RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ZCRB1Q8TBF4 217 aaKnown RBP27.53■■■□□ 2
RNF4-207ENST00000506706 BCL11AQ9H165 835 aa27.53■■■□□ 2
RNF4-207ENST00000506706 C5P01031 1676 aa27.53■■■□□ 2
RNF4-207ENST00000506706 GSPT1P15170 499 aaKnown RBP27.53■■■□□ 2
RNF4-207ENST00000506706 CABP4P57796 275 aa27.53■■■□□ 2
RNF4-207ENST00000506706 MAP3K2Q9Y2U5 619 aa27.52■■■□□ 2
RNF4-207ENST00000506706 EXOC6BQ9Y2D4 811 aa27.52■■■□□ 2
RNF4-207ENST00000506706 DDX58O95786 925 aaKnown RBP27.51■■□□□ 1.99
RNF4-207ENST00000506706 EVA1CP58658 441 aa27.51■■□□□ 1.99
RNF4-207ENST00000506706 OTUD7AQ8TE49 926 aaPredicted RBP27.51■■□□□ 1.99
RNF4-207ENST00000506706 ZNF496Q96IT1 587 aaPredicted RBP27.51■■□□□ 1.99
RNF4-207ENST00000506706 CDC45O75419 566 aa27.5■■□□□ 1.99
RNF4-207ENST00000506706 IL2RBP14784 551 aa27.5■■□□□ 1.99
RNF4-207ENST00000506706 PDIA6Q15084 440 aa27.5■■□□□ 1.99
RNF4-207ENST00000506706 ALDH1L1O75891 902 aa27.5■■□□□ 1.99
RNF4-207ENST00000506706 TBC1D9Q6ZT07 1266 aa27.5■■□□□ 1.99
RNF4-207ENST00000506706 STRN4Q9NRL3 753 aa27.5■■□□□ 1.99
RNF4-207ENST00000506706 FMNL2Q96PY5 1086 aa27.49■■□□□ 1.99
RNF4-207ENST00000506706 LRRCC1Q9C099 1032 aa27.49■■□□□ 1.99
RNF4-207ENST00000506706 IBTKQ9P2D0 1353 aaPredicted RBP27.49■■□□□ 1.99
RNF4-207ENST00000506706 SNRPA1P09661 255 aaKnown RBP27.48■■□□□ 1.99
RNF4-207ENST00000506706 NBPF7P0C2Y1 421 aaPredicted RBP27.48■■□□□ 1.99
RNF4-207ENST00000506706 SSH3Q8TE77 659 aa27.48■■□□□ 1.99
RNF4-207ENST00000506706 LARP1Q6PKG0 1096 aaKnown RBP27.48■■□□□ 1.99
RNF4-207ENST00000506706 MYT1Q01538 1121 aa27.47■■□□□ 1.99
RNF4-207ENST00000506706 EIF5BO60841 1220 aaKnown RBP27.46■■□□□ 1.99
RNF4-207ENST00000506706 PPP1R42Q7Z4L9 355 aa27.46■■□□□ 1.99
RNF4-207ENST00000506706 OSBPL3Q9H4L5 887 aa27.46■■□□□ 1.99
RNF4-207ENST00000506706 POLA2Q14181 598 aa27.45■■□□□ 1.99
RNF4-207ENST00000506706 NBR1Q14596 966 aa27.45■■□□□ 1.99
RNF4-207ENST00000506706 RBM25P49756 843 aaKnown RBP27.45■■□□□ 1.98
RNF4-207ENST00000506706 ERVV-2B6SEH9 535 aa27.44■■□□□ 1.98
RNF4-207ENST00000506706 AIMP1Q12904 312 aaKnown RBP27.44■■□□□ 1.98
RNF4-207ENST00000506706 NKX1-1Q15270 411 aaPredicted RBP27.44■■□□□ 1.98
RNF4-207ENST00000506706 LINS1Q8NG48 757 aa27.44■■□□□ 1.98
RNF4-207ENST00000506706 C9orf78Q9NZ63 289 aaPredicted RBP27.44■■□□□ 1.98
RNF4-207ENST00000506706 HDAC5Q9UQL6 1122 aa27.44■■□□□ 1.98
RNF4-207ENST00000506706 ROBO1Q9Y6N7 1651 aa27.43■■□□□ 1.98
RNF4-207ENST00000506706 MYL6BP14649 208 aa27.42■■□□□ 1.98
RNF4-207ENST00000506706 PDE1AP54750 535 aa27.42■■□□□ 1.98
RNF4-207ENST00000506706 USP16Q9Y5T5 823 aa27.42■■□□□ 1.98
RNF4-207ENST00000506706 SRGAP3O43295 1099 aa27.42■■□□□ 1.98
RNF4-207ENST00000506706 RAB11FIP3O75154 756 aa27.42■■□□□ 1.98
RNF4-207ENST00000506706 RIC3Q7Z5B4 369 aa27.41■■□□□ 1.98
RNF4-207ENST00000506706 SHANK3Q9BYB0 1731 aa27.41■■□□□ 1.98
RNF4-207ENST00000506706 SDSP20132 328 aa27.4■■□□□ 1.98
RNF4-207ENST00000506706 SALL3Q9BXA9 1300 aa27.4■■□□□ 1.98
RNF4-207ENST00000506706 CWF19L2Q2TBE0 894 aaKnown RBP27.4■■□□□ 1.98
RNF4-207ENST00000506706 DDX54Q8TDD1 881 aaKnown RBP27.39■■□□□ 1.98
RNF4-207ENST00000506706 XAGE3Q8WTP9 111 aa27.39■■□□□ 1.98
RNF4-207ENST00000506706 AHDC1Q5TGY3 1603 aaPredicted RBP27.39■■□□□ 1.98
RNF4-207ENST00000506706 LAMB4A4D0S4 1761 aa27.39■■□□□ 1.97
RNF4-207ENST00000506706 SURF6O75683 361 aaKnown RBP27.39■■□□□ 1.97
RNF4-207ENST00000506706 TBC1D2Q9BYX2 928 aa27.39■■□□□ 1.97
RNF4-207ENST00000506706 COPS6Q7L5N1 327 aa27.38■■□□□ 1.97
RNF4-207ENST00000506706 BTG4Q9NY30 223 aa27.38■■□□□ 1.97
RNF4-207ENST00000506706 MTX1Q13505 466 aa27.37■■□□□ 1.97
RNF4-207ENST00000506706 CASC1Q6TDU7 716 aa27.37■■□□□ 1.97
RNF4-207ENST00000506706 GLI3P10071 1580 aa27.37■■□□□ 1.97
RNF4-207ENST00000506706 COL14A1Q05707 1796 aaKnown RBP27.37■■□□□ 1.97
RNF4-207ENST00000506706 NEXNQ0ZGT2 675 aa27.37■■□□□ 1.97
RNF4-207ENST00000506706 UTYO14607 1347 aa27.36■■□□□ 1.97
RNF4-207ENST00000506706 GRM8O00222 908 aa27.36■■□□□ 1.97
RNF4-207ENST00000506706 MX1P20591 662 aa27.36■■□□□ 1.97
RNF4-207ENST00000506706 LRP10Q7Z4F1 713 aa27.36■■□□□ 1.97
RNF4-207ENST00000506706 HSP90AB4PQ58FF6 505 aa27.35■■□□□ 1.97
RNF4-207ENST00000506706 UBR2Q8IWV8 1755 aa27.35■■□□□ 1.97
RNF4-207ENST00000506706 COL22A1Q8NFW1 1626 aaPredicted RBP27.35■■□□□ 1.97
RNF4-207ENST00000506706 USP35Q9P2H5 1018 aa27.34■■□□□ 1.97
RNF4-207ENST00000506706 STAP2Q9UGK3 403 aa27.34■■□□□ 1.97
RNF4-207ENST00000506706 ANKRD13DQ6ZTN6 518 aa27.34■■□□□ 1.97
RNF4-207ENST00000506706 METTL22Q9BUU2 404 aaPredicted RBP27.34■■□□□ 1.97
RNF4-207ENST00000506706 PAPPAQ13219 1627 aa27.34■■□□□ 1.97
RNF4-207ENST00000506706 IGKV5-2P06315 115 aa27.33■■□□□ 1.97
RNF4-207ENST00000506706 RHPN1Q8TCX5 695 aa27.33■■□□□ 1.97
RNF4-207ENST00000506706 KIF1BPQ96EK5 621 aa27.33■■□□□ 1.97
RNF4-207ENST00000506706 LTBP4Q8N2S1 1624 aa27.33■■□□□ 1.97
RNF4-207ENST00000506706 ERBB4Q15303 1308 aa27.33■■□□□ 1.97
RNF4-207ENST00000506706 RTL5Q5HYW3 569 aaPredicted RBP27.32■■□□□ 1.96
RNF4-207ENST00000506706 IL1RAPL2Q9NP60 686 aa27.31■■□□□ 1.96
RNF4-207ENST00000506706 AOX1Q06278 1338 aa27.31■■□□□ 1.96
RNF4-207ENST00000506706 NEURL1BA8MQ27 555 aa27.31■■□□□ 1.96
RNF4-207ENST00000506706 MYD88Q99836 296 aa27.31■■□□□ 1.96
RNF4-207ENST00000506706 KCPQ6ZWJ8 1503 aa27.3■■□□□ 1.96
RNF4-207ENST00000506706 PIP4K2AP48426 406 aaPredicted RBP27.3■■□□□ 1.96
RNF4-207ENST00000506706 TSHZ3Q63HK5 1081 aa27.29■■□□□ 1.96
RNF4-207ENST00000506706 SUCLG2Q96I99 432 aa27.29■■□□□ 1.96
RNF4-207ENST00000506706 TUBGCP6Q96RT7 1819 aa27.29■■□□□ 1.96
RNF4-207ENST00000506706 GCKRQ14397 625 aa27.28■■□□□ 1.96
RNF4-207ENST00000506706 HSCBQ8IWL3 235 aa27.28■■□□□ 1.96
RNF4-207ENST00000506706 TNS2Q63HR2 1409 aa27.27■■□□□ 1.96
RNF4-207ENST00000506706 COL16A1Q07092 1604 aaPredicted RBP27.27■■□□□ 1.96
RNF4-207ENST00000506706 TOGARAM1Q9Y4F4 1720 aa27.27■■□□□ 1.96
RNF4-207ENST00000506706 OS9Q13438 667 aaPredicted RBP27.27■■□□□ 1.96
RNF4-207ENST00000506706 KIF2CQ99661 725 aa27.27■■□□□ 1.96
RNF4-207ENST00000506706 SNX21Q969T3 373 aa27.26■■□□□ 1.95
RNF4-207ENST00000506706 KAZALD1Q96I82 304 aa27.26■■□□□ 1.95
RNF4-207ENST00000506706 TMOD3Q9NYL9 352 aa27.26■■□□□ 1.95
RNF4-207ENST00000506706 ARFGEF2Q9Y6D5 1785 aa27.26■■□□□ 1.95
RNF4-207ENST00000506706 NUTM1Q86Y26 1132 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms