RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ZSCAN1Q8NBB4 408 aa10.11□□□□□ -0.79
GYPB-212ENST00000511198 DYRK1BQ9Y463 629 aa10.11□□□□□ -0.79
GYPB-212ENST00000511198 RIMS1Q86UR5 1692 aaKnown RBP10.1□□□□□ -0.79
GYPB-212ENST00000511198 CDC14CA4D256 554 aa10.1□□□□□ -0.79
GYPB-212ENST00000511198 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
GYPB-212ENST00000511198 PCDHGA11Q9Y5H2 935 aa10.1□□□□□ -0.79
GYPB-212ENST00000511198 TTBK1Q5TCY1 1321 aaPredicted RBP10.09□□□□□ -0.79
GYPB-212ENST00000511198 SRCAPQ6ZRS2 3230 aa10.09□□□□□ -0.79
GYPB-212ENST00000511198 PTPRGP23470 1445 aa10.09□□□□□ -0.79
GYPB-212ENST00000511198 YEATS2Q9ULM3 1422 aa10.09□□□□□ -0.79
GYPB-212ENST00000511198 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
GYPB-212ENST00000511198 RNFT1Q5M7Z0 435 aa10.09□□□□□ -0.79
GYPB-212ENST00000511198 TAS1R3Q7RTX0 852 aa10.09□□□□□ -0.79
GYPB-212ENST00000511198 PROSER2Q86WR7 435 aaPredicted RBP10.09□□□□□ -0.79
GYPB-212ENST00000511198 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
GYPB-212ENST00000511198 COL25A1Q9BXS0 654 aaPredicted RBP10.09□□□□□ -0.79
GYPB-212ENST00000511198 IQSEC2Q5JU85 1478 aa10.09□□□□□ -0.79
GYPB-212ENST00000511198 INHAP05111 366 aa10.08□□□□□ -0.8
GYPB-212ENST00000511198 GDF10P55107 478 aa10.08□□□□□ -0.8
GYPB-212ENST00000511198 CNTNAP3BQ96NU0 1288 aa10.08□□□□□ -0.8
GYPB-212ENST00000511198 UCN2Q96RP3 112 aa10.08□□□□□ -0.8
GYPB-212ENST00000511198 CNTNAP3Q9BZ76 1288 aa10.08□□□□□ -0.8
GYPB-212ENST00000511198 TMEM229AB2RXF0 380 aa10.07□□□□□ -0.8
GYPB-212ENST00000511198 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
GYPB-212ENST00000511198 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
GYPB-212ENST00000511198 NCOA4Q13772 614 aa10.07□□□□□ -0.8
GYPB-212ENST00000511198 DBN1Q16643 649 aa10.07□□□□□ -0.8
GYPB-212ENST00000511198 EML3Q32P44 896 aa10.07□□□□□ -0.8
GYPB-212ENST00000511198 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
GYPB-212ENST00000511198 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
GYPB-212ENST00000511198 TIMMDC1Q9NPL8 285 aa10.07□□□□□ -0.8
GYPB-212ENST00000511198 USP17L5A8MUK1 530 aa10.06□□□□□ -0.8
GYPB-212ENST00000511198 HSPA1LP34931 641 aa10.06□□□□□ -0.8
GYPB-212ENST00000511198 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
GYPB-212ENST00000511198 GAS2L1Q99501 681 aaPredicted RBP10.06□□□□□ -0.8
GYPB-212ENST00000511198 ARID4BQ4LE39 1312 aaPredicted RBP10.06□□□□□ -0.8
GYPB-212ENST00000511198 A6NJR5 290 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 PHKA2P46019 1235 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 TLR1Q15399 786 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 C4orf17Q53FE4 359 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 TMEM214Q6NUQ4 689 aaKnown RBP10.05□□□□□ -0.8
GYPB-212ENST00000511198 PPARGC1BQ86YN6 1023 aaKnown RBP10.05□□□□□ -0.8
GYPB-212ENST00000511198 DEPDC4Q8N2C3 294 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 GMCL1Q96IK5 515 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 NOD1Q9Y239 953 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 MAGI3Q5TCQ9 1506 aa10.05□□□□□ -0.8
GYPB-212ENST00000511198 RIPOR1Q6ZS17 1223 aa10.04□□□□□ -0.8
GYPB-212ENST00000511198 F11P03951 625 aa10.03□□□□□ -0.8
GYPB-212ENST00000511198 GNASQ5JWF2 1037 aa10.03□□□□□ -0.8
GYPB-212ENST00000511198 PLEKHM2Q8IWE5 1019 aa10.03□□□□□ -0.8
GYPB-212ENST00000511198 RHBDD1Q8TEB9 315 aa10.03□□□□□ -0.8
GYPB-212ENST00000511198 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
GYPB-212ENST00000511198 CD109Q6YHK3 1445 aa10.02□□□□□ -0.81
GYPB-212ENST00000511198 SMTNP53814 917 aa10.02□□□□□ -0.81
GYPB-212ENST00000511198 GTF2IP78347 998 aa10.02□□□□□ -0.81
GYPB-212ENST00000511198 GAS6Q14393 721 aa10.02□□□□□ -0.81
GYPB-212ENST00000511198 GLMNQ92990 594 aa10.02□□□□□ -0.81
GYPB-212ENST00000511198 RGS17Q9UGC6 210 aaPredicted RBP10.02□□□□□ -0.81
GYPB-212ENST00000511198 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
GYPB-212ENST00000511198 UHRF1BP1LA0JNW5 1464 aa10.02□□□□□ -0.81
GYPB-212ENST00000511198 PTPRTO14522 1441 aa10.01□□□□□ -0.81
GYPB-212ENST00000511198 A0A1B0GTH6 734 aa10.01□□□□□ -0.81
GYPB-212ENST00000511198 H7C1W4 665 aa10.01□□□□□ -0.81
GYPB-212ENST00000511198 ATP9BO43861 1147 aa10.01□□□□□ -0.81
GYPB-212ENST00000511198 THBS1P07996 1170 aa10.01□□□□□ -0.81
GYPB-212ENST00000511198 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
GYPB-212ENST00000511198 ARAP3Q8WWN8 1544 aa10.01□□□□□ -0.81
GYPB-212ENST00000511198 USP17L3A6NCW0 530 aa10□□□□□ -0.81
GYPB-212ENST00000511198 USP17L4A6NCW7 530 aa10□□□□□ -0.81
GYPB-212ENST00000511198 MTFR1Q15390 333 aa10□□□□□ -0.81
GYPB-212ENST00000511198 USP17L2Q6R6M4 530 aa10□□□□□ -0.81
GYPB-212ENST00000511198 USP17L1Q7RTZ2 530 aa10□□□□□ -0.81
GYPB-212ENST00000511198 ZNF295-AS1Q8N0V1 137 aa10□□□□□ -0.81
GYPB-212ENST00000511198 IQSEC3Q9UPP2 1182 aaPredicted RBP10□□□□□ -0.81
GYPB-212ENST00000511198 KDM5BQ9UGL1 1544 aa10□□□□□ -0.81
GYPB-212ENST00000511198 ERICH3Q5RHP9 1530 aa9.99□□□□□ -0.81
GYPB-212ENST00000511198 GPR25O00155 361 aa9.99□□□□□ -0.81
GYPB-212ENST00000511198 ZBTB7BO15156 539 aaPredicted RBP9.99□□□□□ -0.81
GYPB-212ENST00000511198 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
GYPB-212ENST00000511198 GTPBP3Q969Y2 492 aaKnown RBP9.99□□□□□ -0.81
GYPB-212ENST00000511198 GPAMQ9HCL2 828 aa9.99□□□□□ -0.81
GYPB-212ENST00000511198 USP3Q9Y6I4 520 aa9.99□□□□□ -0.81
GYPB-212ENST00000511198 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
GYPB-212ENST00000511198 A6NJY4 79 aa9.98□□□□□ -0.81
GYPB-212ENST00000511198 RAPGEF3O95398 923 aa9.98□□□□□ -0.81
GYPB-212ENST00000511198 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
GYPB-212ENST00000511198 NUCKS1Q9H1E3 243 aaKnown RBP9.98□□□□□ -0.81
GYPB-212ENST00000511198 CDK2AP1O14519 115 aa9.97□□□□□ -0.81
GYPB-212ENST00000511198 MSX1P28360 303 aa9.97□□□□□ -0.81
GYPB-212ENST00000511198 CLDN10P78369 228 aa9.97□□□□□ -0.81
GYPB-212ENST00000511198 ZNF358Q9NW07 568 aa9.97□□□□□ -0.81
GYPB-212ENST00000511198 KIAA1024Q9UPX6 916 aa9.97□□□□□ -0.81
GYPB-212ENST00000511198 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
GYPB-212ENST00000511198 UACAQ9BZF9 1416 aa9.97□□□□□ -0.81
GYPB-212ENST00000511198 ZCCHC11Q5TAX3 1644 aaKnown RBP9.96□□□□□ -0.81
GYPB-212ENST00000511198 SRSF11Q05519 484 aaKnown RBP9.96□□□□□ -0.82
GYPB-212ENST00000511198 PSME1Q06323 249 aa9.96□□□□□ -0.82
GYPB-212ENST00000511198 UBAP2LQ14157 1087 aaKnown RBP9.96□□□□□ -0.82
GYPB-212ENST00000511198 FOXR1Q6PIV2 292 aa9.96□□□□□ -0.82
GYPB-212ENST00000511198 TRIM50Q86XT4 487 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms