RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ZNF232Q9UNY5 417 aa10.59□□□□□ -0.71
NIPBL-205ENST00000505998 SERTM1A2A2V5 107 aa10.58□□□□□ -0.72
NIPBL-205ENST00000505998 ATP2B4P23634 1241 aa10.58□□□□□ -0.72
NIPBL-205ENST00000505998 TEAD4Q15561 434 aa10.58□□□□□ -0.72
NIPBL-205ENST00000505998 TIMMDC1Q9NPL8 285 aa10.58□□□□□ -0.72
NIPBL-205ENST00000505998 SLAIN2Q9P270 581 aa10.58□□□□□ -0.72
NIPBL-205ENST00000505998 NOS2P35228 1153 aa10.57□□□□□ -0.72
NIPBL-205ENST00000505998 OCLNQ16625 522 aa10.57□□□□□ -0.72
NIPBL-205ENST00000505998 ZNF787Q6DD87 383 aa10.57□□□□□ -0.72
NIPBL-205ENST00000505998 HOMEZQ8IX15 550 aa10.57□□□□□ -0.72
NIPBL-205ENST00000505998 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
NIPBL-205ENST00000505998 L3MBTL2Q969R5 705 aa10.57□□□□□ -0.72
NIPBL-205ENST00000505998 CXXC1Q9P0U4 656 aaPredicted RBP10.57□□□□□ -0.72
NIPBL-205ENST00000505998 PARP3Q9Y6F1 533 aa10.57□□□□□ -0.72
NIPBL-205ENST00000505998 FOXO3O43524 673 aa10.56□□□□□ -0.72
NIPBL-205ENST00000505998 PTSQ03393 145 aa10.56□□□□□ -0.72
NIPBL-205ENST00000505998 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
NIPBL-205ENST00000505998 ZDHHC1Q8WTX9 485 aa10.56□□□□□ -0.72
NIPBL-205ENST00000505998 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
NIPBL-205ENST00000505998 AIDAQ96BJ3 306 aa10.56□□□□□ -0.72
NIPBL-205ENST00000505998 NBPF1Q3BBV0 1214 aa10.55□□□□□ -0.72
NIPBL-205ENST00000505998 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
NIPBL-205ENST00000505998 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
NIPBL-205ENST00000505998 A0A1B0GTH6 734 aa10.54□□□□□ -0.72
NIPBL-205ENST00000505998 EML1O00423 815 aa10.54□□□□□ -0.72
NIPBL-205ENST00000505998 FKBP5Q13451 457 aaPredicted RBP10.54□□□□□ -0.72
NIPBL-205ENST00000505998 DYRK1BQ9Y463 629 aa10.54□□□□□ -0.72
NIPBL-205ENST00000505998 PDIA4P13667 645 aaKnown RBP10.53□□□□□ -0.72
NIPBL-205ENST00000505998 SSFA2P28290 1259 aa10.53□□□□□ -0.72
NIPBL-205ENST00000505998 SH3PXD2AQ5TCZ1 1133 aa10.53□□□□□ -0.72
NIPBL-205ENST00000505998 GAS2L1Q99501 681 aaPredicted RBP10.53□□□□□ -0.72
NIPBL-205ENST00000505998 SENP3-EIF4A1A0A087X0R7 540 aa10.52□□□□□ -0.73
NIPBL-205ENST00000505998 SLC35F4A4IF30 521 aa10.52□□□□□ -0.73
NIPBL-205ENST00000505998 HIRAP54198 1017 aaPredicted RBP10.52□□□□□ -0.73
NIPBL-205ENST00000505998 TRAIPQ9BWF2 469 aa10.52□□□□□ -0.73
NIPBL-205ENST00000505998 HCN4Q9Y3Q4 1203 aa10.52□□□□□ -0.73
NIPBL-205ENST00000505998 TATP17735 454 aaPredicted RBP10.51□□□□□ -0.73
NIPBL-205ENST00000505998 TXLNAP40222 546 aa10.51□□□□□ -0.73
NIPBL-205ENST00000505998 POTEAQ6S8J7 498 aa10.51□□□□□ -0.73
NIPBL-205ENST00000505998 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
NIPBL-205ENST00000505998 MKNK1Q9BUB5 465 aa10.51□□□□□ -0.73
NIPBL-205ENST00000505998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.73
NIPBL-205ENST00000505998 ZDHHC3Q9NYG2 299 aa10.51□□□□□ -0.73
NIPBL-205ENST00000505998 MSX1P28360 303 aa10.5□□□□□ -0.73
NIPBL-205ENST00000505998 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
NIPBL-205ENST00000505998 GPAMQ9HCL2 828 aa10.5□□□□□ -0.73
NIPBL-205ENST00000505998 PTCD1O75127 700 aaKnown RBP10.49□□□□□ -0.73
NIPBL-205ENST00000505998 F11P03951 625 aa10.49□□□□□ -0.73
NIPBL-205ENST00000505998 RIPOR1Q6ZS17 1223 aa10.49□□□□□ -0.73
NIPBL-205ENST00000505998 NGLY1Q96IV0 654 aa10.49□□□□□ -0.73
NIPBL-205ENST00000505998 PHACTR1Q9C0D0 580 aa10.49□□□□□ -0.73
NIPBL-205ENST00000505998 PHLDB3Q6NSJ2 640 aa10.48□□□□□ -0.73
NIPBL-205ENST00000505998 ALDH16A1Q8IZ83 802 aa10.48□□□□□ -0.73
NIPBL-205ENST00000505998 BRD1O95696 1058 aa10.47□□□□□ -0.73
NIPBL-205ENST00000505998 ATP4AP20648 1035 aa10.47□□□□□ -0.73
NIPBL-205ENST00000505998 ARSJQ5FYB0 599 aaPredicted RBP10.47□□□□□ -0.73
NIPBL-205ENST00000505998 C1orf53Q5VUE5 145 aa10.47□□□□□ -0.73
NIPBL-205ENST00000505998 BICDL1Q6ZP65 573 aa10.47□□□□□ -0.73
NIPBL-205ENST00000505998 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
NIPBL-205ENST00000505998 COL26A1Q96A83 441 aa10.47□□□□□ -0.73
NIPBL-205ENST00000505998 PPFIA3O75145 1194 aa10.46□□□□□ -0.73
NIPBL-205ENST00000505998 RHPN1Q8TCX5 695 aa10.46□□□□□ -0.73
NIPBL-205ENST00000505998 RUBCNLQ9H714 662 aa10.46□□□□□ -0.73
NIPBL-205ENST00000505998 NXF1Q9UBU9 619 aaKnown RBP10.46□□□□□ -0.73
NIPBL-205ENST00000505998 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
NIPBL-205ENST00000505998 ITGA6P23229 1130 aa10.45□□□□□ -0.74
NIPBL-205ENST00000505998 SCNN1AP37088 669 aa10.45□□□□□ -0.74
NIPBL-205ENST00000505998 H7C1W4 665 aa10.44□□□□□ -0.74
NIPBL-205ENST00000505998 NAA30Q147X3 362 aaPredicted RBP10.44□□□□□ -0.74
NIPBL-205ENST00000505998 RTN1Q16799 776 aa10.44□□□□□ -0.74
NIPBL-205ENST00000505998 CAPN12Q6ZSI9 719 aa10.44□□□□□ -0.74
NIPBL-205ENST00000505998 ARID4AP29374 1257 aaPredicted RBP10.43□□□□□ -0.74
NIPBL-205ENST00000505998 EFHC2Q5JST6 749 aa10.43□□□□□ -0.74
NIPBL-205ENST00000505998 ZIC5Q96T25 663 aa10.43□□□□□ -0.74
NIPBL-205ENST00000505998 CRISPLD1Q9H336 500 aa10.43□□□□□ -0.74
NIPBL-205ENST00000505998 QTRT2Q9H974 415 aaKnown RBP10.43□□□□□ -0.74
NIPBL-205ENST00000505998 NEUROD4Q9HD90 331 aa10.43□□□□□ -0.74
NIPBL-205ENST00000505998 SEPT3Q9UH03 358 aa10.43□□□□□ -0.74
NIPBL-205ENST00000505998 GPC6Q9Y625 555 aaPredicted RBP10.43□□□□□ -0.74
NIPBL-205ENST00000505998 GJA3Q9Y6H8 435 aa10.43□□□□□ -0.74
NIPBL-205ENST00000505998 A0A1W2PNR3 127 aa10.42□□□□□ -0.74
NIPBL-205ENST00000505998 C16orf46Q6P387 395 aa10.42□□□□□ -0.74
NIPBL-205ENST00000505998 MYO19Q96H55 970 aa10.42□□□□□ -0.74
NIPBL-205ENST00000505998 NUCKS1Q9H1E3 243 aaKnown RBP10.42□□□□□ -0.74
NIPBL-205ENST00000505998 CUEDC1Q9NWM3 386 aaPredicted RBP10.42□□□□□ -0.74
NIPBL-205ENST00000505998 VEGFBP49765 207 aa10.41□□□□□ -0.74
NIPBL-205ENST00000505998 LBRQ14739 615 aaKnown RBP10.41□□□□□ -0.74
NIPBL-205ENST00000505998 HIF1AQ16665 826 aa10.41□□□□□ -0.74
NIPBL-205ENST00000505998 NPAS3Q8IXF0 933 aa10.41□□□□□ -0.74
NIPBL-205ENST00000505998 TRIM22Q8IYM9 498 aa10.41□□□□□ -0.74
NIPBL-205ENST00000505998 C7orf43Q8WVR3 580 aa10.41□□□□□ -0.74
NIPBL-205ENST00000505998 GMCL1Q96IK5 515 aa10.41□□□□□ -0.74
NIPBL-205ENST00000505998 CDC14CA4D256 554 aa10.4□□□□□ -0.74
NIPBL-205ENST00000505998 DBN1Q16643 649 aa10.4□□□□□ -0.74
NIPBL-205ENST00000505998 COX20Q5RI15 118 aa10.4□□□□□ -0.74
NIPBL-205ENST00000505998 SAP130Q9H0E3 1048 aa10.4□□□□□ -0.74
NIPBL-205ENST00000505998 ANKIB1Q9P2G1 1089 aa10.4□□□□□ -0.74
NIPBL-205ENST00000505998 DGKZQ13574 1117 aa10.39□□□□□ -0.75
NIPBL-205ENST00000505998 LRRC69Q6ZNQ3 347 aa10.39□□□□□ -0.75
NIPBL-205ENST00000505998 NLRP8Q86W28 1048 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms