RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZNF530Q6P9A1 599 aaPredicted RBP16■□□□□ 0.15
RNF4-216ENST00000511859 MKRN1Q9UHC7 482 aaKnown RBP16■□□□□ 0.15
RNF4-216ENST00000511859 AFDNP55196 1824 aaKnown RBP15.99■□□□□ 0.15
RNF4-216ENST00000511859 H0YIN7 160 aa15.99■□□□□ 0.15
RNF4-216ENST00000511859 C1orf141Q5JVX7 400 aa15.99■□□□□ 0.15
RNF4-216ENST00000511859 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
RNF4-216ENST00000511859 DICER1Q9UPY3 1922 aaKnown RBP15.98■□□□□ 0.15
RNF4-216ENST00000511859 FOXN1O15353 648 aa15.98■□□□□ 0.15
RNF4-216ENST00000511859 NFIXQ14938 502 aa15.98■□□□□ 0.15
RNF4-216ENST00000511859 NARFQ9UHQ1 456 aa15.98■□□□□ 0.15
RNF4-216ENST00000511859 DLEC1Q9Y238 1755 aa15.97■□□□□ 0.15
RNF4-216ENST00000511859 TIAM2Q8IVF5 1701 aa15.97■□□□□ 0.15
RNF4-216ENST00000511859 NFKBIEO00221 500 aa15.97■□□□□ 0.15
RNF4-216ENST00000511859 SERPINB2P05120 415 aa15.97■□□□□ 0.15
RNF4-216ENST00000511859 CTCFP49711 727 aaPredicted RBP15.97■□□□□ 0.15
RNF4-216ENST00000511859 C2CD5Q86YS7 1000 aa15.97■□□□□ 0.15
RNF4-216ENST00000511859 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
RNF4-216ENST00000511859 ERFEQ4G0M1 354 aa15.96■□□□□ 0.15
RNF4-216ENST00000511859 AIDAQ96BJ3 306 aa15.96■□□□□ 0.15
RNF4-216ENST00000511859 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.15
RNF4-216ENST00000511859 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.14
RNF4-216ENST00000511859 SOS1Q07889 1333 aaPredicted RBP15.95■□□□□ 0.14
RNF4-216ENST00000511859 TJP1Q07157 1748 aa15.94■□□□□ 0.14
RNF4-216ENST00000511859 CNTNAP1P78357 1384 aa15.94■□□□□ 0.14
RNF4-216ENST00000511859 DNAJC10Q8IXB1 793 aa15.93■□□□□ 0.14
RNF4-216ENST00000511859 CYP19A1P11511 503 aaPredicted RBP15.92■□□□□ 0.14
RNF4-216ENST00000511859 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
RNF4-216ENST00000511859 FER1L6Q2WGJ9 1857 aa15.92■□□□□ 0.14
RNF4-216ENST00000511859 PCDH10Q9P2E7 1040 aa15.92■□□□□ 0.14
RNF4-216ENST00000511859 ZNF622Q969S3 477 aaKnown RBP eCLIP15.91■□□□□ 0.14
RNF4-216ENST00000511859 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
RNF4-216ENST00000511859 PASKQ96RG2 1323 aa15.91■□□□□ 0.14
RNF4-216ENST00000511859 LTBP3Q9NS15 1303 aa15.91■□□□□ 0.14
RNF4-216ENST00000511859 COL15A1P39059 1388 aa15.91■□□□□ 0.14
RNF4-216ENST00000511859 IQCA1LA6NCM1 817 aa15.9■□□□□ 0.14
RNF4-216ENST00000511859 C21orf2O43822 256 aa15.9■□□□□ 0.14
RNF4-216ENST00000511859 PDE6BP35913 854 aa15.9■□□□□ 0.14
RNF4-216ENST00000511859 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
RNF4-216ENST00000511859 WBP1LQ9NX94 342 aa15.9■□□□□ 0.14
RNF4-216ENST00000511859 SCN11AQ9UI33 1791 aa15.9■□□□□ 0.14
RNF4-216ENST00000511859 TMEM88BA6NKF7 163 aa15.89■□□□□ 0.13
RNF4-216ENST00000511859 DDNO94850 711 aaPredicted RBP15.89■□□□□ 0.13
RNF4-216ENST00000511859 POTEIP0CG38 1075 aa15.89■□□□□ 0.13
RNF4-216ENST00000511859 POTEJP0CG39 1038 aa15.89■□□□□ 0.13
RNF4-216ENST00000511859 VEGFBP49765 207 aa15.89■□□□□ 0.13
RNF4-216ENST00000511859 BRIP1Q9BX63 1249 aa15.89■□□□□ 0.13
RNF4-216ENST00000511859 TAOK3Q9H2K8 898 aa15.89■□□□□ 0.13
RNF4-216ENST00000511859 SLC52A2Q9HAB3 445 aa15.89■□□□□ 0.13
RNF4-216ENST00000511859 LBX1P52954 281 aa15.88■□□□□ 0.13
RNF4-216ENST00000511859 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
RNF4-216ENST00000511859 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
RNF4-216ENST00000511859 SCN4AP35499 1836 aa15.88■□□□□ 0.13
RNF4-216ENST00000511859 AKAP4Q5JQC9 854 aa15.87■□□□□ 0.13
RNF4-216ENST00000511859 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
RNF4-216ENST00000511859 ABHD8Q96I13 439 aa15.87■□□□□ 0.13
RNF4-216ENST00000511859 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
RNF4-216ENST00000511859 A0A087WZG4 1122 aa15.87■□□□□ 0.13
RNF4-216ENST00000511859 ITGBL1O95965 494 aaPredicted RBP15.87■□□□□ 0.13
RNF4-216ENST00000511859 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
RNF4-216ENST00000511859 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
RNF4-216ENST00000511859 SULT6B1Q6IMI4 303 aa15.87■□□□□ 0.13
RNF4-216ENST00000511859 L3MBTL3Q96JM7 780 aaPredicted RBP15.87■□□□□ 0.13
RNF4-216ENST00000511859 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
RNF4-216ENST00000511859 MAP2K1Q02750 393 aaPredicted RBP15.86■□□□□ 0.13
RNF4-216ENST00000511859 BICDL1Q6ZP65 573 aa15.86■□□□□ 0.13
RNF4-216ENST00000511859 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
RNF4-216ENST00000511859 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
RNF4-216ENST00000511859 CARMIL3Q8ND23 1372 aa15.86■□□□□ 0.13
RNF4-216ENST00000511859 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
RNF4-216ENST00000511859 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
RNF4-216ENST00000511859 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
RNF4-216ENST00000511859 ANKRD31Q8N7Z5 1873 aa15.85■□□□□ 0.13
RNF4-216ENST00000511859 STARD3NLO95772 234 aa15.84■□□□□ 0.13
RNF4-216ENST00000511859 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
RNF4-216ENST00000511859 EIF5P55010 431 aaKnown RBP15.84■□□□□ 0.13
RNF4-216ENST00000511859 RASSF10A6NK89 507 aa15.83■□□□□ 0.12
RNF4-216ENST00000511859 HSPA8P11142 646 aaKnown RBP15.83■□□□□ 0.12
RNF4-216ENST00000511859 RGS19P49795 217 aa15.83■□□□□ 0.12
RNF4-216ENST00000511859 MLLT1Q03111 559 aaPredicted RBP15.83■□□□□ 0.12
RNF4-216ENST00000511859 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
RNF4-216ENST00000511859 STYK1Q6J9G0 422 aa15.83■□□□□ 0.12
RNF4-216ENST00000511859 PRR5LQ6MZQ0 368 aa15.83■□□□□ 0.12
RNF4-216ENST00000511859 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
RNF4-216ENST00000511859 RNMTO43148 476 aaKnown RBP15.82■□□□□ 0.12
RNF4-216ENST00000511859 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
RNF4-216ENST00000511859 MASTLQ96GX5 879 aa15.81■□□□□ 0.12
RNF4-216ENST00000511859 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
RNF4-216ENST00000511859 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
RNF4-216ENST00000511859 SRGNP10124 158 aa15.8■□□□□ 0.12
RNF4-216ENST00000511859 IL13P35225 146 aa15.8■□□□□ 0.12
RNF4-216ENST00000511859 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
RNF4-216ENST00000511859 PRPF40BQ6NWY9 871 aaKnown RBP15.8■□□□□ 0.12
RNF4-216ENST00000511859 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
RNF4-216ENST00000511859 TEX13AQ9BXU3 409 aaPredicted RBP15.8■□□□□ 0.12
RNF4-216ENST00000511859 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
RNF4-216ENST00000511859 NPHP1O15259 732 aa15.79■□□□□ 0.12
RNF4-216ENST00000511859 CNTROBQ8N137 903 aa15.79■□□□□ 0.12
RNF4-216ENST00000511859 MRC1P22897 1456 aa15.78■□□□□ 0.12
RNF4-216ENST00000511859 EPHX2P34913 555 aa15.78■□□□□ 0.12
RNF4-216ENST00000511859 ST5P78524 1137 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms