RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
CDK7-204ENST00000506563 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
CDK7-204ENST00000506563 STARD3NLO95772 234 aa16.4■□□□□ 0.22
CDK7-204ENST00000506563 A1BGP04217 495 aa16.4■□□□□ 0.22
CDK7-204ENST00000506563 BCL2L13Q9BXK5 485 aa16.4■□□□□ 0.22
CDK7-204ENST00000506563 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
CDK7-204ENST00000506563 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
CDK7-204ENST00000506563 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
CDK7-204ENST00000506563 ANXA1P04083 346 aa16.39■□□□□ 0.21
CDK7-204ENST00000506563 HOXB7P09629 217 aa16.39■□□□□ 0.21
CDK7-204ENST00000506563 CYP19A1P11511 503 aaPredicted RBP16.39■□□□□ 0.21
CDK7-204ENST00000506563 MYL6BP14649 208 aa16.39■□□□□ 0.21
CDK7-204ENST00000506563 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
CDK7-204ENST00000506563 CRKLP46109 303 aaKnown RBP16.39■□□□□ 0.21
CDK7-204ENST00000506563 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
CDK7-204ENST00000506563 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
CDK7-204ENST00000506563 CCDC30Q5VVM6 783 aa16.38■□□□□ 0.21
CDK7-204ENST00000506563 STK31Q9BXU1 1019 aa16.38■□□□□ 0.21
CDK7-204ENST00000506563 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
CDK7-204ENST00000506563 C4BP0C0L5 1744 aa16.37■□□□□ 0.21
CDK7-204ENST00000506563 AK7Q96M32 723 aa16.37■□□□□ 0.21
CDK7-204ENST00000506563 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
CDK7-204ENST00000506563 ZBTB1Q9Y2K1 713 aa16.37■□□□□ 0.21
CDK7-204ENST00000506563 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
CDK7-204ENST00000506563 RREB1Q92766 1687 aa16.37■□□□□ 0.21
CDK7-204ENST00000506563 GNPATO15228 680 aa16.36■□□□□ 0.21
CDK7-204ENST00000506563 PROSER3Q2NL68 480 aa16.36■□□□□ 0.21
CDK7-204ENST00000506563 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
CDK7-204ENST00000506563 ARXQ96QS3 562 aa16.36■□□□□ 0.21
CDK7-204ENST00000506563 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
CDK7-204ENST00000506563 NUP188Q5SRE5 1749 aa16.36■□□□□ 0.21
CDK7-204ENST00000506563 PHF14O94880 888 aa16.35■□□□□ 0.21
CDK7-204ENST00000506563 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
CDK7-204ENST00000506563 INTS5Q6P9B9 1019 aaKnown RBP16.35■□□□□ 0.21
CDK7-204ENST00000506563 SSH1Q8WYL5 1049 aa16.35■□□□□ 0.21
CDK7-204ENST00000506563 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
CDK7-204ENST00000506563 NBPF26B4DH59 902 aa16.34■□□□□ 0.21
CDK7-204ENST00000506563 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
CDK7-204ENST00000506563 RARSP54136 660 aaKnown RBP16.34■□□□□ 0.21
CDK7-204ENST00000506563 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
CDK7-204ENST00000506563 NBPF14Q5TI25 921 aa16.34■□□□□ 0.21
CDK7-204ENST00000506563 NBPF10Q6P3W6 841 aaKnown RBP16.34■□□□□ 0.21
CDK7-204ENST00000506563 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
CDK7-204ENST00000506563 NBPF15Q8N660 670 aa16.34■□□□□ 0.21
CDK7-204ENST00000506563 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
CDK7-204ENST00000506563 DBF4Q9UBU7 674 aaPredicted RBP16.34■□□□□ 0.21
CDK7-204ENST00000506563 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
CDK7-204ENST00000506563 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
CDK7-204ENST00000506563 BCAR3O75815 825 aa16.33■□□□□ 0.2
CDK7-204ENST00000506563 CENPBP07199 599 aaPredicted RBP16.33■□□□□ 0.2
CDK7-204ENST00000506563 PDIA6Q15084 440 aa16.33■□□□□ 0.2
CDK7-204ENST00000506563 ZNF827Q17R98 1081 aa16.33■□□□□ 0.2
CDK7-204ENST00000506563 STK32BQ9NY57 414 aa16.33■□□□□ 0.2
CDK7-204ENST00000506563 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
CDK7-204ENST00000506563 PHAXQ9H814 394 aaKnown RBP16.32■□□□□ 0.2
CDK7-204ENST00000506563 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
CDK7-204ENST00000506563 DDX21Q9NR30 783 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDK7-204ENST00000506563 TFCP2L1Q9NZI6 479 aa16.32■□□□□ 0.2
CDK7-204ENST00000506563 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
CDK7-204ENST00000506563 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
CDK7-204ENST00000506563 RC3H1Q5TC82 1133 aaKnown RBP16.31■□□□□ 0.2
CDK7-204ENST00000506563 G2E3Q7L622 706 aa16.31■□□□□ 0.2
CDK7-204ENST00000506563 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
CDK7-204ENST00000506563 XAGE3Q8WTP9 111 aa16.31■□□□□ 0.2
CDK7-204ENST00000506563 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
CDK7-204ENST00000506563 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
CDK7-204ENST00000506563 HYPKQ9NX55 129 aa16.31■□□□□ 0.2
CDK7-204ENST00000506563 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
CDK7-204ENST00000506563 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
CDK7-204ENST00000506563 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
CDK7-204ENST00000506563 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
CDK7-204ENST00000506563 COL15A1P39059 1388 aa16.29■□□□□ 0.2
CDK7-204ENST00000506563 IL6STP40189 918 aaPredicted RBP16.29■□□□□ 0.2
CDK7-204ENST00000506563 COPS6Q7L5N1 327 aa16.29■□□□□ 0.2
CDK7-204ENST00000506563 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
CDK7-204ENST00000506563 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
CDK7-204ENST00000506563 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
CDK7-204ENST00000506563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.28■□□□□ 0.2
CDK7-204ENST00000506563 EIF5P55010 431 aaKnown RBP16.28■□□□□ 0.2
CDK7-204ENST00000506563 FLIIQ13045 1269 aa16.28■□□□□ 0.2
CDK7-204ENST00000506563 FKBP5Q13451 457 aaPredicted RBP16.28■□□□□ 0.2
CDK7-204ENST00000506563 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
CDK7-204ENST00000506563 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
CDK7-204ENST00000506563 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
CDK7-204ENST00000506563 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
CDK7-204ENST00000506563 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
CDK7-204ENST00000506563 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
CDK7-204ENST00000506563 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.2
CDK7-204ENST00000506563 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
CDK7-204ENST00000506563 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
CDK7-204ENST00000506563 CACNA1FO60840 1977 aa16.26■□□□□ 0.19
CDK7-204ENST00000506563 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
CDK7-204ENST00000506563 A0A087WZG4 1122 aa16.25■□□□□ 0.19
CDK7-204ENST00000506563 PLIN1O60240 522 aa16.25■□□□□ 0.19
CDK7-204ENST00000506563 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
CDK7-204ENST00000506563 SSFA2P28290 1259 aa16.25■□□□□ 0.19
CDK7-204ENST00000506563 RFC4P35249 363 aa16.25■□□□□ 0.19
CDK7-204ENST00000506563 RIC3Q7Z5B4 369 aa16.25■□□□□ 0.19
CDK7-204ENST00000506563 SRP68Q9UHB9 627 aaKnown RBP16.25■□□□□ 0.19
CDK7-204ENST00000506563 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms