00000518604 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
SQLE-202ENST00000518604 ZDHHC1Q8WTX9 485 aa8.09□□□□□ -1.11
SQLE-202ENST00000518604 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
SQLE-202ENST00000518604 ZNF232Q9UNY5 417 aa8.09□□□□□ -1.11
SQLE-202ENST00000518604 ST8SIA5O15466 376 aa8.08□□□□□ -1.12
SQLE-202ENST00000518604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.08□□□□□ -1.12
SQLE-202ENST00000518604 PRICKLE2Q7Z3G6 844 aa8.08□□□□□ -1.12
SQLE-202ENST00000518604 MYO19Q96H55 970 aa8.08□□□□□ -1.12
SQLE-202ENST00000518604 ZDHHC3Q9NYG2 299 aa8.08□□□□□ -1.12
SQLE-202ENST00000518604 POU4F2Q12837 409 aa8.07□□□□□ -1.12
SQLE-202ENST00000518604 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
SQLE-202ENST00000518604 NBPF1Q3BBV0 1214 aa8.07□□□□□ -1.12
SQLE-202ENST00000518604 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
SQLE-202ENST00000518604 GPC6Q9Y625 555 aaPredicted RBP8.07□□□□□ -1.12
SQLE-202ENST00000518604 FIGNL2A6NMB9 653 aa8.06□□□□□ -1.12
SQLE-202ENST00000518604 PLA2G4AP47712 749 aa8.06□□□□□ -1.12
SQLE-202ENST00000518604 C16orf46Q6P387 395 aa8.06□□□□□ -1.12
SQLE-202ENST00000518604 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
SQLE-202ENST00000518604 GTF3C2Q8WUA4 911 aaPredicted RBP8.06□□□□□ -1.12
SQLE-202ENST00000518604 GZF1Q9H116 711 aaPredicted RBP8.06□□□□□ -1.12
SQLE-202ENST00000518604 SEPT3Q9UH03 358 aa8.06□□□□□ -1.12
SQLE-202ENST00000518604 A0A1B0GTH6 734 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 MAN1A2O60476 641 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 FKBP4Q02790 459 aaKnown RBP eCLIP8.05□□□□□ -1.12
SQLE-202ENST00000518604 HIF1AQ16665 826 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 RTN1Q16799 776 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 HELQQ8TDG4 1101 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 DNMT3LQ9UJW3 386 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 HCN4Q9Y3Q4 1203 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 PARP3Q9Y6F1 533 aa8.05□□□□□ -1.12
SQLE-202ENST00000518604 ICMTO60725 284 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 TATP17735 454 aaPredicted RBP8.04□□□□□ -1.12
SQLE-202ENST00000518604 SCNN1AP37088 669 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 SERPINB4P48594 390 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 NAA30Q147X3 362 aaPredicted RBP8.04□□□□□ -1.12
SQLE-202ENST00000518604 CAPN12Q6ZSI9 719 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 AIDAQ96BJ3 306 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 PHACTR1Q9C0D0 580 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 QTRT2Q9H974 415 aaKnown RBP8.04□□□□□ -1.12
SQLE-202ENST00000518604 DACH1Q9UI36 760 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 DYRK1BQ9Y463 629 aa8.04□□□□□ -1.12
SQLE-202ENST00000518604 SOWAHDA6NJG2 315 aa8.03□□□□□ -1.12
SQLE-202ENST00000518604 ABL1P00519 1130 aa8.03□□□□□ -1.12
SQLE-202ENST00000518604 PHKA2P46019 1235 aa8.03□□□□□ -1.12
SQLE-202ENST00000518604 COX20Q5RI15 118 aa8.03□□□□□ -1.12
SQLE-202ENST00000518604 SH3PXD2AQ5TCZ1 1133 aa8.03□□□□□ -1.12
SQLE-202ENST00000518604 SND1Q7KZF4 910 aaKnown RBP eCLIP8.03□□□□□ -1.12
SQLE-202ENST00000518604 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
SQLE-202ENST00000518604 RHOQP17081 205 aa8.02□□□□□ -1.13
SQLE-202ENST00000518604 NPR3P17342 541 aa8.02□□□□□ -1.13
SQLE-202ENST00000518604 C11orf91Q3C1V1 193 aa8.02□□□□□ -1.13
SQLE-202ENST00000518604 NGLY1Q96IV0 654 aa8.02□□□□□ -1.13
SQLE-202ENST00000518604 DNMT3AQ9Y6K1 912 aaPredicted RBP8.02□□□□□ -1.13
SQLE-202ENST00000518604 FAM13AO94988 1023 aa8.01□□□□□ -1.13
SQLE-202ENST00000518604 BRD2P25440 801 aaKnown RBP8.01□□□□□ -1.13
SQLE-202ENST00000518604 TXLNAP40222 546 aa8.01□□□□□ -1.13
SQLE-202ENST00000518604 C7orf43Q8WVR3 580 aa8.01□□□□□ -1.13
SQLE-202ENST00000518604 SAP130Q9H0E3 1048 aa8.01□□□□□ -1.13
SQLE-202ENST00000518604 STIM2Q9P246 746 aa8.01□□□□□ -1.13
SQLE-202ENST00000518604 ANKIB1Q9P2G1 1089 aa8.01□□□□□ -1.13
SQLE-202ENST00000518604 F11P03951 625 aa8□□□□□ -1.13
SQLE-202ENST00000518604 MSX1P28360 303 aa8□□□□□ -1.13
SQLE-202ENST00000518604 TMCO4Q5TGY1 634 aa8□□□□□ -1.13
SQLE-202ENST00000518604 GLYCTKQ8IVS8 523 aa8□□□□□ -1.13
SQLE-202ENST00000518604 ABTB2Q8N961 1025 aa8□□□□□ -1.13
SQLE-202ENST00000518604 RHPN1Q8TCX5 695 aa8□□□□□ -1.13
SQLE-202ENST00000518604 PODXL2Q9NZ53 605 aa8□□□□□ -1.13
SQLE-202ENST00000518604 LRFN2Q9ULH4 789 aa8□□□□□ -1.13
SQLE-202ENST00000518604 ATP4AP20648 1035 aa7.99□□□□□ -1.13
SQLE-202ENST00000518604 ZNF211Q13398 564 aaPredicted RBP7.99□□□□□ -1.13
SQLE-202ENST00000518604 LBRQ14739 615 aaKnown RBP7.99□□□□□ -1.13
SQLE-202ENST00000518604 ALKBH2Q6NS38 261 aa7.99□□□□□ -1.13
SQLE-202ENST00000518604 BICDL1Q6ZP65 573 aa7.99□□□□□ -1.13
SQLE-202ENST00000518604 CRISPLD1Q9H336 500 aa7.99□□□□□ -1.13
SQLE-202ENST00000518604 GMPR2Q9P2T1 348 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms