RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 C9orf131Q5VYM1 1079 aa18.07■□□□□ 0.48
CLDND1-224ENST00000511667 NUDCQ9Y266 331 aa18.07■□□□□ 0.48
CLDND1-224ENST00000511667 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
CLDND1-224ENST00000511667 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
CLDND1-224ENST00000511667 INTS5Q6P9B9 1019 aaKnown RBP18.06■□□□□ 0.48
CLDND1-224ENST00000511667 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
CLDND1-224ENST00000511667 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
CLDND1-224ENST00000511667 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
CLDND1-224ENST00000511667 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
CLDND1-224ENST00000511667 RTCBQ9Y3I0 505 aaKnown RBP18.05■□□□□ 0.48
CLDND1-224ENST00000511667 SLC39A6Q13433 755 aa18.04■□□□□ 0.48
CLDND1-224ENST00000511667 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
CLDND1-224ENST00000511667 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
CLDND1-224ENST00000511667 TNRC6CQ9HCJ0 1690 aaKnown RBP18.03■□□□□ 0.48
CLDND1-224ENST00000511667 U2AF1L5P0DN76 240 aaPredicted RBP18.03■□□□□ 0.48
CLDND1-224ENST00000511667 CYP19A1P11511 503 aaPredicted RBP18.03■□□□□ 0.48
CLDND1-224ENST00000511667 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLDND1-224ENST00000511667 RRAGCQ9HB90 399 aa18.03■□□□□ 0.48
CLDND1-224ENST00000511667 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
CLDND1-224ENST00000511667 A0A0G2JLW4 131 aa18.02■□□□□ 0.48
CLDND1-224ENST00000511667 MMP10P09238 476 aa18.02■□□□□ 0.48
CLDND1-224ENST00000511667 GYS1P13807 737 aa18.02■□□□□ 0.48
CLDND1-224ENST00000511667 RALBP1Q15311 655 aa18.02■□□□□ 0.48
CLDND1-224ENST00000511667 DNAJC10Q8IXB1 793 aa18.02■□□□□ 0.48
CLDND1-224ENST00000511667 PLEKHF1Q96S99 279 aa18.02■□□□□ 0.48
CLDND1-224ENST00000511667 HTATSF1O43719 755 aaKnown RBP18.01■□□□□ 0.47
CLDND1-224ENST00000511667 ZNF790Q6PG37 636 aa18■□□□□ 0.47
CLDND1-224ENST00000511667 NLGN1Q8N2Q7 840 aa18■□□□□ 0.47
CLDND1-224ENST00000511667 SOS1Q07889 1333 aaPredicted RBP17.99■□□□□ 0.47
CLDND1-224ENST00000511667 USP42Q9H9J4 1324 aaKnown RBP17.99■□□□□ 0.47
CLDND1-224ENST00000511667 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
CLDND1-224ENST00000511667 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
CLDND1-224ENST00000511667 DDX10Q13206 875 aaKnown RBP17.98■□□□□ 0.47
CLDND1-224ENST00000511667 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
CLDND1-224ENST00000511667 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
CLDND1-224ENST00000511667 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
CLDND1-224ENST00000511667 DPEP1P16444 411 aa17.97■□□□□ 0.47
CLDND1-224ENST00000511667 TEFQ10587 303 aa17.97■□□□□ 0.47
CLDND1-224ENST00000511667 ARFGEF1Q9Y6D6 1849 aa17.97■□□□□ 0.47
CLDND1-224ENST00000511667 RFC4P35249 363 aa17.96■□□□□ 0.47
CLDND1-224ENST00000511667 DLG5Q8TDM6 1919 aa17.96■□□□□ 0.47
CLDND1-224ENST00000511667 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
CLDND1-224ENST00000511667 KCNQ3O43525 872 aa17.94■□□□□ 0.46
CLDND1-224ENST00000511667 TM4SF1P30408 202 aa17.94■□□□□ 0.46
CLDND1-224ENST00000511667 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
CLDND1-224ENST00000511667 PRDM10Q9NQV6 1147 aa17.94■□□□□ 0.46
CLDND1-224ENST00000511667 SRP68Q9UHB9 627 aaKnown RBP17.94■□□□□ 0.46
CLDND1-224ENST00000511667 FKBP8Q14318 412 aa17.93■□□□□ 0.46
CLDND1-224ENST00000511667 FAM161AQ3B820 660 aa17.93■□□□□ 0.46
CLDND1-224ENST00000511667 MCM10Q7L590 875 aa17.93■□□□□ 0.46
CLDND1-224ENST00000511667 TTC5Q8N0Z6 440 aa17.93■□□□□ 0.46
CLDND1-224ENST00000511667 TEX13AQ9BXU3 409 aaPredicted RBP17.93■□□□□ 0.46
CLDND1-224ENST00000511667 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
CLDND1-224ENST00000511667 COL15A1P39059 1388 aa17.92■□□□□ 0.46
CLDND1-224ENST00000511667 DDR1Q08345 913 aa17.92■□□□□ 0.46
CLDND1-224ENST00000511667 FMNL2Q96PY5 1086 aa17.92■□□□□ 0.46
CLDND1-224ENST00000511667 BCL2L12Q9HB09 334 aa17.92■□□□□ 0.46
CLDND1-224ENST00000511667 PIM2Q9P1W9 311 aa17.92■□□□□ 0.46
CLDND1-224ENST00000511667 NARFQ9UHQ1 456 aa17.92■□□□□ 0.46
CLDND1-224ENST00000511667 ZC3H4Q9UPT8 1303 aaKnown RBP17.92■□□□□ 0.46
CLDND1-224ENST00000511667 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
CLDND1-224ENST00000511667 BTBD11A6QL63 1104 aa17.91■□□□□ 0.46
CLDND1-224ENST00000511667 STARD3NLO95772 234 aa17.91■□□□□ 0.46
CLDND1-224ENST00000511667 VEGFAP15692 232 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-224ENST00000511667 NFE2L2Q16236 605 aa17.91■□□□□ 0.46
CLDND1-224ENST00000511667 KDM3BQ7LBC6 1761 aa17.9■□□□□ 0.46
CLDND1-224ENST00000511667 FOXN1O15353 648 aa17.9■□□□□ 0.46
CLDND1-224ENST00000511667 KCNA3P22001 575 aa17.9■□□□□ 0.46
CLDND1-224ENST00000511667 DCTN1Q14203 1278 aa17.9■□□□□ 0.46
CLDND1-224ENST00000511667 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
CLDND1-224ENST00000511667 SBF1O95248 1867 aa17.89■□□□□ 0.45
CLDND1-224ENST00000511667 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
CLDND1-224ENST00000511667 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-224ENST00000511667 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
CLDND1-224ENST00000511667 PRKRIP1Q9H875 184 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-224ENST00000511667 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
CLDND1-224ENST00000511667 SCN7AQ01118 1682 aa17.88■□□□□ 0.45
CLDND1-224ENST00000511667 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
CLDND1-224ENST00000511667 TAF7Q15545 349 aaPredicted RBP17.88■□□□□ 0.45
CLDND1-224ENST00000511667 USPL1Q5W0Q7 1092 aa17.88■□□□□ 0.45
CLDND1-224ENST00000511667 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
CLDND1-224ENST00000511667 CTCFP49711 727 aaPredicted RBP17.87■□□□□ 0.45
CLDND1-224ENST00000511667 AFDNP55196 1824 aaKnown RBP17.86■□□□□ 0.45
CLDND1-224ENST00000511667 GLTPD2A6NH11 291 aa17.86■□□□□ 0.45
CLDND1-224ENST00000511667 NFIXQ14938 502 aa17.86■□□□□ 0.45
CLDND1-224ENST00000511667 AIDAQ96BJ3 306 aa17.86■□□□□ 0.45
CLDND1-224ENST00000511667 CREBZFQ9NS37 354 aa17.86■□□□□ 0.45
CLDND1-224ENST00000511667 MKRN1Q9UHC7 482 aaKnown RBP17.86■□□□□ 0.45
CLDND1-224ENST00000511667 USP16Q9Y5T5 823 aa17.86■□□□□ 0.45
CLDND1-224ENST00000511667 PRAMEF22A3QJZ6 481 aa17.85■□□□□ 0.45
CLDND1-224ENST00000511667 ZPR1O75312 459 aa17.85■□□□□ 0.45
CLDND1-224ENST00000511667 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
CLDND1-224ENST00000511667 A0A087WZG4 1122 aa17.84■□□□□ 0.45
CLDND1-224ENST00000511667 A1BGP04217 495 aa17.84■□□□□ 0.45
CLDND1-224ENST00000511667 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
CLDND1-224ENST00000511667 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
CLDND1-224ENST00000511667 RGL2O15211 777 aa17.83■□□□□ 0.44
CLDND1-224ENST00000511667 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.44
CLDND1-224ENST00000511667 ABHD8Q96I13 439 aa17.83■□□□□ 0.44
CLDND1-224ENST00000511667 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms