RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CTSOP43234 321 aaPredicted RBP5.54□□□□□ -1.52
SKP1-203ENST00000517625 HIF1AQ16665 826 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 C6orf118Q5T5N4 469 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 LYSMD3Q7Z3D4 306 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 TXNDC2Q86VQ3 553 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 PRIMPOLQ96LW4 560 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 PURBQ96QR8 312 aaKnown RBP5.54□□□□□ -1.52
SKP1-203ENST00000517625 ZDHHC3Q9NYG2 299 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 FKBP5Q13451 457 aaPredicted RBP5.53□□□□□ -1.52
SKP1-203ENST00000517625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.53□□□□□ -1.527e-8■■■■■ 40
SKP1-203ENST00000517625 NBPF1Q3BBV0 1214 aa5.53□□□□□ -1.52
SKP1-203ENST00000517625 MYO19Q96H55 970 aa5.53□□□□□ -1.52
SKP1-203ENST00000517625 CABP1Q9NZU7 370 aa5.53□□□□□ -1.52
SKP1-203ENST00000517625 A0A1B0GTH6 734 aa5.52□□□□□ -1.53
SKP1-203ENST00000517625 CARNS1A5YM72 827 aa5.52□□□□□ -1.53
SKP1-203ENST00000517625 EML1O00423 815 aa5.52□□□□□ -1.53
SKP1-203ENST00000517625 NOS2P35228 1153 aa5.52□□□□□ -1.53
SKP1-203ENST00000517625 SF3B2Q13435 895 aaKnown RBP5.52□□□□□ -1.53
SKP1-203ENST00000517625 NBPF10Q6P3W6 841 aaKnown RBP5.52□□□□□ -1.53
SKP1-203ENST00000517625 AEBP1Q8IUX7 1158 aa5.52□□□□□ -1.53
SKP1-203ENST00000517625 ZFP42Q96MM3 310 aa5.52□□□□□ -1.53
SKP1-203ENST00000517625 TATP17735 454 aaPredicted RBP5.51□□□□□ -1.53
SKP1-203ENST00000517625 RTN1Q16799 776 aa5.51□□□□□ -1.53
SKP1-203ENST00000517625 C4orf17Q53FE4 359 aa5.51□□□□□ -1.53
SKP1-203ENST00000517625 L3MBTL2Q969R5 705 aa5.51□□□□□ -1.53
SKP1-203ENST00000517625 TRIM47Q96LD4 638 aa5.51□□□□□ -1.53
SKP1-203ENST00000517625 ZNF232Q9UNY5 417 aa5.51□□□□□ -1.53
SKP1-203ENST00000517625 USP3Q9Y6I4 520 aa5.51□□□□□ -1.53
SKP1-203ENST00000517625 ST8SIA5O15466 376 aa5.5□□□□□ -1.53
SKP1-203ENST00000517625 PLA2G4AP47712 749 aa5.5□□□□□ -1.53
SKP1-203ENST00000517625 LBRQ14739 615 aaKnown RBP5.5□□□□□ -1.53
SKP1-203ENST00000517625 C16orf46Q6P387 395 aa5.5□□□□□ -1.53
SKP1-203ENST00000517625 HELQQ8TDG4 1101 aa5.5□□□□□ -1.53
SKP1-203ENST00000517625 ZDHHC1Q8WTX9 485 aa5.5□□□□□ -1.53
SKP1-203ENST00000517625 CHMP7Q8WUX9 453 aaPredicted RBP5.5□□□□□ -1.53
SKP1-203ENST00000517625 DYRK1BQ9Y463 629 aa5.5□□□□□ -1.53
SKP1-203ENST00000517625 IVNS1ABPQ9Y6Y0 642 aa5.5□□□□□ -1.53
SKP1-203ENST00000517625 MAN1A2O60476 641 aa5.49□□□□□ -1.53
SKP1-203ENST00000517625 TBCELQ5QJ74 424 aa5.49□□□□□ -1.53
SKP1-203ENST00000517625 Q6ZNB5 142 aa5.49□□□□□ -1.53
SKP1-203ENST00000517625 TIMMDC1Q9NPL8 285 aa5.49□□□□□ -1.53
SKP1-203ENST00000517625 DNMT3LQ9UJW3 386 aa5.49□□□□□ -1.53
SKP1-203ENST00000517625 POU4F2Q12837 409 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 IER5Q5VY09 327 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 SND1Q7KZF4 910 aaKnown RBP eCLIP5.48□□□□□ -1.532e-12■■□□□ 11.8
SKP1-203ENST00000517625 PRICKLE2Q7Z3G6 844 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 ALDH16A1Q8IZ83 802 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 ABTB2Q8N961 1025 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 GMCL1Q96IK5 515 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 MKNK1Q9BUB5 465 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 PHACTR1Q9C0D0 580 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 QTRT2Q9H974 415 aaKnown RBP5.48□□□□□ -1.53
SKP1-203ENST00000517625 ANKIB1Q9P2G1 1089 aa5.48□□□□□ -1.53
SKP1-203ENST00000517625 SOWAHDA6NJG2 315 aa5.47□□□□□ -1.53
SKP1-203ENST00000517625 ICMTO60725 284 aa5.47□□□□□ -1.53
SKP1-203ENST00000517625 LGR5O75473 907 aa5.47□□□□□ -1.53
SKP1-203ENST00000517625 FAM13AO94988 1023 aa5.47□□□□□ -1.53
SKP1-203ENST00000517625 NPR3P17342 541 aa5.47□□□□□ -1.53
SKP1-203ENST00000517625 GTF3C2Q8WUA4 911 aaPredicted RBP5.47□□□□□ -1.53
SKP1-203ENST00000517625 CRISPLD1Q9H336 500 aa5.47□□□□□ -1.53
SKP1-203ENST00000517625 F11P03951 625 aa5.46□□□□□ -1.54
SKP1-203ENST00000517625 ATP4AP20648 1035 aa5.46□□□□□ -1.54
SKP1-203ENST00000517625 BRD2P25440 801 aaKnown RBP5.46□□□□□ -1.54
SKP1-203ENST00000517625 FKBP4Q02790 459 aaKnown RBP eCLIP5.46□□□□□ -1.54
SKP1-203ENST00000517625 TRIM26Q12899 539 aaPredicted RBP5.46□□□□□ -1.54
SKP1-203ENST00000517625 C11orf91Q3C1V1 193 aa5.46□□□□□ -1.54
SKP1-203ENST00000517625 ALKBH2Q6NS38 261 aa5.46□□□□□ -1.54
SKP1-203ENST00000517625 NLRP8Q86W28 1048 aa5.46□□□□□ -1.54
SKP1-203ENST00000517625 RHPN1Q8TCX5 695 aa5.46□□□□□ -1.54
SKP1-203ENST00000517625 STIM2Q9P246 746 aa5.46□□□□□ -1.54
SKP1-203ENST00000517625 FIGNL2A6NMB9 653 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 TGFBR3LH3BV60 316 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 H7C1W4 665 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 MSX1P28360 303 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 TXLNAP40222 546 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 SERPINB4P48594 390 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 COX20Q5RI15 118 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 SH3PXD2AQ5TCZ1 1133 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 SAMD5Q5TGI4 173 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 GLYCTKQ8IVS8 523 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 PGBD3Q8N328 593 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 AIDAQ96BJ3 306 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 FAM13BQ9NYF5 915 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 SEPT3Q9UH03 358 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 DACH1Q9UI36 760 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 HCN4Q9Y3Q4 1203 aa5.45□□□□□ -1.54
SKP1-203ENST00000517625 DNMT3AQ9Y6K1 912 aaPredicted RBP5.45□□□□□ -1.54
SKP1-203ENST00000517625 SLC35F4A4IF30 521 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 H3BRB1 525 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 TNFRSF10BO14763 440 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 ABL1P00519 1130 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 RHOQP17081 205 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 PHKA2P46019 1235 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 PTSQ03393 145 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 EFHC2Q5JST6 749 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 TMCO4Q5TGY1 634 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 FIGNL1Q6PIW4 674 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 BICDL1Q6ZP65 573 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 C7orf43Q8WVR3 580 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms