RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 SMIM5Q71RC9 77 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 C4BP0C0L5 1744 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 POLD1P28340 1107 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 PDIA6Q15084 440 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 MPRIPQ6WCQ1 1025 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 PELP1Q8IZL8 1130 aaKnown RBP8.19□□□□□ -1.1
GYPB-213ENST00000513128 RAPGEF4Q8WZA2 1011 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 CGNL1Q0VF96 1302 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 FLT4P35916 1363 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 SMG6Q86US8 1419 aaKnown RBP8.19□□□□□ -1.1
GYPB-213ENST00000513128 NSD3Q9BZ95 1437 aa8.19□□□□□ -1.1
GYPB-213ENST00000513128 A6NJR5 290 aa8.18□□□□□ -1.1
GYPB-213ENST00000513128 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
GYPB-213ENST00000513128 AMHR2Q16671 573 aa8.18□□□□□ -1.1
GYPB-213ENST00000513128 KIF12Q96FN5 646 aa8.18□□□□□ -1.1
GYPB-213ENST00000513128 GOLGB1Q14789 3259 aaKnown RBP8.18□□□□□ -1.1
GYPB-213ENST00000513128 PCDH11XQ9BZA7 1347 aa8.18□□□□□ -1.1
GYPB-213ENST00000513128 PCDH11YQ9BZA8 1340 aa8.18□□□□□ -1.1
GYPB-213ENST00000513128 PALLDQ8WX93 1383 aa8.18□□□□□ -1.1
GYPB-213ENST00000513128 NCAPD2Q15021 1401 aa8.18□□□□□ -1.1
GYPB-213ENST00000513128 C1QTNF8P60827 252 aa8.17□□□□□ -1.1
GYPB-213ENST00000513128 KIF24Q5T7B8 1368 aa8.17□□□□□ -1.1
GYPB-213ENST00000513128 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
GYPB-213ENST00000513128 MAP2K5Q13163 448 aa8.16□□□□□ -1.1
GYPB-213ENST00000513128 PIGBQ92521 554 aa8.16□□□□□ -1.1
GYPB-213ENST00000513128 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
GYPB-213ENST00000513128 IRF6O14896 467 aa8.15□□□□□ -1.1
GYPB-213ENST00000513128 FECHP22830 423 aa8.15□□□□□ -1.1
GYPB-213ENST00000513128 EYA1Q99502 592 aa8.15□□□□□ -1.1
GYPB-213ENST00000513128 GPHNQ9NQX3 736 aaPredicted RBP8.15□□□□□ -1.1
GYPB-213ENST00000513128 WASHC2AQ641Q2 1341 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
GYPB-213ENST00000513128 PHF14O94880 888 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 ITPK1Q13572 414 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 LINC00116Q8NCU8 138 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 POLKQ9UBT6 870 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 ASAP1Q9ULH1 1129 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 KIAA1551Q9HCM1 1747 aa8.14□□□□□ -1.11
GYPB-213ENST00000513128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
GYPB-213ENST00000513128 TNNT2P45379 298 aaPredicted RBP8.13□□□□□ -1.11
GYPB-213ENST00000513128 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
GYPB-213ENST00000513128 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
GYPB-213ENST00000513128 CD2APQ9Y5K6 639 aa8.13□□□□□ -1.11
GYPB-213ENST00000513128 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 COL5A3P25940 1745 aaPredicted RBP8.12□□□□□ -1.11
GYPB-213ENST00000513128 LOC102724428A0A0B4J2F2 783 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 GIGYF1O75420 1035 aaPredicted RBP8.12□□□□□ -1.11
GYPB-213ENST00000513128 PHKG2P15735 406 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 SIK1P57059 783 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
GYPB-213ENST00000513128 SMARCC1Q92922 1105 aaPredicted RBP8.12□□□□□ -1.11
GYPB-213ENST00000513128 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 POLR3GLQ9BT43 218 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 SPG7Q9UQ90 795 aa8.12□□□□□ -1.11
GYPB-213ENST00000513128 N4BP2Q86UW6 1770 aaPredicted RBP8.12□□□□□ -1.11
GYPB-213ENST00000513128 KIF13BQ9NQT8 1826 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 GRIN3BO60391 1043 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 MS4A1P11836 297 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 DSG2Q14126 1118 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 MCM6Q14566 821 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.11□□□□□ -1.11
GYPB-213ENST00000513128 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 C4AP0C0L4 1744 aa8.11□□□□□ -1.11
GYPB-213ENST00000513128 ADCY9O60503 1353 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 KDRP35968 1356 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 IGSF1Q8N6C5 1336 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 MYH14Q7Z406 1995 aaKnown RBP8.1□□□□□ -1.11
GYPB-213ENST00000513128 GNPATO15228 680 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 SSFA2P28290 1259 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 ATP6V1AP38606 617 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 IFNL2Q8IZJ0 200 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
GYPB-213ENST00000513128 KDM6AO15550 1401 aaPredicted RBP8.1□□□□□ -1.11
GYPB-213ENST00000513128 GRXCR2A6NFK2 248 aa8.09□□□□□ -1.11
GYPB-213ENST00000513128 POTEHQ6S545 545 aa8.09□□□□□ -1.11
GYPB-213ENST00000513128 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
GYPB-213ENST00000513128 KCTD17Q8N5Z5 321 aa8.09□□□□□ -1.11
GYPB-213ENST00000513128 ZNF526Q8TF50 670 aaPredicted RBP8.09□□□□□ -1.11
GYPB-213ENST00000513128 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
GYPB-213ENST00000513128 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
GYPB-213ENST00000513128 PCGF6Q9BYE7 350 aa8.09□□□□□ -1.11
GYPB-213ENST00000513128 CICQ96RK0 1608 aaPredicted RBP8.09□□□□□ -1.11
GYPB-213ENST00000513128 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.12
GYPB-213ENST00000513128 MMP10P09238 476 aa8.08□□□□□ -1.12
GYPB-213ENST00000513128 TTLL12Q14166 644 aaPredicted RBP8.08□□□□□ -1.12
GYPB-213ENST00000513128 POM121Q96HA1 1249 aa8.08□□□□□ -1.12
GYPB-213ENST00000513128 PCMTD1Q96MG8 357 aaPredicted RBP8.08□□□□□ -1.12
GYPB-213ENST00000513128 PANK3Q9H999 370 aa8.08□□□□□ -1.12
GYPB-213ENST00000513128 TJP1Q07157 1748 aa8.08□□□□□ -1.12
GYPB-213ENST00000513128 VIRMAQ69YN4 1812 aaKnown RBP8.08□□□□□ -1.12
GYPB-213ENST00000513128 SCN11AQ9UI33 1791 aa8.07□□□□□ -1.12
GYPB-213ENST00000513128 PXDNLA1KZ92 1463 aa8.07□□□□□ -1.12
GYPB-213ENST00000513128 HSPA5P11021 654 aaKnown RBP8.07□□□□□ -1.12
GYPB-213ENST00000513128 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms