RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 FAM208AQ9UK61 1670 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 FSD2A1L4K1 749 aa9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 TBC1D32Q96NH3 1257 aa9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 TBX22Q9Y458 520 aa9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 KIF3AQ9Y496 699 aa9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 N4BP2Q86UW6 1770 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 MSNP26038 577 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 TWISTNBQ3B726 338 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 NCAPGQ9BPX3 1015 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 CRB1P82279 1406 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 SULT6B1Q6IMI4 303 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 PIK3R5Q8WYR1 880 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 MRVI1Q9Y6F6 885 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 FAM177A1Q8N128 213 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 ARHGEF10O15013 1369 aa9.07□□□□□ -0.96
PDLIM5-219ENST00000514743 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 NUCB1Q02818 461 aa9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 TTC21AQ8NDW8 1320 aa9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 KDRP35968 1356 aa9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 EID1Q9Y6B2 187 aa9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 MAP3K19Q56UN5 1328 aa9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 ANKARQ7Z5J8 1434 aa9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 SIRT2Q8IXJ6 389 aa9.06□□□□□ -0.96
PDLIM5-219ENST00000514743 SBNO1A3KN83 1393 aa9.05□□□□□ -0.96
PDLIM5-219ENST00000514743 TDO2P48775 406 aa9.05□□□□□ -0.96
PDLIM5-219ENST00000514743 DCAF8L1A6NGE4 600 aa9.05□□□□□ -0.96
PDLIM5-219ENST00000514743 POLD1P28340 1107 aa9.05□□□□□ -0.96
PDLIM5-219ENST00000514743 GZF1Q9H116 711 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-219ENST00000514743 C1orf115Q9H7X2 142 aa9.05□□□□□ -0.96
PDLIM5-219ENST00000514743 ADAMTSL3P82987 1691 aa9.05□□□□□ -0.96
PDLIM5-219ENST00000514743 FLT4P35916 1363 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 RGPD2P0DJD1 1756 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 CHL1O00533 1208 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 MPHOSPH10O00566 681 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 KRT24Q2M2I5 525 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 HSP90AB4PQ58FF6 505 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 RINLQ6ZS11 566 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 TUBGCP6Q96RT7 1819 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 KIAA0232Q92628 1395 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 MCM10Q7L590 875 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 ATP10DQ9P241 1426 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 KIF24Q5T7B8 1368 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 CCDC96Q2M329 555 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 ZSCAN30Q86W11 494 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 RBM28Q9NW13 759 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 CACNA1FO60840 1977 aa9.04□□□□□ -0.96
PDLIM5-219ENST00000514743 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-219ENST00000514743 TULP2O00295 520 aa9.03□□□□□ -0.96
PDLIM5-219ENST00000514743 ATP2B3Q16720 1220 aa9.03□□□□□ -0.96
PDLIM5-219ENST00000514743 IGSF1Q8N6C5 1336 aa9.03□□□□□ -0.96
PDLIM5-219ENST00000514743 CHD1LQ86WJ1 897 aa9.03□□□□□ -0.96
PDLIM5-219ENST00000514743 ANTXR1Q9H6X2 564 aa9.03□□□□□ -0.96
PDLIM5-219ENST00000514743 THEMISQ8N1K5 641 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-219ENST00000514743 FOXO3O43524 673 aa9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 KCNA6P17658 529 aa9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 LNPKQ9C0E8 428 aa9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 GRPEL1Q9HAV7 217 aa9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 ZKSCAN8Q15776 578 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 CALCOCO1Q9P1Z2 691 aa9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 NFAT5O94916 1531 aa9.02□□□□□ -0.97
PDLIM5-219ENST00000514743 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 DNAJC14Q6Y2X3 702 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 GCC1Q96CN9 775 aa9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 DNAJC21Q5F1R6 531 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 INTS3Q68E01 1043 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 API5Q9BZZ5 524 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 KDM3BQ7LBC6 1761 aa9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 MSH6P52701 1360 aa9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 EYA1Q99502 592 aa9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 TMX1Q9H3N1 280 aa9.01□□□□□ -0.97
PDLIM5-219ENST00000514743 BORCS6Q96GS4 357 aa9□□□□□ -0.97
PDLIM5-219ENST00000514743 UPF2Q9HAU5 1272 aaKnown RBP9□□□□□ -0.97
PDLIM5-219ENST00000514743 ZNF219Q9P2Y4 722 aaPredicted RBP9□□□□□ -0.97
PDLIM5-219ENST00000514743 MED1Q15648 1581 aaPredicted RBP9□□□□□ -0.97
PDLIM5-219ENST00000514743 SASS6Q6UVJ0 657 aa9□□□□□ -0.97
PDLIM5-219ENST00000514743 C22orf23Q9BZE7 217 aa9□□□□□ -0.97
PDLIM5-219ENST00000514743 RSPH14Q9UHP6 348 aa9□□□□□ -0.97
PDLIM5-219ENST00000514743 MFAP1P55081 439 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 BIRC2Q13490 618 aa8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 BMP2KLQ5H9B9 411 aa8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 TSHZ1Q6ZSZ6 1077 aa8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 NGDNQ8NEJ9 315 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 FEZ2Q9UHY8 353 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 LMO7Q8WWI1 1683 aa8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 ZBTB7CA1YPR0 619 aa8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 BECN1Q14457 450 aa8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 DONSONQ9NYP3 566 aa8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 BSDC1Q9NW68 430 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-219ENST00000514743 NCOA3Q9Y6Q9 1424 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 HOXC9P31274 260 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 ANKRD45Q5TZF3 282 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 TOMM22Q9NS69 142 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 MIS18AQ9NYP9 233 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 TRPM3Q9HCF6 1732 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms