RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NEK11Q8NG66 645 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 EIF3CQ99613 913 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 TRIM6Q9C030 488 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 FHOD1Q9Y613 1164 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 CLASP1Q7Z460 1538 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 ELF1P32519 619 aa12.75□□□□□ -0.37
PDLIM5-210ENST00000508216 RASA3Q14644 834 aa12.75□□□□□ -0.37
PDLIM5-210ENST00000508216 CCDC112Q8NEF3 446 aa12.75□□□□□ -0.37
PDLIM5-210ENST00000508216 HELBQ8NG08 1087 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-210ENST00000508216 DNAAF4Q8WXU2 420 aa12.75□□□□□ -0.37
PDLIM5-210ENST00000508216 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-210ENST00000508216 A0A087WUV0 522 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 TTC19Q6DKK2 380 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 FBXO38Q6PIJ6 1188 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 NME8Q8N427 588 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 KIF21AQ7Z4S6 1674 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 CDKL5O76039 1030 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 SNUPNO95149 360 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 CYP2E1P05181 493 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 DDR1Q08345 913 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 MCM6Q14566 821 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 GIMAP7Q8NHV1 300 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 PIK3R5Q8WYR1 880 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 UBA5Q9GZZ9 404 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 BLOC1S6Q9UL45 172 aa12.74□□□□□ -0.37
PDLIM5-210ENST00000508216 RTN2O75298 545 aa12.73□□□□□ -0.37
PDLIM5-210ENST00000508216 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-210ENST00000508216 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-210ENST00000508216 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-210ENST00000508216 ZRANB2O95218 330 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 PLA2G4AP47712 749 aa12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 TADA2BQ86TJ2 420 aa12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 ACRBPQ8NEB7 543 aa12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 TCP11Q8WWU5 503 aa12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 RIPOR2Q9Y4F9 1068 aa12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 E9PCH4 1651 aa12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
PDLIM5-210ENST00000508216 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
PDLIM5-210ENST00000508216 BAG1Q99933 345 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-210ENST00000508216 TSPY26PQ9H489 355 aa12.71□□□□□ -0.37
PDLIM5-210ENST00000508216 KIF15Q9NS87 1388 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 H7C1W4 665 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 PLIN1O60240 522 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 NEBLO76041 1014 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 SSFA2P28290 1259 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 PEX19P40855 299 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 SMARCE1Q969G3 411 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 RYDENQ9NUL5 291 aaKnown RBP12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 MCM8Q9UJA3 840 aa12.71□□□□□ -0.38
PDLIM5-210ENST00000508216 ELP1O95163 1332 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 PECAM1P16284 738 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 IQCGQ9H095 443 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 ST7Q9NRC1 585 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 HOMER3Q9NSC5 361 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
PDLIM5-210ENST00000508216 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 FILIP1LQ4L180 1135 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 KCNB2Q92953 911 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 KIF2CQ99661 725 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 EPRSP07814 1512 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 GTPBP6O43824 516 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 IER5LQ5T953 404 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 CLIP2Q9UDT6 1046 aa12.69□□□□□ -0.38
PDLIM5-210ENST00000508216 RDXP35241 583 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 TMED1Q13445 227 aa12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 REXO1L1PQ8IX06 675 aa12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 PLEKHG4BQ96PX9 1271 aa12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 AKAP2Q9Y2D5 859 aa12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 PLXNC1O60486 1568 aa12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 CADPSQ9ULU8 1353 aa12.68□□□□□ -0.38
PDLIM5-210ENST00000508216 PES1O00541 588 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-210ENST00000508216 NLRP6P59044 892 aa12.67□□□□□ -0.38
PDLIM5-210ENST00000508216 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
PDLIM5-210ENST00000508216 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
PDLIM5-210ENST00000508216 ARPC5LQ9BPX5 153 aa12.67□□□□□ -0.38
PDLIM5-210ENST00000508216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDLIM5-210ENST00000508216 CXorf38Q8TB03 319 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms