RNA–Protein interactions for RNA: ENST00000507909.1

SRPK1-209, Transcript of SRSF protein kinase 1, humanhuman

TSL 4

Gene SRPK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-209ENST00000507909 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
SRPK1-209ENST00000507909 C4BP0C0L5 1744 aa12.61□□□□□ -0.39
SRPK1-209ENST00000507909 NUP188Q5SRE5 1749 aa12.61□□□□□ -0.39
SRPK1-209ENST00000507909 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
SRPK1-209ENST00000507909 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
SRPK1-209ENST00000507909 KCNQ4P56696 695 aa12.6□□□□□ -0.39
SRPK1-209ENST00000507909 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
SRPK1-209ENST00000507909 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
SRPK1-209ENST00000507909 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
SRPK1-209ENST00000507909 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
SRPK1-209ENST00000507909 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
SRPK1-209ENST00000507909 VAMP4O75379 141 aa12.59□□□□□ -0.39
SRPK1-209ENST00000507909 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
SRPK1-209ENST00000507909 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
SRPK1-209ENST00000507909 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
SRPK1-209ENST00000507909 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
SRPK1-209ENST00000507909 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
SRPK1-209ENST00000507909 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
SRPK1-209ENST00000507909 AK7Q96M32 723 aa12.57□□□□□ -0.4
SRPK1-209ENST00000507909 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
SRPK1-209ENST00000507909 A1BGP04217 495 aa12.56□□□□□ -0.4
SRPK1-209ENST00000507909 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
SRPK1-209ENST00000507909 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
SRPK1-209ENST00000507909 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
SRPK1-209ENST00000507909 CHPF2Q9P2E5 772 aa12.56□□□□□ -0.4
SRPK1-209ENST00000507909 DBF4Q9UBU7 674 aaPredicted RBP12.56□□□□□ -0.4
SRPK1-209ENST00000507909 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
SRPK1-209ENST00000507909 GNPATO15228 680 aa12.55□□□□□ -0.4
SRPK1-209ENST00000507909 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
SRPK1-209ENST00000507909 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
SRPK1-209ENST00000507909 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
SRPK1-209ENST00000507909 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
SRPK1-209ENST00000507909 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
SRPK1-209ENST00000507909 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
SRPK1-209ENST00000507909 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
SRPK1-209ENST00000507909 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
SRPK1-209ENST00000507909 PDIA6Q15084 440 aa12.54□□□□□ -0.4
SRPK1-209ENST00000507909 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
SRPK1-209ENST00000507909 NBPF10Q6P3W6 841 aaKnown RBP12.54□□□□□ -0.4
SRPK1-209ENST00000507909 NBPF15Q8N660 670 aa12.54□□□□□ -0.4
SRPK1-209ENST00000507909 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
SRPK1-209ENST00000507909 HYPKQ9NX55 129 aa12.54□□□□□ -0.4
SRPK1-209ENST00000507909 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
SRPK1-209ENST00000507909 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
SRPK1-209ENST00000507909 SOCS7O14512 581 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 RPS6KA4O75676 772 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 MYL6BP14649 208 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 ADRA2BP18089 450 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 SSFA2P28290 1259 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
SRPK1-209ENST00000507909 RARSP54136 660 aaKnown RBP12.53□□□□□ -0.4
SRPK1-209ENST00000507909 ZNF827Q17R98 1081 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
SRPK1-209ENST00000507909 SSH1Q8WYL5 1049 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
SRPK1-209ENST00000507909 TCERG1O14776 1098 aaKnown RBP12.52□□□□□ -0.41
SRPK1-209ENST00000507909 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
SRPK1-209ENST00000507909 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
SRPK1-209ENST00000507909 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
SRPK1-209ENST00000507909 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
SRPK1-209ENST00000507909 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.41
SRPK1-209ENST00000507909 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.41
SRPK1-209ENST00000507909 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.41
SRPK1-209ENST00000507909 COL15A1P39059 1388 aa12.52□□□□□ -0.41
SRPK1-209ENST00000507909 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
SRPK1-209ENST00000507909 A0A087WZG4 1122 aa12.51□□□□□ -0.41
SRPK1-209ENST00000507909 ANXA1P04083 346 aa12.51□□□□□ -0.41
SRPK1-209ENST00000507909 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
SRPK1-209ENST00000507909 MRPL50Q8N5N7 158 aaKnown RBP12.51□□□□□ -0.41
SRPK1-209ENST00000507909 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
SRPK1-209ENST00000507909 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
SRPK1-209ENST00000507909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
SRPK1-209ENST00000507909 PHF14O94880 888 aa12.5□□□□□ -0.41
SRPK1-209ENST00000507909 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
SRPK1-209ENST00000507909 AMIGO3Q86WK7 504 aa12.5□□□□□ -0.41
SRPK1-209ENST00000507909 KIF16BQ96L93 1317 aa12.5□□□□□ -0.41
SRPK1-209ENST00000507909 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
SRPK1-209ENST00000507909 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
SRPK1-209ENST00000507909 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
SRPK1-209ENST00000507909 FLIIQ13045 1269 aa12.49□□□□□ -0.41
SRPK1-209ENST00000507909 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
SRPK1-209ENST00000507909 COPS6Q7L5N1 327 aa12.49□□□□□ -0.41
SRPK1-209ENST00000507909 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
SRPK1-209ENST00000507909 XAGE3Q8WTP9 111 aa12.49□□□□□ -0.41
SRPK1-209ENST00000507909 PHAXQ9H814 394 aaKnown RBP12.49□□□□□ -0.41
SRPK1-209ENST00000507909 PTPRCP08575 1304 aa12.48□□□□□ -0.41
SRPK1-209ENST00000507909 BCAR3O75815 825 aa12.48□□□□□ -0.41
SRPK1-209ENST00000507909 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
SRPK1-209ENST00000507909 RFC4P35249 363 aa12.48□□□□□ -0.41
SRPK1-209ENST00000507909 AIMP1Q12904 312 aaKnown RBP12.48□□□□□ -0.41
SRPK1-209ENST00000507909 G2E3Q7L622 706 aa12.48□□□□□ -0.41
SRPK1-209ENST00000507909 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
SRPK1-209ENST00000507909 MAP3K15Q6ZN16 1313 aa12.47□□□□□ -0.41
SRPK1-209ENST00000507909 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
SRPK1-209ENST00000507909 RGL2O15211 777 aa12.47□□□□□ -0.41
SRPK1-209ENST00000507909 ZPR1O75312 459 aa12.47□□□□□ -0.41
SRPK1-209ENST00000507909 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
SRPK1-209ENST00000507909 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
SRPK1-209ENST00000507909 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms