RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 FCHSD2O94868 740 aa27.43■■□□□ 1.98
TRIO-207ENST00000505971 ZNF526Q8TF50 670 aaPredicted RBP27.43■■□□□ 1.98
TRIO-207ENST00000505971 PIM2Q9P1W9 311 aa27.43■■□□□ 1.98
TRIO-207ENST00000505971 GNAT3A8MTJ3 354 aa27.42■■□□□ 1.98
TRIO-207ENST00000505971 BCL2L12Q9HB09 334 aa27.42■■□□□ 1.98
TRIO-207ENST00000505971 COL15A1P39059 1388 aa27.42■■□□□ 1.98
TRIO-207ENST00000505971 KIF3CO14782 793 aa27.41■■□□□ 1.98
TRIO-207ENST00000505971 ARHGAP27Q6ZUM4 889 aa27.41■■□□□ 1.98
TRIO-207ENST00000505971 AFDNP55196 1824 aaKnown RBP27.41■■□□□ 1.98
TRIO-207ENST00000505971 NRXN2Q9P2S2 1712 aa27.41■■□□□ 1.98
TRIO-207ENST00000505971 CNGB1Q14028 1251 aaPredicted RBP27.4■■□□□ 1.98
TRIO-207ENST00000505971 NFIXQ14938 502 aa27.4■■□□□ 1.98
TRIO-207ENST00000505971 CEMIPQ8WUJ3 1361 aa27.39■■□□□ 1.98
TRIO-207ENST00000505971 EIF5P55010 431 aaKnown RBP27.39■■□□□ 1.98
TRIO-207ENST00000505971 ZNF790Q6PG37 636 aa27.39■■□□□ 1.98
TRIO-207ENST00000505971 ZNF496Q96IT1 587 aaPredicted RBP27.39■■□□□ 1.98
TRIO-207ENST00000505971 PHACTR3Q96KR7 559 aa27.39■■□□□ 1.98
TRIO-207ENST00000505971 TTC5Q8N0Z6 440 aa27.38■■□□□ 1.97
TRIO-207ENST00000505971 RSPH6AQ9H0K4 717 aa27.38■■□□□ 1.97
TRIO-207ENST00000505971 STARD3NLO95772 234 aa27.37■■□□□ 1.97
TRIO-207ENST00000505971 TEFQ10587 303 aa27.37■■□□□ 1.97
TRIO-207ENST00000505971 DALRD3Q5D0E6 543 aaKnown RBP27.37■■□□□ 1.97
TRIO-207ENST00000505971 HEG1Q9ULI3 1381 aa27.36■■□□□ 1.97
TRIO-207ENST00000505971 CHRNA5P30532 468 aa27.36■■□□□ 1.97
TRIO-207ENST00000505971 TEX13AQ9BXU3 409 aaPredicted RBP27.35■■□□□ 1.97
TRIO-207ENST00000505971 CANXP27824 592 aaKnown RBP27.34■■□□□ 1.97
TRIO-207ENST00000505971 PRKAR2BP31323 418 aa27.34■■□□□ 1.97
TRIO-207ENST00000505971 CFAP53Q96M91 514 aa27.34■■□□□ 1.97
TRIO-207ENST00000505971 HSPA6P17066 643 aa27.33■■□□□ 1.97
TRIO-207ENST00000505971 PPP2R1AP30153 589 aa27.33■■□□□ 1.97
TRIO-207ENST00000505971 SBF1O95248 1867 aa27.33■■□□□ 1.97
TRIO-207ENST00000505971 SERPINB2P05120 415 aa27.32■■□□□ 1.96
TRIO-207ENST00000505971 A0A087WZG4 1122 aa27.31■■□□□ 1.96
TRIO-207ENST00000505971 C9orf131Q5VYM1 1079 aa27.31■■□□□ 1.96
TRIO-207ENST00000505971 NUDCQ9Y266 331 aa27.3■■□□□ 1.96
TRIO-207ENST00000505971 DLEC1Q9Y238 1755 aa27.3■■□□□ 1.96
TRIO-207ENST00000505971 IL6STP40189 918 aaPredicted RBP27.29■■□□□ 1.96
TRIO-207ENST00000505971 FMNL2Q96PY5 1086 aa27.29■■□□□ 1.96
TRIO-207ENST00000505971 KCNQ3O43525 872 aa27.28■■□□□ 1.96
TRIO-207ENST00000505971 BTBD11A6QL63 1104 aa27.26■■□□□ 1.95
TRIO-207ENST00000505971 TOMM70O94826 608 aa27.26■■□□□ 1.95
TRIO-207ENST00000505971 SCN7AQ01118 1682 aa27.25■■□□□ 1.95
TRIO-207ENST00000505971 U2AF1L5P0DN76 240 aaPredicted RBP27.25■■□□□ 1.95
TRIO-207ENST00000505971 U2AF1Q01081 240 aaKnown RBP eCLIP27.25■■□□□ 1.95
TRIO-207ENST00000505971 NMRK2Q9NPI5 230 aa27.25■■□□□ 1.95
TRIO-207ENST00000505971 CARMIL3Q8ND23 1372 aa27.24■■□□□ 1.95
TRIO-207ENST00000505971 A1BGP04217 495 aa27.24■■□□□ 1.95
TRIO-207ENST00000505971 TBC1D9BQ66K14 1250 aa27.24■■□□□ 1.95
TRIO-207ENST00000505971 TBC1D2BQ9UPU7 963 aa27.23■■□□□ 1.95
TRIO-207ENST00000505971 ANKRD31Q8N7Z5 1873 aa27.23■■□□□ 1.95
TRIO-207ENST00000505971 HTATSF1O43719 755 aaKnown RBP27.21■■□□□ 1.95
TRIO-207ENST00000505971 BICDL1Q6ZP65 573 aa27.21■■□□□ 1.95
TRIO-207ENST00000505971 TTLL6Q8N841 843 aa27.21■■□□□ 1.95
TRIO-207ENST00000505971 RNF181Q9P0P0 153 aa27.21■■□□□ 1.95
TRIO-207ENST00000505971 USP16Q9Y5T5 823 aa27.21■■□□□ 1.95
TRIO-207ENST00000505971 H0YIN7 160 aa27.2■■□□□ 1.94
TRIO-207ENST00000505971 CAMTA2O94983 1202 aa27.2■■□□□ 1.94
TRIO-207ENST00000505971 MCM10Q7L590 875 aa27.2■■□□□ 1.94
TRIO-207ENST00000505971 C2CD5Q86YS7 1000 aa27.2■■□□□ 1.94
TRIO-207ENST00000505971 BRIP1Q9BX63 1249 aa27.19■■□□□ 1.94
TRIO-207ENST00000505971 PRELPP51888 382 aa27.18■■□□□ 1.94
TRIO-207ENST00000505971 PRR5LQ6MZQ0 368 aa27.18■■□□□ 1.94
TRIO-207ENST00000505971 RTF1Q92541 710 aaKnown RBP27.18■■□□□ 1.94
TRIO-207ENST00000505971 PDZRN3Q9UPQ7 1066 aa27.18■■□□□ 1.94
TRIO-207ENST00000505971 ZC3H4Q9UPT8 1303 aaKnown RBP27.17■■□□□ 1.94
TRIO-207ENST00000505971 BCORQ6W2J9 1755 aa27.17■■□□□ 1.94
TRIO-207ENST00000505971 PRAMEF22A3QJZ6 481 aa27.16■■□□□ 1.94
TRIO-207ENST00000505971 SNRPA1P09661 255 aaKnown RBP27.16■■□□□ 1.94
TRIO-207ENST00000505971 ZNF330Q9Y3S2 320 aaPredicted RBP27.16■■□□□ 1.94
TRIO-207ENST00000505971 KDM2BQ8NHM5 1336 aa27.16■■□□□ 1.94
TRIO-207ENST00000505971 CCDC88AQ3V6T2 1871 aa27.15■■□□□ 1.94
TRIO-207ENST00000505971 RASSF7Q02833 373 aa27.15■■□□□ 1.94
TRIO-207ENST00000505971 DCTN1Q14203 1278 aa27.15■■□□□ 1.94
TRIO-207ENST00000505971 RBM46Q8TBY0 533 aaKnown RBP27.15■■□□□ 1.94
TRIO-207ENST00000505971 LMNB1P20700 586 aa27.14■■□□□ 1.94
TRIO-207ENST00000505971 PDE6BP35913 854 aa27.14■■□□□ 1.94
TRIO-207ENST00000505971 DZIP3Q86Y13 1208 aaKnown RBP27.14■■□□□ 1.94
TRIO-207ENST00000505971 SETDB2Q96T68 719 aa27.14■■□□□ 1.94
TRIO-207ENST00000505971 APLP1P51693 650 aa27.13■■□□□ 1.93
TRIO-207ENST00000505971 CLEC4GQ6UXB4 293 aa27.13■■□□□ 1.93
TRIO-207ENST00000505971 COL11A2P13942 1736 aaPredicted RBP27.13■■□□□ 1.93
TRIO-207ENST00000505971 NFKBIEO00221 500 aa27.12■■□□□ 1.93
TRIO-207ENST00000505971 TAF7Q15545 349 aaPredicted RBP27.12■■□□□ 1.93
TRIO-207ENST00000505971 NPM2Q86SE8 214 aaKnown RBP27.12■■□□□ 1.93
TRIO-207ENST00000505971 DLG5Q8TDM6 1919 aa27.12■■□□□ 1.93
TRIO-207ENST00000505971 TNRC6CQ9HCJ0 1690 aaKnown RBP27.11■■□□□ 1.93
TRIO-207ENST00000505971 NBPF26B4DH59 902 aa27.11■■□□□ 1.93
TRIO-207ENST00000505971 RGL2O15211 777 aa27.11■■□□□ 1.93
TRIO-207ENST00000505971 NBPF10Q6P3W6 841 aaKnown RBP27.11■■□□□ 1.93
TRIO-207ENST00000505971 NBPF15Q8N660 670 aa27.11■■□□□ 1.93
TRIO-207ENST00000505971 PIP4K2AP48426 406 aaPredicted RBP27.1■■□□□ 1.93
TRIO-207ENST00000505971 CCDC24Q8N4L8 307 aa27.1■■□□□ 1.93
TRIO-207ENST00000505971 DNAJC5GQ8N7S2 189 aa27.1■■□□□ 1.93
TRIO-207ENST00000505971 PLEKHF1Q96S99 279 aa27.1■■□□□ 1.93
TRIO-207ENST00000505971 RRAGCQ9HB90 399 aa27.1■■□□□ 1.93
TRIO-207ENST00000505971 FER1L6Q2WGJ9 1857 aa27.1■■□□□ 1.93
TRIO-207ENST00000505971 CNBD1Q8NA66 436 aa27.09■■□□□ 1.93
TRIO-207ENST00000505971 FSTL1Q12841 308 aa27.08■■□□□ 1.93
TRIO-207ENST00000505971 ZNF622Q969S3 477 aaKnown RBP eCLIP27.08■■□□□ 1.93
TRIO-207ENST00000505971 GLTPD2A6NH11 291 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms