RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 RGS3P49796 1198 aa16.18■□□□□ 0.18
PVT1-203ENST00000513868 DOT1LQ8TEK3 1739 aa16.18■□□□□ 0.18
PVT1-203ENST00000513868 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
PVT1-203ENST00000513868 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
PVT1-203ENST00000513868 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
PVT1-203ENST00000513868 HYPKQ9NX55 129 aa16.17■□□□□ 0.18
PVT1-203ENST00000513868 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
PVT1-203ENST00000513868 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
PVT1-203ENST00000513868 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
PVT1-203ENST00000513868 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.16■□□□□ 0.18
PVT1-203ENST00000513868 BCL9LQ86UU0 1499 aa16.15■□□□□ 0.18
PVT1-203ENST00000513868 EXOC5O00471 708 aa16.15■□□□□ 0.18
PVT1-203ENST00000513868 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
PVT1-203ENST00000513868 CDCA7Q9BWT1 371 aaPredicted RBP16.15■□□□□ 0.18
PVT1-203ENST00000513868 PDE4AP27815 886 aa16.14■□□□□ 0.18
PVT1-203ENST00000513868 CEP85Q6P2H3 762 aa16.14■□□□□ 0.18
PVT1-203ENST00000513868 DNAAF4Q8WXU2 420 aa16.14■□□□□ 0.18
PVT1-203ENST00000513868 ARFGEF2Q9Y6D5 1785 aa16.14■□□□□ 0.17
PVT1-203ENST00000513868 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
PVT1-203ENST00000513868 RPAP2Q8IXW5 612 aaPredicted RBP16.14■□□□□ 0.17
PVT1-203ENST00000513868 BACH2Q9BYV9 841 aa16.14■□□□□ 0.17
PVT1-203ENST00000513868 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
PVT1-203ENST00000513868 NUCB1Q02818 461 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 KSR2Q6VAB6 950 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 BARGINQ6ZT62 677 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 PIGBQ92521 554 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 TMOD3Q9NYL9 352 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 SPATA31A6Q5VVP1 1343 aa16.13■□□□□ 0.17
PVT1-203ENST00000513868 BCL9O00512 1426 aa16.12■□□□□ 0.17
PVT1-203ENST00000513868 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
PVT1-203ENST00000513868 GNAI3P08754 354 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 FNBP4Q8N3X1 1017 aaPredicted RBP16.11■□□□□ 0.17
PVT1-203ENST00000513868 SRCIN1Q9C0H9 1055 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 DCTPP1Q9H773 170 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 NUP188Q5SRE5 1749 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 GNAI2P04899 355 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 MYL6BP14649 208 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 C8orf37Q96NL8 207 aa16.11■□□□□ 0.17
PVT1-203ENST00000513868 DDB1Q16531 1140 aa16.1■□□□□ 0.17
PVT1-203ENST00000513868 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
PVT1-203ENST00000513868 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
PVT1-203ENST00000513868 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
PVT1-203ENST00000513868 HSPA1LP34931 641 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 PIP4K2AP48426 406 aaPredicted RBP16.09■□□□□ 0.17
PVT1-203ENST00000513868 VPS72Q15906 364 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 NBPF14Q5TI25 921 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
PVT1-203ENST00000513868 COPS6Q7L5N1 327 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 CHD1LQ86WJ1 897 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
PVT1-203ENST00000513868 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.17
PVT1-203ENST00000513868 MARCH10Q8NA82 808 aaPredicted RBP16.08■□□□□ 0.17
PVT1-203ENST00000513868 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.17
PVT1-203ENST00000513868 TJP1Q07157 1748 aa16.08■□□□□ 0.16
PVT1-203ENST00000513868 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.16
PVT1-203ENST00000513868 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
PVT1-203ENST00000513868 ALDH1L1O75891 902 aa16.07■□□□□ 0.16
PVT1-203ENST00000513868 NBPF7P0C2Y1 421 aaPredicted RBP16.07■□□□□ 0.16
PVT1-203ENST00000513868 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
PVT1-203ENST00000513868 FAM161AQ3B820 660 aa16.07■□□□□ 0.16
PVT1-203ENST00000513868 ANKRD45Q5TZF3 282 aa16.07■□□□□ 0.16
PVT1-203ENST00000513868 LNPKQ9C0E8 428 aa16.07■□□□□ 0.16
PVT1-203ENST00000513868 IBTKQ9P2D0 1353 aaPredicted RBP16.06■□□□□ 0.16
PVT1-203ENST00000513868 THSD7AQ9UPZ6 1657 aa16.06■□□□□ 0.16
PVT1-203ENST00000513868 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
PVT1-203ENST00000513868 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
PVT1-203ENST00000513868 LINS1Q8NG48 757 aa16.06■□□□□ 0.16
PVT1-203ENST00000513868 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
PVT1-203ENST00000513868 A1BGP04217 495 aa16.05■□□□□ 0.16
PVT1-203ENST00000513868 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
PVT1-203ENST00000513868 PRIM1P49642 420 aaKnown RBP16.05■□□□□ 0.16
PVT1-203ENST00000513868 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
PVT1-203ENST00000513868 ANKRD13DQ6ZTN6 518 aa16.05■□□□□ 0.16
PVT1-203ENST00000513868 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
PVT1-203ENST00000513868 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
PVT1-203ENST00000513868 SLC4A9Q96Q91 983 aa16.05■□□□□ 0.16
PVT1-203ENST00000513868 METTL22Q9BUU2 404 aaPredicted RBP16.05■□□□□ 0.16
PVT1-203ENST00000513868 HMMRO75330 724 aa16.04■□□□□ 0.16
PVT1-203ENST00000513868 USP21Q9UK80 565 aa16.04■□□□□ 0.16
PVT1-203ENST00000513868 UTYO14607 1347 aa16.03■□□□□ 0.16
PVT1-203ENST00000513868 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
PVT1-203ENST00000513868 DNAJC10Q8IXB1 793 aa16.02■□□□□ 0.16
PVT1-203ENST00000513868 SYTL4Q96C24 671 aaPredicted RBP16.02■□□□□ 0.16
PVT1-203ENST00000513868 TEX13AQ9BXU3 409 aaPredicted RBP16.02■□□□□ 0.16
PVT1-203ENST00000513868 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.15
PVT1-203ENST00000513868 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.15
PVT1-203ENST00000513868 SSH3Q8TE77 659 aa16.02■□□□□ 0.15
PVT1-203ENST00000513868 GRM8O00222 908 aa16.01■□□□□ 0.15
PVT1-203ENST00000513868 POLA2Q14181 598 aa16.01■□□□□ 0.15
PVT1-203ENST00000513868 TTLL7Q6ZT98 887 aa16.01■□□□□ 0.15
PVT1-203ENST00000513868 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
PVT1-203ENST00000513868 TUBGCP6Q96RT7 1819 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms