RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
YIPF3-217ENST00000514627 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
YIPF3-217ENST00000514627 ADAMTS7Q9UKP4 1686 aa16.8■□□□□ 0.28
YIPF3-217ENST00000514627 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
YIPF3-217ENST00000514627 DALRD3Q5D0E6 543 aaKnown RBP16.79■□□□□ 0.28
YIPF3-217ENST00000514627 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
YIPF3-217ENST00000514627 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
YIPF3-217ENST00000514627 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
YIPF3-217ENST00000514627 COL15A1P39059 1388 aa16.78■□□□□ 0.28
YIPF3-217ENST00000514627 A0A087WZG4 1122 aa16.78■□□□□ 0.28
YIPF3-217ENST00000514627 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
YIPF3-217ENST00000514627 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.28
YIPF3-217ENST00000514627 NFIXQ14938 502 aa16.77■□□□□ 0.28
YIPF3-217ENST00000514627 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
YIPF3-217ENST00000514627 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
YIPF3-217ENST00000514627 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
YIPF3-217ENST00000514627 CEMIPQ8WUJ3 1361 aa16.76■□□□□ 0.27
YIPF3-217ENST00000514627 HEG1Q9ULI3 1381 aa16.76■□□□□ 0.27
YIPF3-217ENST00000514627 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
YIPF3-217ENST00000514627 PRKAR2BP31323 418 aa16.75■□□□□ 0.27
YIPF3-217ENST00000514627 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
YIPF3-217ENST00000514627 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
YIPF3-217ENST00000514627 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
YIPF3-217ENST00000514627 KIF3CO14782 793 aa16.74■□□□□ 0.27
YIPF3-217ENST00000514627 SERPINB2P05120 415 aa16.74■□□□□ 0.27
YIPF3-217ENST00000514627 CHRNA5P30532 468 aa16.74■□□□□ 0.27
YIPF3-217ENST00000514627 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
YIPF3-217ENST00000514627 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
YIPF3-217ENST00000514627 HSPA6P17066 643 aa16.73■□□□□ 0.27
YIPF3-217ENST00000514627 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
YIPF3-217ENST00000514627 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
YIPF3-217ENST00000514627 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
YIPF3-217ENST00000514627 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
YIPF3-217ENST00000514627 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
YIPF3-217ENST00000514627 HTATSF1O43719 755 aaKnown RBP16.71■□□□□ 0.27
YIPF3-217ENST00000514627 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
YIPF3-217ENST00000514627 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
YIPF3-217ENST00000514627 UBR2Q8IWV8 1755 aa16.71■□□□□ 0.27
YIPF3-217ENST00000514627 TOMM70O94826 608 aa16.7■□□□□ 0.26
YIPF3-217ENST00000514627 H0YIN7 160 aa16.69■□□□□ 0.26
YIPF3-217ENST00000514627 TTLL6Q8N841 843 aa16.69■□□□□ 0.26
YIPF3-217ENST00000514627 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
YIPF3-217ENST00000514627 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
YIPF3-217ENST00000514627 C2CD5Q86YS7 1000 aa16.68■□□□□ 0.26
YIPF3-217ENST00000514627 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
YIPF3-217ENST00000514627 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
YIPF3-217ENST00000514627 KDM2BQ8NHM5 1336 aa16.68■□□□□ 0.26
YIPF3-217ENST00000514627 KCNQ3O43525 872 aa16.67■□□□□ 0.26
YIPF3-217ENST00000514627 A1BGP04217 495 aa16.67■□□□□ 0.26
YIPF3-217ENST00000514627 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
YIPF3-217ENST00000514627 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
YIPF3-217ENST00000514627 ZNF330Q9Y3S2 320 aaPredicted RBP16.67■□□□□ 0.26
YIPF3-217ENST00000514627 ARFGEF1Q9Y6D6 1849 aa16.67■□□□□ 0.26
YIPF3-217ENST00000514627 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
YIPF3-217ENST00000514627 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
YIPF3-217ENST00000514627 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
YIPF3-217ENST00000514627 PDE6BP35913 854 aa16.66■□□□□ 0.26
YIPF3-217ENST00000514627 MCM10Q7L590 875 aa16.66■□□□□ 0.26
YIPF3-217ENST00000514627 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
YIPF3-217ENST00000514627 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
YIPF3-217ENST00000514627 CARMIL3Q8ND23 1372 aa16.65■□□□□ 0.26
YIPF3-217ENST00000514627 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
YIPF3-217ENST00000514627 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
YIPF3-217ENST00000514627 NEFMP07197 916 aa16.65■□□□□ 0.26
YIPF3-217ENST00000514627 USP16Q9Y5T5 823 aa16.65■□□□□ 0.26
YIPF3-217ENST00000514627 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
YIPF3-217ENST00000514627 RGL2O15211 777 aa16.64■□□□□ 0.25
YIPF3-217ENST00000514627 LMNB1P20700 586 aa16.64■□□□□ 0.25
YIPF3-217ENST00000514627 APLP1P51693 650 aa16.64■□□□□ 0.25
YIPF3-217ENST00000514627 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
YIPF3-217ENST00000514627 PRR5LQ6MZQ0 368 aa16.64■□□□□ 0.25
YIPF3-217ENST00000514627 CLEC4GQ6UXB4 293 aa16.64■□□□□ 0.25
YIPF3-217ENST00000514627 DZIP3Q86Y13 1208 aaKnown RBP16.64■□□□□ 0.25
YIPF3-217ENST00000514627 C16orf71Q8IYS4 520 aaPredicted RBP16.64■□□□□ 0.25
YIPF3-217ENST00000514627 RBM46Q8TBY0 533 aaKnown RBP16.64■□□□□ 0.25
YIPF3-217ENST00000514627 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
YIPF3-217ENST00000514627 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
YIPF3-217ENST00000514627 FSTL1Q12841 308 aa16.61■□□□□ 0.25
YIPF3-217ENST00000514627 DCTN1Q14203 1278 aa16.61■□□□□ 0.25
YIPF3-217ENST00000514627 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
YIPF3-217ENST00000514627 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
YIPF3-217ENST00000514627 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
YIPF3-217ENST00000514627 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
YIPF3-217ENST00000514627 NPHP1O15259 732 aa16.6■□□□□ 0.25
YIPF3-217ENST00000514627 ST5P78524 1137 aa16.6■□□□□ 0.25
YIPF3-217ENST00000514627 RASSF7Q02833 373 aa16.6■□□□□ 0.25
YIPF3-217ENST00000514627 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
YIPF3-217ENST00000514627 STYK1Q6J9G0 422 aa16.59■□□□□ 0.25
YIPF3-217ENST00000514627 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
YIPF3-217ENST00000514627 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
YIPF3-217ENST00000514627 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
YIPF3-217ENST00000514627 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
YIPF3-217ENST00000514627 NFKBIEO00221 500 aa16.58■□□□□ 0.24
YIPF3-217ENST00000514627 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.24
YIPF3-217ENST00000514627 NBPF15Q8N660 670 aa16.58■□□□□ 0.24
YIPF3-217ENST00000514627 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
YIPF3-217ENST00000514627 SCN7AQ01118 1682 aa16.58■□□□□ 0.24
YIPF3-217ENST00000514627 C21orf2O43822 256 aa16.57■□□□□ 0.24
YIPF3-217ENST00000514627 SRGNP10124 158 aa16.57■□□□□ 0.24
YIPF3-217ENST00000514627 PIP4K2AP48426 406 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms