RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 USPL1Q5W0Q7 1092 aa15.72■□□□□ 0.11
TRAPPC9-203ENST00000517667 INTS5Q6P9B9 1019 aaKnown RBP15.72■□□□□ 0.11
TRAPPC9-203ENST00000517667 SOS1Q07889 1333 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC9-203ENST00000517667 COL15A1P39059 1388 aa15.71■□□□□ 0.11
TRAPPC9-203ENST00000517667 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
TRAPPC9-203ENST00000517667 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
TRAPPC9-203ENST00000517667 NARFQ9UHQ1 456 aa15.7■□□□□ 0.1
TRAPPC9-203ENST00000517667 MRC1P22897 1456 aa15.7■□□□□ 0.1
TRAPPC9-203ENST00000517667 DICER1Q9UPY3 1922 aaKnown RBP15.7■□□□□ 0.1
TRAPPC9-203ENST00000517667 HSPA1AP0DMV8 641 aaKnown RBP15.69■□□□□ 0.1
TRAPPC9-203ENST00000517667 HSPA1BP0DMV9 641 aaKnown RBP15.69■□□□□ 0.1
TRAPPC9-203ENST00000517667 POLR3GLQ9BT43 218 aa15.69■□□□□ 0.1
TRAPPC9-203ENST00000517667 NFIXQ14938 502 aa15.68■□□□□ 0.1
TRAPPC9-203ENST00000517667 AKAP4Q5JQC9 854 aa15.68■□□□□ 0.1
TRAPPC9-203ENST00000517667 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
TRAPPC9-203ENST00000517667 DNAJC10Q8IXB1 793 aa15.68■□□□□ 0.1
TRAPPC9-203ENST00000517667 SLC52A2Q9HAB3 445 aa15.68■□□□□ 0.1
TRAPPC9-203ENST00000517667 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
TRAPPC9-203ENST00000517667 UBR2Q8IWV8 1755 aa15.67■□□□□ 0.1
TRAPPC9-203ENST00000517667 DPY19L2Q6NUT2 758 aa15.67■□□□□ 0.1
TRAPPC9-203ENST00000517667 FER1L6Q2WGJ9 1857 aa15.66■□□□□ 0.1
TRAPPC9-203ENST00000517667 H0YIN7 160 aa15.66■□□□□ 0.1
TRAPPC9-203ENST00000517667 SERPINB2P05120 415 aa15.66■□□□□ 0.1
TRAPPC9-203ENST00000517667 CYP19A1P11511 503 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC9-203ENST00000517667 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
TRAPPC9-203ENST00000517667 PDZRN3Q9UPQ7 1066 aa15.66■□□□□ 0.1
TRAPPC9-203ENST00000517667 SCN7AQ01118 1682 aa15.65■□□□□ 0.1
TRAPPC9-203ENST00000517667 MORC1Q86VD1 984 aa15.65■□□□□ 0.1
TRAPPC9-203ENST00000517667 VSIG10Q8N0Z9 540 aa15.65■□□□□ 0.1
TRAPPC9-203ENST00000517667 ANKRD31Q8N7Z5 1873 aa15.65■□□□□ 0.1
TRAPPC9-203ENST00000517667 NFKBIEO00221 500 aa15.64■□□□□ 0.09
TRAPPC9-203ENST00000517667 PANK3Q9H999 370 aa15.64■□□□□ 0.09
TRAPPC9-203ENST00000517667 ZBTB1Q9Y2K1 713 aa15.64■□□□□ 0.09
TRAPPC9-203ENST00000517667 COL11A2P13942 1736 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC9-203ENST00000517667 IL13P35225 146 aa15.63■□□□□ 0.09
TRAPPC9-203ENST00000517667 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
TRAPPC9-203ENST00000517667 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
TRAPPC9-203ENST00000517667 CARMIL3Q8ND23 1372 aa15.62■□□□□ 0.09
TRAPPC9-203ENST00000517667 ARFGEF2Q9Y6D5 1785 aa15.62■□□□□ 0.09
TRAPPC9-203ENST00000517667 POTECB2RU33 542 aa15.62■□□□□ 0.09
TRAPPC9-203ENST00000517667 A0A087WZG4 1122 aa15.61■□□□□ 0.09
TRAPPC9-203ENST00000517667 RNMTO43148 476 aaKnown RBP15.61■□□□□ 0.09
TRAPPC9-203ENST00000517667 PDE6BP35913 854 aa15.61■□□□□ 0.09
TRAPPC9-203ENST00000517667 SLC39A6Q13433 755 aa15.61■□□□□ 0.09
TRAPPC9-203ENST00000517667 ERFEQ4G0M1 354 aa15.61■□□□□ 0.09
TRAPPC9-203ENST00000517667 LGR6Q9HBX8 967 aa15.61■□□□□ 0.09
TRAPPC9-203ENST00000517667 CACNA1SQ13698 1873 aa15.61■□□□□ 0.09
TRAPPC9-203ENST00000517667 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
TRAPPC9-203ENST00000517667 LTBP3Q9NS15 1303 aa15.6■□□□□ 0.09
TRAPPC9-203ENST00000517667 SCN4AP35499 1836 aa15.59■□□□□ 0.09
TRAPPC9-203ENST00000517667 STARD3NLO95772 234 aa15.59■□□□□ 0.09
TRAPPC9-203ENST00000517667 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
TRAPPC9-203ENST00000517667 TTC5Q8N0Z6 440 aa15.59■□□□□ 0.09
TRAPPC9-203ENST00000517667 ZNF622Q969S3 477 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRAPPC9-203ENST00000517667 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
TRAPPC9-203ENST00000517667 EIF5P55010 431 aaKnown RBP15.58■□□□□ 0.08
TRAPPC9-203ENST00000517667 BICDL1Q6ZP65 573 aa15.58■□□□□ 0.08
TRAPPC9-203ENST00000517667 TAOK3Q9H2K8 898 aa15.58■□□□□ 0.08
TRAPPC9-203ENST00000517667 KNSTRNQ9Y448 316 aa15.58■□□□□ 0.08
TRAPPC9-203ENST00000517667 C21orf2O43822 256 aa15.57■□□□□ 0.08
TRAPPC9-203ENST00000517667 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.083e-7■■■■■ 75
TRAPPC9-203ENST00000517667 SOGA3Q5TF21 947 aa15.57■□□□□ 0.08
TRAPPC9-203ENST00000517667 IQCA1LA6NCM1 817 aa15.56■□□□□ 0.08
TRAPPC9-203ENST00000517667 MKRN1Q9UHC7 482 aaKnown RBP15.56■□□□□ 0.08
TRAPPC9-203ENST00000517667 CNTNAP1P78357 1384 aa15.56■□□□□ 0.08
TRAPPC9-203ENST00000517667 SIPA1L3O60292 1781 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-203ENST00000517667 BCORQ6W2J9 1755 aa15.56■□□□□ 0.08
TRAPPC9-203ENST00000517667 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
TRAPPC9-203ENST00000517667 PRR5LQ6MZQ0 368 aa15.55■□□□□ 0.08
TRAPPC9-203ENST00000517667 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
TRAPPC9-203ENST00000517667 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-203ENST00000517667 ZNF219Q9P2Y4 722 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-203ENST00000517667 SLX4Q8IY92 1834 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 NPHP1O15259 732 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 HMOX1P09601 288 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 MTHFSDQ2M296 383 aaKnown RBP15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 STYK1Q6J9G0 422 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 AIDAQ96BJ3 306 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 PRDM10Q9NQV6 1147 aa15.54■□□□□ 0.08
TRAPPC9-203ENST00000517667 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
TRAPPC9-203ENST00000517667 PASKQ96RG2 1323 aa15.53■□□□□ 0.08
TRAPPC9-203ENST00000517667 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC9-203ENST00000517667 IL6STP40189 918 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC9-203ENST00000517667 ST5P78524 1137 aa15.53■□□□□ 0.08
TRAPPC9-203ENST00000517667 LDHDQ86WU2 507 aa15.53■□□□□ 0.08
TRAPPC9-203ENST00000517667 SETDB2Q96T68 719 aa15.53■□□□□ 0.08
TRAPPC9-203ENST00000517667 HSPA5P11021 654 aaKnown RBP15.52■□□□□ 0.08
TRAPPC9-203ENST00000517667 PRPF40BQ6NWY9 871 aaKnown RBP15.52■□□□□ 0.08
TRAPPC9-203ENST00000517667 L3MBTL3Q96JM7 780 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC9-203ENST00000517667 ZNF330Q9Y3S2 320 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC9-203ENST00000517667 FOXN1O15353 648 aa15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 SRGNP10124 158 aa15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 CTCFP49711 727 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 TEFQ10587 303 aa15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms