RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 IL17REQ8NFR9 667 aa13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 PHACTR3Q96KR7 559 aa13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 MYH14Q7Z406 1995 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-227ENST00000508818 FCHSD2O94868 740 aa13.45□□□□□ -0.26
UBE2D3-227ENST00000508818 DPEP1P16444 411 aa13.45□□□□□ -0.26
UBE2D3-227ENST00000508818 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
UBE2D3-227ENST00000508818 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-227ENST00000508818 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 MRC1P22897 1456 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 A0A087WZG4 1122 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 C1QTNF8P60827 252 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 NARFQ9UHQ1 456 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 ZBTB1Q9Y2K1 713 aa13.44□□□□□ -0.26
UBE2D3-227ENST00000508818 ZNF496Q96IT1 587 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-227ENST00000508818 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-227ENST00000508818 PIM2Q9P1W9 311 aa13.43□□□□□ -0.26
UBE2D3-227ENST00000508818 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-227ENST00000508818 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 TJP1Q07157 1748 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 C10orf71Q711Q0 1435 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 ABCB7O75027 752 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 TM4SF1P30408 202 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 DDR1Q08345 913 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 ZNF526Q8TF50 670 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 COL15A1P39059 1388 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 UTRNP46939 3433 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
UBE2D3-227ENST00000508818 ATP10DQ9P241 1426 aa13.41□□□□□ -0.26
UBE2D3-227ENST00000508818 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
UBE2D3-227ENST00000508818 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
UBE2D3-227ENST00000508818 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-227ENST00000508818 HEG1Q9ULI3 1381 aa13.41□□□□□ -0.26
UBE2D3-227ENST00000508818 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-227ENST00000508818 NFIXQ14938 502 aa13.4□□□□□ -0.26
UBE2D3-227ENST00000508818 MCM10Q7L590 875 aa13.4□□□□□ -0.26
UBE2D3-227ENST00000508818 VIRMAQ69YN4 1812 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-227ENST00000508818 HTATSF1O43719 755 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-227ENST00000508818 SERPINB2P05120 415 aa13.39□□□□□ -0.27
UBE2D3-227ENST00000508818 EIF5P55010 431 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-227ENST00000508818 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
UBE2D3-227ENST00000508818 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-227ENST00000508818 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
UBE2D3-227ENST00000508818 CEMIPQ8WUJ3 1361 aa13.38□□□□□ -0.27
UBE2D3-227ENST00000508818 KCNQ3O43525 872 aa13.38□□□□□ -0.27
UBE2D3-227ENST00000508818 CHRNA5P30532 468 aa13.38□□□□□ -0.27
UBE2D3-227ENST00000508818 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-227ENST00000508818 TBC1D2BQ9UPU7 963 aa13.38□□□□□ -0.27
UBE2D3-227ENST00000508818 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-227ENST00000508818 KIF13BQ9NQT8 1826 aa13.37□□□□□ -0.27
UBE2D3-227ENST00000508818 NPHP1O15259 732 aa13.37□□□□□ -0.27
UBE2D3-227ENST00000508818 A1BGP04217 495 aa13.37□□□□□ -0.27
UBE2D3-227ENST00000508818 SNRPA1P09661 255 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-227ENST00000508818 KCNA3P22001 575 aa13.37□□□□□ -0.27
UBE2D3-227ENST00000508818 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
UBE2D3-227ENST00000508818 H0YIN7 160 aa13.36□□□□□ -0.27
UBE2D3-227ENST00000508818 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-227ENST00000508818 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
UBE2D3-227ENST00000508818 GOLGB1Q14789 3259 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-227ENST00000508818 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
UBE2D3-227ENST00000508818 RALBP1Q15311 655 aa13.35□□□□□ -0.27
UBE2D3-227ENST00000508818 C2CD5Q86YS7 1000 aa13.35□□□□□ -0.27
UBE2D3-227ENST00000508818 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
UBE2D3-227ENST00000508818 USP16Q9Y5T5 823 aa13.35□□□□□ -0.27
UBE2D3-227ENST00000508818 UBR2Q8IWV8 1755 aa13.35□□□□□ -0.27
UBE2D3-227ENST00000508818 ADCY9O60503 1353 aa13.34□□□□□ -0.27
UBE2D3-227ENST00000508818 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
UBE2D3-227ENST00000508818 TBC1D9BQ66K14 1250 aa13.34□□□□□ -0.27
UBE2D3-227ENST00000508818 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-227ENST00000508818 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-227ENST00000508818 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-227ENST00000508818 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
UBE2D3-227ENST00000508818 TTLL6Q8N841 843 aa13.33□□□□□ -0.28
UBE2D3-227ENST00000508818 MIS18AQ9NYP9 233 aa13.33□□□□□ -0.28
UBE2D3-227ENST00000508818 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
UBE2D3-227ENST00000508818 PDE6BP35913 854 aa13.32□□□□□ -0.28
UBE2D3-227ENST00000508818 PIP4K2AP48426 406 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-227ENST00000508818 ZNF622Q969S3 477 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBE2D3-227ENST00000508818 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
UBE2D3-227ENST00000508818 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
UBE2D3-227ENST00000508818 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-227ENST00000508818 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
UBE2D3-227ENST00000508818 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
UBE2D3-227ENST00000508818 ST5P78524 1137 aa13.31□□□□□ -0.28
UBE2D3-227ENST00000508818 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
UBE2D3-227ENST00000508818 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
UBE2D3-227ENST00000508818 RNF181Q9P0P0 153 aa13.31□□□□□ -0.28
UBE2D3-227ENST00000508818 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
UBE2D3-227ENST00000508818 CCDC24Q8N4L8 307 aa13.3□□□□□ -0.28
UBE2D3-227ENST00000508818 PLEKHF1Q96S99 279 aa13.3□□□□□ -0.28
UBE2D3-227ENST00000508818 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
UBE2D3-227ENST00000508818 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
UBE2D3-227ENST00000508818 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms