RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 USPL1Q5W0Q7 1092 aa11.34□□□□□ -0.59
CTNNA1-203ENST00000517534 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
CTNNA1-203ENST00000517534 C4AP0C0L4 1744 aa11.34□□□□□ -0.59
CTNNA1-203ENST00000517534 DIAPH1O60610 1272 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-203ENST00000517534 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-203ENST00000517534 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
CTNNA1-203ENST00000517534 NMRK2Q9NPI5 230 aa11.33□□□□□ -0.6
CTNNA1-203ENST00000517534 NARFQ9UHQ1 456 aa11.33□□□□□ -0.6
CTNNA1-203ENST00000517534 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
CTNNA1-203ENST00000517534 ZPR1O75312 459 aa11.32□□□□□ -0.6
CTNNA1-203ENST00000517534 TOMM70O94826 608 aa11.32□□□□□ -0.6
CTNNA1-203ENST00000517534 NFIXQ14938 502 aa11.32□□□□□ -0.6
CTNNA1-203ENST00000517534 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-203ENST00000517534 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
CTNNA1-203ENST00000517534 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-203ENST00000517534 MRC1P22897 1456 aa11.32□□□□□ -0.6
CTNNA1-203ENST00000517534 IL17REQ8NFR9 667 aa11.31□□□□□ -0.6
CTNNA1-203ENST00000517534 N4BP2Q86UW6 1770 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-203ENST00000517534 KCPQ6ZWJ8 1503 aa11.3□□□□□ -0.6
CTNNA1-203ENST00000517534 TJP1Q07157 1748 aa11.3□□□□□ -0.6
CTNNA1-203ENST00000517534 DNAJC5GQ8N7S2 189 aa11.3□□□□□ -0.6
CTNNA1-203ENST00000517534 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
CTNNA1-203ENST00000517534 COL15A1P39059 1388 aa11.29□□□□□ -0.6
CTNNA1-203ENST00000517534 SERPINB2P05120 415 aa11.29□□□□□ -0.6
CTNNA1-203ENST00000517534 CANXP27824 592 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-203ENST00000517534 APLP1P51693 650 aa11.29□□□□□ -0.6
CTNNA1-203ENST00000517534 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-203ENST00000517534 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
CTNNA1-203ENST00000517534 PRELPP51888 382 aa11.28□□□□□ -0.6
CTNNA1-203ENST00000517534 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-203ENST00000517534 RNF181Q9P0P0 153 aa11.28□□□□□ -0.6
CTNNA1-203ENST00000517534 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
CTNNA1-203ENST00000517534 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.6
CTNNA1-203ENST00000517534 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-203ENST00000517534 STARD3NLO95772 234 aa11.27□□□□□ -0.61
CTNNA1-203ENST00000517534 ZNF790Q6PG37 636 aa11.27□□□□□ -0.61
CTNNA1-203ENST00000517534 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
CTNNA1-203ENST00000517534 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-203ENST00000517534 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 GNAT3A8MTJ3 354 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 RASSF7Q02833 373 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 C2CD5Q86YS7 1000 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 TTC5Q8N0Z6 440 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 CARMIL3Q8ND23 1372 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 HEG1Q9ULI3 1381 aa11.26□□□□□ -0.61
CTNNA1-203ENST00000517534 A0A087WZG4 1122 aa11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 KCNQ3O43525 872 aa11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 TEFQ10587 303 aa11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 CNGB1Q14028 1251 aaPredicted RBP11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 TBC1D9BQ66K14 1250 aa11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 TTLL6Q8N841 843 aa11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 PCNTO95613 3336 aa11.25□□□□□ -0.61
CTNNA1-203ENST00000517534 NFKBIEO00221 500 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 A1BGP04217 495 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 HTRA3P83110 453 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 FSTL1Q12841 308 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 BICDL1Q6ZP65 573 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 RSPH6AQ9H0K4 717 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 CEMIPQ8WUJ3 1361 aa11.24□□□□□ -0.61
CTNNA1-203ENST00000517534 H0YIN7 160 aa11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 LMNB1P20700 586 aa11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 C16orf71Q8IYS4 520 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 FMNL2Q96PY5 1086 aa11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 BRIP1Q9BX63 1249 aa11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
CTNNA1-203ENST00000517534 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
CTNNA1-203ENST00000517534 PRKAR2BP31323 418 aa11.22□□□□□ -0.61
CTNNA1-203ENST00000517534 PRR5LQ6MZQ0 368 aa11.22□□□□□ -0.61
CTNNA1-203ENST00000517534 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
CTNNA1-203ENST00000517534 NRXN2Q9P2S2 1712 aa11.22□□□□□ -0.61
CTNNA1-203ENST00000517534 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
CTNNA1-203ENST00000517534 GLTPD2A6NH11 291 aa11.21□□□□□ -0.61
CTNNA1-203ENST00000517534 BTBD11A6QL63 1104 aa11.21□□□□□ -0.61
CTNNA1-203ENST00000517534 POTECB2RU33 542 aa11.21□□□□□ -0.61
CTNNA1-203ENST00000517534 KLRG1Q96E93 195 aa11.21□□□□□ -0.61
CTNNA1-203ENST00000517534 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
CTNNA1-203ENST00000517534 PDE6BP35913 854 aa11.2□□□□□ -0.62
CTNNA1-203ENST00000517534 ZNF622Q969S3 477 aaKnown RBP eCLIP11.2□□□□□ -0.62
CTNNA1-203ENST00000517534 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
CTNNA1-203ENST00000517534 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-203ENST00000517534 UBR2Q8IWV8 1755 aa11.2□□□□□ -0.62
CTNNA1-203ENST00000517534 C21orf2O43822 256 aa11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 VEGFAP15692 232 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 PPP2R1AP30153 589 aa11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 SMC1BQ8NDV3 1235 aa11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 SETDB2Q96T68 719 aa11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 AFDNP55196 1824 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-203ENST00000517534 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 SRGNP10124 158 aa11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 PIP4K2AP48426 406 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms