RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 NDFIP2Q9NV92 336 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 ZDHHC3Q9NYG2 299 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 CABP1Q9NZU7 370 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 SCHIP1Q9P0W5 487 aaPredicted RBP6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 BNIP3LO60238 219 aa6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 BMP4P12644 408 aa6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 ATP1A2P50993 1020 aa6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 GOLGA6L1Q8N7Z2 621 aa6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 ADAMTS19Q8TE59 1207 aa6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 ZCCHC2Q9C0B9 1178 aaKnown RBP6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 ZNF358Q9NW07 568 aa6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 DNMT3AQ9Y6K1 912 aaPredicted RBP6.6□□□□□ -1.35
RNU4-49P-201ENST00000516080 A0A1W2PNR3 127 aa6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 USP17L3A6NCW0 530 aa6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 USP17L4A6NCW7 530 aa6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 ATXN7O15265 892 aaPredicted RBP6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 ATP9BO43861 1147 aa6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 USP17L2Q6R6M4 530 aa6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 USP17L1Q7RTZ2 530 aa6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 DNAAF2Q9NVR5 837 aaKnown RBP6.59□□□□□ -1.35
RNU4-49P-201ENST00000516080 GALNT6Q8NCL4 622 aa6.58□□□□□ -1.36
RNU4-49P-201ENST00000516080 GJA3Q9Y6H8 435 aa6.58□□□□□ -1.36
RNU4-49P-201ENST00000516080 USP3Q9Y6I4 520 aa6.58□□□□□ -1.36
RNU4-49P-201ENST00000516080 CNTNAP5Q8WYK1 1306 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 C2CD2LO14523 706 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 EPHA4P54764 986 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 FOXK2Q01167 660 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 CTBSQ01459 385 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 TEAD4Q15561 434 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 CCDC102BQ68D86 513 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 BICDL1Q6ZP65 573 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 SLCO4C1Q6ZQN7 724 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 PROSER2Q86WR7 435 aaPredicted RBP6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 LARGE2Q8N3Y3 721 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 TPCN2Q8NHX9 752 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 EDARADDQ8WWZ3 215 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 UCN2Q96RP3 112 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 ZIC5Q96T25 663 aa6.57□□□□□ -1.36
RNU4-49P-201ENST00000516080 PALM3A6NDB9 673 aaPredicted RBP6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 ZBTB7BO15156 539 aaPredicted RBP6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 IGHA1P01876 353 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 ARAFP10398 606 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 TNP2Q05952 138 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 FAM182BQ5T319 152 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 SAMD5Q5TGI4 173 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 SLC9A9Q8IVB4 645 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 TNS4Q8IZW8 715 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 FNBP4Q8N3X1 1017 aaPredicted RBP6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 L3MBTL2Q969R5 705 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 CLUAP1Q96AJ1 413 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 MKRN1Q9UHC7 482 aaKnown RBP6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 RBM19Q9Y4C8 960 aaKnown RBP6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 GPC6Q9Y625 555 aaPredicted RBP6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 PARP3Q9Y6F1 533 aa6.56□□□□□ -1.36
RNU4-49P-201ENST00000516080 M0R2N6 131 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 FAM157BP0CG42 384 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 MAPTP10636 758 aaKnown RBP6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 NOS2P35228 1153 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 CLDN10P78369 228 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 OGFOD1Q8N543 542 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 ZDHHC1Q8WTX9 485 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 GGA1Q9UJY5 639 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 ZNF232Q9UNY5 417 aa6.55□□□□□ -1.36
RNU4-49P-201ENST00000516080 SERTM1A2A2V5 107 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 DCDC2BA2VCK2 349 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 SHISA8B8ZZ34 492 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 KHNYNO15037 678 aaKnown RBP6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 LAMC2Q13753 1193 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 C1orf229Q6ZS94 237 aaPredicted RBP6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 GLMNQ92990 594 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 NEUROD4Q9HD90 331 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 AVENQ9NQS1 362 aaPredicted RBP6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 MKL2Q9ULH7 1088 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 CHMP3Q9Y3E7 222 aa6.54□□□□□ -1.36
RNU4-49P-201ENST00000516080 A6NJR5 290 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 PIK3R2O00459 728 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 EPXP11678 715 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 AMPD1P23109 780 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 ADH6P28332 368 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 TXLNAP40222 546 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 GPAT2Q6NUI2 795 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 SIX5Q8N196 739 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 DCAF5Q96JK2 942 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 RRAGCQ9HB90 399 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
RNU4-49P-201ENST00000516080 NEURL1BA8MQ27 555 aa6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 EML1O00423 815 aa6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 CD33P20138 364 aa6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 PSMA6P60900 246 aaKnown RBP6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 SNRPNP63162 240 aaKnown RBP6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 TBCELQ5QJ74 424 aa6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 C1orf53Q5VUE5 145 aa6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 ALYREFQ86V81 257 aaKnown RBP6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 MARK1Q9P0L2 795 aa6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 PRR12Q9ULL5 1215 aa6.52□□□□□ -1.37
RNU4-49P-201ENST00000516080 EFSO43281 561 aa6.51□□□□□ -1.37
RNU4-49P-201ENST00000516080 RASA1P20936 1047 aa6.51□□□□□ -1.37
RNU4-49P-201ENST00000516080 HIRAP54198 1017 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms