RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TRIM44Q96DX7 344 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 PRAM1Q96QH2 718 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 INO80BQ9C086 356 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 POGKQ9P215 609 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 LTBP4Q8N2S1 1624 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 MYOM2P54296 1465 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 PRAG1Q86YV5 1406 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 ROBO2Q9HCK4 1378 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 PITPNM1O00562 1244 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 MARSP56192 900 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 ENOX2Q16206 610 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 PUS10Q3MIT2 529 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 EGFL6Q8IUX8 553 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 TTC30BQ8N4P2 665 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 DDX27Q96GQ7 796 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 PAGR1Q9BTK6 254 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 ZSWIM4Q9H7M6 989 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 SPC25Q9HBM1 224 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 BSDC1Q9NW68 430 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 CUEDC1Q9NWM3 386 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 DMGDHQ9UI17 866 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 LRRC7Q96NW7 1537 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 ROCK2O75116 1388 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 PLEKHH1Q9ULM0 1364 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 MINK1Q8N4C8 1332 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 ANKRD33BA6NCL7 494 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 GPR37O15354 613 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 BMS1Q14692 1282 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 KLF15Q9UIH9 416 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 PDZRN3Q9UPQ7 1066 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 YTHDC2Q9H6S0 1430 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 ASXL1Q8IXJ9 1541 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 VAMP1P23763 118 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 SETDB1Q15047 1291 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 GIGYF2Q6Y7W6 1299 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 JDP2Q8WYK2 163 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 PIK3R5Q8WYR1 880 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 CARD11Q9BXL7 1154 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 PRKAG2Q9UGJ0 569 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 SFMBT1Q9UHJ3 866 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 TCEAL9Q9UHQ7 104 aa6.26□□□□□ -1.41
TRAPPC11-208ENST00000511955 NRXN1Q9ULB1 1477 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 MNX1P50219 401 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 POU5F1Q01860 360 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 CC2D1BQ5T0F9 858 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 FILIP1Q7Z7B0 1213 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 JAZF1Q86VZ6 243 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 ZCRB1Q8TBF4 217 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 OXER1Q8TDS5 423 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 STAG1Q8WVM7 1258 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 PCDH12Q9NPG4 1184 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 DIP2AQ14689 1571 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 ATF3P18847 181 aa6.25□□□□□ -1.41
TRAPPC11-208ENST00000511955 CHD2O14647 1828 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 CPS1P31327 1500 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 MSH6P52701 1360 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 PRC1O43663 620 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 USP5P45974 858 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 XPCQ01831 940 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 RNF187Q5TA31 235 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 DCAF8Q5TAQ9 597 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 ADAMTS19Q8TE59 1207 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 IL17RAQ96F46 866 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 LRPPRCP42704 1394 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 PIK3R4Q99570 1358 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 SETD1AO15047 1707 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 RRP9O43818 475 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 TOM1O60784 492 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 C7P10643 843 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 TERF1P54274 439 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 MAP2K5Q13163 448 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 ILDR1Q86SU0 546 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 DDX17Q92841 729 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 FAM212AQ96EL1 285 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 ZNF512BQ96KM6 892 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 MPHOSPH6Q99547 160 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 C19orf44Q9H6X5 657 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 IFT57Q9NWB7 429 aa6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 PUF60Q9UHX1 559 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 FEZ2Q9UHY8 353 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-208ENST00000511955 NKTRP30414 1462 aaKnown RBP6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 IRF6O14896 467 aa6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 GIGYF1O75420 1035 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 HDLBPQ00341 1268 aaKnown RBP6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 ZNF467Q7Z7K2 595 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 ENOX1Q8TC92 643 aaKnown RBP6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 TMC2Q8TDI7 906 aa6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 ZNF830Q96NB3 372 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 NEUROD6Q96NK8 337 aa6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 CARD10Q9BWT7 1032 aa6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 RSPH9Q9H1X1 276 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 POLR3EQ9NVU0 708 aa6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 ADGRB1O14514 1584 aa6.23□□□□□ -1.41
TRAPPC11-208ENST00000511955 HSP90AA1P07900 732 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 CD53P19397 219 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 PSEN1P49768 467 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 DHX8Q14562 1220 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 HDGFL1Q5TGJ6 251 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms